Protein–RNA interactions for Protein: P43378

PTPN9, Tyrosine-protein phosphatase non-receptor type 9, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9P43378 SNORA33.1-201ENST00000364957 130 ntBASIC-0.39□□□□□ -2.47
PTPN9P43378 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.39□□□□□ -2.47
PTPN9P43378 RNU6-1133P-201ENST00000410963 100 ntBASIC-0.39□□□□□ -2.47
PTPN9P43378 AC096531.1-201ENST00000419107 107 ntBASIC-0.39□□□□□ -2.47
PTPN9P43378 RNU6-303P-201ENST00000517091 106 ntBASIC-0.39□□□□□ -2.47
PTPN9P43378 AP001180.6-201ENST00000584918 159 ntBASIC-0.39□□□□□ -2.47
PTPN9P43378 AL391099.1-201ENST00000624635 187 ntBASIC-0.39□□□□□ -2.47
PTPN9P43378 U6.96-201ENST00000636425 70 ntBASIC-0.39□□□□□ -2.47
PTPN9P43378 MIRLET7B-201ENST00000385140 83 ntBASIC-0.4□□□□□ -2.47
PTPN9P43378 MIR196A2-201ENST00000385189 110 ntBASIC-0.4□□□□□ -2.47
PTPN9P43378 MIR4432-201ENST00000581823 84 ntBASIC-0.4□□□□□ -2.47
PTPN9P43378 MIR5588-201ENST00000581890 63 ntBASIC-0.4□□□□□ -2.47
PTPN9P43378 MIRLET7A1-201ENST00000362295 80 ntBASIC-0.41□□□□□ -2.48
PTPN9P43378 RNU6-973P-201ENST00000364690 107 ntBASIC-0.41□□□□□ -2.48
PTPN9P43378 RNU6-294P-201ENST00000364999 102 ntBASIC-0.41□□□□□ -2.48
PTPN9P43378 RNU6-979P-201ENST00000383896 107 ntBASIC-0.41□□□□□ -2.48
PTPN9P43378 MIR1265-201ENST00000408444 86 ntBASIC-0.41□□□□□ -2.48
PTPN9P43378 MIR4636-201ENST00000582271 80 ntBASIC-0.41□□□□□ -2.48
PTPN9P43378 AC093726.3-201ENST00000637588 150 ntBASIC-0.41□□□□□ -2.48
PTPN9P43378 Y_RNA.73-201ENST00000362910 113 ntBASIC-0.42□□□□□ -2.48
PTPN9P43378 Y_RNA.178-201ENST00000363832 102 ntBASIC-0.42□□□□□ -2.48
PTPN9P43378 MIR450A2-201ENST00000385022 100 ntBASIC-0.42□□□□□ -2.48
PTPN9P43378 SNORD126-201ENST00000459475 77 ntBASIC-0.42□□□□□ -2.48
PTPN9P43378 MIR5582-201ENST00000579697 68 ntBASIC-0.42□□□□□ -2.48
PTPN9P43378 RNU6-380P-201ENST00000410207 107 ntBASIC-0.43□□□□□ -2.48
PTPN9P43378 MIR6739-201ENST00000622461 75 ntBASIC-0.43□□□□□ -2.48
PTPN9P43378 snoR1.1-201ENST00000628177 80 ntBASIC-0.43□□□□□ -2.48
PTPN9P43378 RNU6-315P-201ENST00000362666 107 ntBASIC-0.44□□□□□ -2.48
PTPN9P43378 RNU6-478P-201ENST00000363904 110 ntBASIC-0.44□□□□□ -2.48
PTPN9P43378 SNORD14C-201ENST00000365382 88 ntBASIC-0.44□□□□□ -2.48
PTPN9P43378 AC074348.1-201ENST00000426503 132 ntBASIC-0.44□□□□□ -2.48
PTPN9P43378 RNU7-171P-201ENST00000459581 62 ntBASIC-0.44□□□□□ -2.48
