Protein–RNA interactions for Protein: P43235

CTSK, Cathepsin K, humanhuman

Predictions only

Length 329 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSKP43235 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC0.49□□□□□ -2.33
CTSKP43235 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.49□□□□□ -2.33
CTSKP43235 Y_RNA.340-201ENST00000365330 92 ntBASIC0.48□□□□□ -2.33
CTSKP43235 RNU6-542P-201ENST00000516405 103 ntBASIC0.48□□□□□ -2.33
CTSKP43235 AC103706.3-201ENST00000636297 85 ntBASIC0.48□□□□□ -2.33
CTSKP43235 RNA5SP62-201ENST00000363457 110 ntBASIC0.47□□□□□ -2.33
CTSKP43235 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC0.47□□□□□ -2.33
CTSKP43235 AC114737.2-201ENST00000421583 173 ntBASIC0.47□□□□□ -2.33
CTSKP43235 RNU6-175P-201ENST00000516896 107 ntBASIC0.47□□□□□ -2.33
CTSKP43235 MIR3925-201ENST00000584674 77 ntBASIC0.47□□□□□ -2.33
CTSKP43235 RNU6-302P-201ENST00000365249 107 ntBASIC0.46□□□□□ -2.34
CTSKP43235 RNU6-782P-201ENST00000516852 104 ntBASIC0.46□□□□□ -2.34
CTSKP43235 SCARNA11.2-201ENST00000517183 154 ntBASIC0.46□□□□□ -2.34
CTSKP43235 RNU6-1327P-201ENST00000365302 105 ntBASIC0.45□□□□□ -2.34
CTSKP43235 VTRNA1-3-201ENST00000365645 89 ntBASIC0.45□□□□□ -2.34
CTSKP43235 RNU6-815P-201ENST00000384080 113 ntBASIC0.45□□□□□ -2.34
CTSKP43235 MIR548C-201ENST00000384815 97 ntBASIC0.45□□□□□ -2.34
CTSKP43235 MIR4511-201ENST00000582784 87 ntBASIC0.45□□□□□ -2.34
CTSKP43235 AL109933.3-201ENST00000619095 188 ntBASIC0.45□□□□□ -2.34
CTSKP43235 RNU6-127P-201ENST00000390897 107 ntBASIC0.44□□□□□ -2.34
CTSKP43235 AC069113.3-201ENST00000521019 150 ntBASIC0.44□□□□□ -2.34
CTSKP43235 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.43□□□□□ -2.34
CTSKP43235 RNU6-1036P-201ENST00000383959 104 ntBASIC0.43□□□□□ -2.34
CTSKP43235 MIR106A-201ENST00000384870 81 ntBASIC0.43□□□□□ -2.34
CTSKP43235 RN7SL660P-201ENST00000614852 299 ntBASIC0.43□□□□□ -2.34
CTSKP43235 SNORA49-201ENST00000386157 136 ntBASIC0.42□□□□□ -2.34
CTSKP43235 U2.7-201ENST00000619197 100 ntBASIC0.42□□□□□ -2.34
CTSKP43235 RNA5SP299-201ENST00000391203 116 ntBASIC0.41□□□□□ -2.34
CTSKP43235 MIR1265-201ENST00000408444 86 ntBASIC0.41□□□□□ -2.34
CTSKP43235 MIR1197-201ENST00000408818 88 ntBASIC0.41□□□□□ -2.34
CTSKP43235 CYP3A54P-201ENST00000566950 75 ntBASIC0.41□□□□□ -2.34
CTSKP43235 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.41□□□□□ -2.34
CTSKP43235 SNORD115-25-201ENST00000362619 82 ntBASIC0.4□□□□□ -2.35
CTSKP43235 MIR517B-201ENST00000385102 67 ntBASIC0.4□□□□□ -2.35
CTSKP43235 MIR892B-201ENST00000401279 77 ntBASIC0.4□□□□□ -2.35
CTSKP43235 SNORA50A-201ENST00000384225 134 ntBASIC0.39□□□□□ -2.35
CTSKP43235 RNU6ATAC22P-201ENST00000516794 89 ntBASIC0.39□□□□□ -2.35
CTSKP43235 MIR6773-201ENST00000612812 74 ntBASIC0.39□□□□□ -2.35
CTSKP43235 MIR4315-1-201ENST00000636800 73 ntBASIC0.39□□□□□ -2.35
CTSKP43235 MIR4315-2-201ENST00000640925 73 ntBASIC0.39□□□□□ -2.35
CTSKP43235 AL021921.1-201ENST00000442774 93 ntBASIC0.38□□□□□ -2.35
CTSKP43235 AC108740.1-201ENST00000498629 225 ntBASIC0.38□□□□□ -2.35
CTSKP43235 RNU7-174P-201ENST00000516248 59 ntBASIC0.38□□□□□ -2.35
CTSKP43235 RNA5SP98-201ENST00000363158 137 ntBASIC0.37□□□□□ -2.35
CTSKP43235 RNU6-698P-201ENST00000363523 107 ntBASIC0.37□□□□□ -2.35
CTSKP43235 RNU6-34P-201ENST00000364874 107 ntBASIC0.37□□□□□ -2.35
CTSKP43235 MIR548V-201ENST00000584165 80 ntBASIC0.37□□□□□ -2.35
CTSKP43235 RNA5SP257-201ENST00000363023 116 ntBASIC0.36□□□□□ -2.35
CTSKP43235 SCARNA21.1-201ENST00000515996 128 ntBASIC0.36□□□□□ -2.35
CTSKP43235 RNU6-502P-201ENST00000362419 108 ntBASIC0.35□□□□□ -2.35
CTSKP43235 MIR643-201ENST00000385267 97 ntBASIC0.35□□□□□ -2.35
CTSKP43235 SNORD113-2-201ENST00000391082 72 ntBASIC0.35□□□□□ -2.35
CTSKP43235 RNU6-337P-201ENST00000391243 106 ntBASIC0.35□□□□□ -2.35
CTSKP43235 MIR2909-201ENST00000617113 69 ntBASIC0.35□□□□□ -2.35
CTSKP43235 MIR610-201ENST00000385139 96 ntBASIC0.34□□□□□ -2.36
CTSKP43235 MIRLET7B-201ENST00000385140 83 ntBASIC0.34□□□□□ -2.36
CTSKP43235 MIR1255B2-201ENST00000408618 67 ntBASIC0.34□□□□□ -2.36
CTSKP43235 RNA5SP470-201ENST00000516463 106 ntBASIC0.34□□□□□ -2.36
CTSKP43235 MIR4514-201ENST00000581410 57 ntBASIC0.34□□□□□ -2.36
CTSKP43235 AC090617.8-201ENST00000623339 167 ntBASIC0.34□□□□□ -2.36
CTSKP43235 RNU6-518P-201ENST00000516056 96 ntBASIC0.33□□□□□ -2.36
CTSKP43235 RNA5SP134-201ENST00000516492 96 ntBASIC0.33□□□□□ -2.36
CTSKP43235 MIR4743-201ENST00000584576 69 ntBASIC0.33□□□□□ -2.36
CTSKP43235 MIR6514-201ENST00000622549 70 ntBASIC0.33□□□□□ -2.36
CTSKP43235 SNORA62.5-201ENST00000516634 120 ntBASIC0.32□□□□□ -2.36
CTSKP43235 AP000676.1-201ENST00000533307 52 ntBASIC0.32□□□□□ -2.36
CTSKP43235 CR383656.4-201ENST00000546909 122 ntBASIC0.32□□□□□ -2.36
CTSKP43235 AC023932.2-201ENST00000603176 175 ntBASIC0.32□□□□□ -2.36
CTSKP43235 MIR148A-201ENST00000362215 68 ntBASIC0.31□□□□□ -2.36
CTSKP43235 MIR630-201ENST00000384957 97 ntBASIC0.31□□□□□ -2.36
CTSKP43235 RNU6-669P-201ENST00000365575 107 ntBASIC0.3□□□□□ -2.36
CTSKP43235 AC110620.1-201ENST00000416042 228 ntBASIC0.3□□□□□ -2.36
CTSKP43235 RNU7-154P-201ENST00000516194 62 ntBASIC0.3□□□□□ -2.36
CTSKP43235 RNU6-92P-201ENST00000605893 104 ntBASIC0.3□□□□□ -2.36
CTSKP43235 SNORA42.1-201ENST00000363515 137 ntBASIC0.29□□□□□ -2.36
CTSKP43235 SNORA25.5-201ENST00000363782 126 ntBASIC0.29□□□□□ -2.36
CTSKP43235 Y_RNA.246-201ENST00000364495 108 ntBASIC0.29□□□□□ -2.36
CTSKP43235 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC0.29□□□□□ -2.36
CTSKP43235 RNA5SP163-201ENST00000410304 99 ntBASIC0.29□□□□□ -2.36
CTSKP43235 RNU6-180P-201ENST00000516697 61 ntBASIC0.29□□□□□ -2.36
CTSKP43235 RNA5SP63-201ENST00000391225 112 ntBASIC0.28□□□□□ -2.36
CTSKP43235 U4.4-201ENST00000620626 117 ntBASIC0.28□□□□□ -2.36
CTSKP43235 MIR519A2-201ENST00000384990 87 ntBASIC0.27□□□□□ -2.37
CTSKP43235 MIR548H2-201ENST00000408874 88 ntBASIC0.27□□□□□ -2.37
CTSKP43235 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC0.27□□□□□ -2.37
CTSKP43235 Y_RNA.68-201ENST00000362881 102 ntBASIC0.26□□□□□ -2.37
CTSKP43235 RNU6-940P-201ENST00000363433 104 ntBASIC0.26□□□□□ -2.37
CTSKP43235 AC104408.1-201ENST00000605241 170 ntBASIC0.26□□□□□ -2.37
CTSKP43235 MIR9-2-201ENST00000384838 87 ntBASIC0.25□□□□□ -2.37
CTSKP43235 MIR6718-201ENST00000616153 80 ntBASIC0.25□□□□□ -2.37
CTSKP43235 RNA5SP214-201ENST00000363378 118 ntBASIC0.24□□□□□ -2.37
CTSKP43235 MIR593-201ENST00000384856 100 ntBASIC0.24□□□□□ -2.37
CTSKP43235 snoR1.1-201ENST00000628177 80 ntBASIC0.24□□□□□ -2.37
CTSKP43235 RNA5SP192-201ENST00000364404 120 ntBASIC0.23□□□□□ -2.37
CTSKP43235 RNU7-159P-201ENST00000459284 62 ntBASIC0.23□□□□□ -2.37
CTSKP43235 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.23□□□□□ -2.37
CTSKP43235 Y_RNA.74-201ENST00000362911 99 ntBASIC0.22□□□□□ -2.37
CTSKP43235 MIR145-201ENST00000384967 88 ntBASIC0.22□□□□□ -2.37
CTSKP43235 MIR5093-201ENST00000583199 100 ntBASIC0.22□□□□□ -2.37
CTSKP43235 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC0.22□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 15 ms