PTPN9P43378 MIR4493-201ENST00000584016 73 ntBASIC-0.44□□□□□ -2.48
PTPN9P43378 MIR4436A-201ENST00000585278 85 ntBASIC-0.44□□□□□ -2.48
PTPN9P43378 MIR6851-201ENST00000617060 67 ntBASIC-0.44□□□□□ -2.48
PTPN9P43378 MIR1297-201ENST00000637311 77 ntBASIC-0.44□□□□□ -2.48
PTPN9P43378 RNU6-330P-201ENST00000363015 107 ntBASIC-0.45□□□□□ -2.48
PTPN9P43378 RNU6-1162P-201ENST00000384443 104 ntBASIC-0.45□□□□□ -2.48
PTPN9P43378 RNU6-1184P-201ENST00000384588 108 ntBASIC-0.45□□□□□ -2.48
PTPN9P43378 MIR521-2-201ENST00000384818 87 ntBASIC-0.45□□□□□ -2.48
PTPN9P43378 MIR204-201ENST00000385200 110 ntBASIC-0.45□□□□□ -2.48
PTPN9P43378 RNA5SP451-201ENST00000410588 110 ntBASIC-0.45□□□□□ -2.48
PTPN9P43378 RNU6-284P-201ENST00000411105 106 ntBASIC-0.45□□□□□ -2.48
PTPN9P43378 RNU6ATAC17P-201ENST00000516074 71 ntBASIC-0.45□□□□□ -2.48
PTPN9P43378 RNU6-758P-201ENST00000516292 89 ntBASIC-0.45□□□□□ -2.48
PTPN9P43378 MIR101-1-201ENST00000362265 75 ntBASIC-0.46□□□□□ -2.48
PTPN9P43378 SNORD115-23-201ENST00000364461 82 ntBASIC-0.46□□□□□ -2.48
PTPN9P43378 MIR604-201ENST00000384880 94 ntBASIC-0.46□□□□□ -2.48
PTPN9P43378 SNORA3B-201ENST00000391305 131 ntBASIC-0.46□□□□□ -2.48
PTPN9P43378 MIR1255B2-201ENST00000408618 67 ntBASIC-0.46□□□□□ -2.48
PTPN9P43378 MIR6854-201ENST00000614935 69 ntBASIC-0.46□□□□□ -2.48
PTPN9P43378 SNORA32.3-201ENST00000384772 121 ntBASIC-0.47□□□□□ -2.48
PTPN9P43378 RNA5SP170-201ENST00000517150 101 ntBASIC-0.47□□□□□ -2.48
PTPN9P43378 RNA5SP368-201ENST00000364298 116 ntBASIC-0.48□□□□□ -2.49
PTPN9P43378 Y_RNA.532-201ENST00000384590 113 ntBASIC-0.48□□□□□ -2.49
PTPN9P43378 SNORD22.1-201ENST00000516331 125 ntBASIC-0.48□□□□□ -2.49
PTPN9P43378 RNU6-807P-201ENST00000516805 107 ntBASIC-0.48□□□□□ -2.49
PTPN9P43378 MIR548AZ-201ENST00000616567 95 ntBASIC-0.48□□□□□ -2.49
PTPN9P43378 MIR6086-201ENST00000638065 55 ntBASIC-0.48□□□□□ -2.49
PTPN9P43378 RNU6-1298P-201ENST00000362456 101 ntBASIC-0.49□□□□□ -2.49
PTPN9P43378 RNU6-820P-201ENST00000384273 107 ntBASIC-0.49□□□□□ -2.49
PTPN9P43378 RNU6-721P-201ENST00000410155 105 ntBASIC-0.49□□□□□ -2.49
PTPN9P43378 RNA5SP25-201ENST00000410815 110 ntBASIC-0.49□□□□□ -2.49
PTPN9P43378 AC022137.1-201ENST00000483735 151 ntBASIC-0.49□□□□□ -2.49
PTPN9P43378 CYP3A54P-201ENST00000566950 75 ntBASIC-0.49□□□□□ -2.49
PTPN9P43378 MIR4484-201ENST00000582855 83 ntBASIC-0.49□□□□□ -2.49
PTPN9P43378 AL353803.5-201ENST00000599815 141 ntBASIC-0.49□□□□□ -2.49
PTPN9P43378 Y_RNA.219-201ENST00000364232 113 ntBASIC-0.5□□□□□ -2.49
PTPN9P43378 RNU6-242P-201ENST00000384359 107 ntBASIC-0.5□□□□□ -2.49
PTPN9P43378 MIR124-2-201ENST00000385081 109 ntBASIC-0.5□□□□□ -2.49
PTPN9P43378 MIR3675-201ENST00000583661 73 ntBASIC-0.5□□□□□ -2.49
PTPN9P43378 Y_RNA.316-201ENST00000365118 111 ntBASIC-0.51□□□□□ -2.49
PTPN9P43378 SNORA13-201ENST00000458790 133 ntBASIC-0.51□□□□□ -2.49
PTPN9P43378 RNA5SP470-201ENST00000516463 106 ntBASIC-0.51□□□□□ -2.49
PTPN9P43378 SNORD75.1-201ENST00000408373 60 ntBASIC-0.52□□□□□ -2.49
PTPN9P43378 AP000533.3-201ENST00000447704 118 ntBASIC-0.52□□□□□ -2.49
PTPN9P43378 MIR3179-1-201ENST00000578940 84 ntBASIC-0.52□□□□□ -2.49
PTPN9P43378 MIR3179-2-201ENST00000579107 84 ntBASIC-0.52□□□□□ -2.49
PTPN9P43378 MIR3179-3-201ENST00000579566 84 ntBASIC-0.52□□□□□ -2.49
PTPN9P43378 MIR4464-201ENST00000580818 92 ntBASIC-0.52□□□□□ -2.49
PTPN9P43378 MIR3179-4-201ENST00000617599 84 ntBASIC-0.52□□□□□ -2.49
PTPN9P43378 MIR494-201ENST00000349529 81 ntBASIC-0.53□□□□□ -2.49
PTPN9P43378 SNORA8.1-201ENST00000384250 140 ntBASIC-0.53□□□□□ -2.49
PTPN9P43378 MIR224-201ENST00000384889 81 ntBASIC-0.53□□□□□ -2.49
PTPN9P43378 MIR517B-201ENST00000385102 67 ntBASIC-0.53□□□□□ -2.49
PTPN9P43378 AC108676.2-201ENST00000605225 163 ntBASIC-0.53□□□□□ -2.49
PTPN9P43378 MIR6888-201ENST00000621977 67 ntBASIC-0.53□□□□□ -2.49
PTPN9P43378 RNU6-1094P-201ENST00000362416 104 ntBASIC-0.54□□□□□ -2.5
PTPN9P43378 MIR518B-201ENST00000385127 83 ntBASIC-0.54□□□□□ -2.5
PTPN9P43378 RPS29P8-201ENST00000445109 171 ntBASIC-0.54□□□□□ -2.5
PTPN9P43378 RNU6-656P-201ENST00000516785 107 ntBASIC-0.54□□□□□ -2.5
PTPN9P43378 MIR1245B-201ENST00000636115 69 ntBASIC-0.54□□□□□ -2.5
PTPN9P43378 SNORD114-15-201ENST00000364687 72 ntBASIC-0.55□□□□□ -2.5
PTPN9P43378 Y_RNA.313-201ENST00000365095 103 ntBASIC-0.55□□□□□ -2.5
PTPN9P43378 RNU6-1276P-201ENST00000365372 104 ntBASIC-0.55□□□□□ -2.5
PTPN9P43378 SNORA62.4-201ENST00000365504 151 ntBASIC-0.55□□□□□ -2.5
PTPN9P43378 MIR519A2-201ENST00000384990 87 ntBASIC-0.55□□□□□ -2.5
PTPN9P43378 RNU6-604P-201ENST00000390917 100 ntBASIC-0.55□□□□□ -2.5
PTPN9P43378 RNU6-518P-201ENST00000516056 96 ntBASIC-0.55□□□□□ -2.5
PTPN9P43378 MIR548AG1-201ENST00000579932 66 ntBASIC-0.55□□□□□ -2.5
Retrieved 100 of 98,524 protein–RNA pairs in 171.6 ms