Protein–RNA interactions for Protein: P38606

ATP6V1A, V-type proton ATPase catalytic subunit A, humanhuman

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V1AP38606 MIR4698-201ENST00000577795 80 ntBASIC1.22□□□□□ -2.21
ATP6V1AP38606 MIR6773-201ENST00000612812 74 ntBASIC1.22□□□□□ -2.21
ATP6V1AP38606 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC1.22□□□□□ -2.21
ATP6V1AP38606 RNU4-88P-201ENST00000411220 86 ntBASIC1.21□□□□□ -2.22
ATP6V1AP38606 RN7SL793P-201ENST00000583259 296 ntBASIC1.21□□□□□ -2.22
ATP6V1AP38606 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
ATP6V1AP38606 MIR7110-201ENST00000612638 86 ntBASIC1.2□□□□□ -2.22
ATP6V1AP38606 RNU6-1232P-201ENST00000516299 86 ntBASIC1.19□□□□□ -2.22
ATP6V1AP38606 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.19□□□□□ -2.22
ATP6V1AP38606 RNU6-753P-201ENST00000363926 107 ntBASIC1.18□□□□□ -2.22
ATP6V1AP38606 MIR608-201ENST00000384820 100 ntBASIC1.18□□□□□ -2.22
ATP6V1AP38606 SNORA49-201ENST00000386157 136 ntBASIC1.18□□□□□ -2.22
ATP6V1AP38606 SNORD71-201ENST00000411292 86 ntBASIC1.18□□□□□ -2.22
ATP6V1AP38606 AC103810.9-201ENST00000606688 112 ntBASIC1.18□□□□□ -2.22
ATP6V1AP38606 SNORD115-25-201ENST00000362619 82 ntBASIC1.17□□□□□ -2.22
ATP6V1AP38606 MIR216A-201ENST00000385063 110 ntBASIC1.17□□□□□ -2.22
ATP6V1AP38606 RNU7-154P-201ENST00000516194 62 ntBASIC1.17□□□□□ -2.22
ATP6V1AP38606 RNA5SP470-201ENST00000516463 106 ntBASIC1.17□□□□□ -2.22
ATP6V1AP38606 RNU6-175P-201ENST00000516896 107 ntBASIC1.17□□□□□ -2.22
ATP6V1AP38606 RNU6-246P-201ENST00000384702 107 ntBASIC1.16□□□□□ -2.22
ATP6V1AP38606 MIR548AG1-201ENST00000579932 66 ntBASIC1.16□□□□□ -2.22
ATP6V1AP38606 MIR4714-201ENST00000580728 77 ntBASIC1.16□□□□□ -2.22
ATP6V1AP38606 MIR4677-201ENST00000584153 80 ntBASIC1.16□□□□□ -2.22
ATP6V1AP38606 SNORA40.16-201ENST00000517238 121 ntBASIC1.15□□□□□ -2.23
ATP6V1AP38606 AC084368.1-201ENST00000620935 65 ntBASIC1.15□□□□□ -2.23
ATP6V1AP38606 MIR518A1-201ENST00000385068 85 ntBASIC1.14□□□□□ -2.23
ATP6V1AP38606 RNU4-54P-201ENST00000516428 129 ntBASIC1.14□□□□□ -2.23
ATP6V1AP38606 RNU6-980P-201ENST00000516925 103 ntBASIC1.14□□□□□ -2.23
ATP6V1AP38606 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC1.14□□□□□ -2.23
ATP6V1AP38606 RNU6-1036P-201ENST00000383959 104 ntBASIC1.13□□□□□ -2.23
ATP6V1AP38606 MIRLET7B-201ENST00000385140 83 ntBASIC1.12□□□□□ -2.23
ATP6V1AP38606 MIR501-201ENST00000390204 84 ntBASIC1.12□□□□□ -2.23
ATP6V1AP38606 Y_RNA.109-201ENST00000363215 102 ntBASIC1.11□□□□□ -2.23
ATP6V1AP38606 RNU6-848P-201ENST00000515948 107 ntBASIC1.11□□□□□ -2.23
ATP6V1AP38606 RNU6-617P-201ENST00000516147 107 ntBASIC1.11□□□□□ -2.23
ATP6V1AP38606 RNU6-473P-201ENST00000516164 107 ntBASIC1.11□□□□□ -2.23
ATP6V1AP38606 RNU6-1049P-201ENST00000516414 107 ntBASIC1.11□□□□□ -2.23
ATP6V1AP38606 RNU6-782P-201ENST00000516852 104 ntBASIC1.11□□□□□ -2.23
ATP6V1AP38606 MIR6755-201ENST00000619993 66 ntBASIC1.11□□□□□ -2.23
ATP6V1AP38606 MIR429-201ENST00000362106 83 ntBASIC1.1□□□□□ -2.23
ATP6V1AP38606 RNU6-502P-201ENST00000362419 108 ntBASIC1.1□□□□□ -2.23
ATP6V1AP38606 SNORD1B-201ENST00000363091 84 ntBASIC1.09□□□□□ -2.23
ATP6V1AP38606 RNU6-810P-201ENST00000364001 107 ntBASIC1.09□□□□□ -2.23
ATP6V1AP38606 SNORA40B-201ENST00000385573 128 ntBASIC1.09□□□□□ -2.23
ATP6V1AP38606 MIR760-201ENST00000390220 80 ntBASIC1.09□□□□□ -2.23
ATP6V1AP38606 RNU6-172P-201ENST00000411000 93 ntBASIC1.09□□□□□ -2.23
ATP6V1AP38606 RPL39P28-201ENST00000465655 155 ntBASIC1.09□□□□□ -2.23
ATP6V1AP38606 RNU4-33P-201ENST00000364316 85 ntBASIC1.08□□□□□ -2.24
ATP6V1AP38606 RNU6-110P-201ENST00000384508 104 ntBASIC1.08□□□□□ -2.24
ATP6V1AP38606 AL590095.2-201ENST00000604136 117 ntBASIC1.07□□□□□ -2.24
ATP6V1AP38606 RNU6-458P-201ENST00000384179 107 ntBASIC1.06□□□□□ -2.24
ATP6V1AP38606 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC1.06□□□□□ -2.24
ATP6V1AP38606 AC098934.3-201ENST00000430450 190 ntBASIC1.06□□□□□ -2.24
ATP6V1AP38606 U6.58-201ENST00000613107 107 ntBASIC1.06□□□□□ -2.24
ATP6V1AP38606 RN7SL660P-201ENST00000614852 299 ntBASIC1.06□□□□□ -2.24
ATP6V1AP38606 MIR548X-201ENST00000580069 75 ntBASIC1.05□□□□□ -2.24
ATP6V1AP38606 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC1.05□□□□□ -2.24
ATP6V1AP38606 MIR6513-201ENST00000621188 64 ntBASIC1.05□□□□□ -2.24
ATP6V1AP38606 RNA5SP128-201ENST00000365305 116 ntBASIC1.03□□□□□ -2.24
ATP6V1AP38606 Y_RNA.374-201ENST00000365606 101 ntBASIC1.03□□□□□ -2.24
ATP6V1AP38606 MIR6835-201ENST00000621552 64 ntBASIC1.03□□□□□ -2.24
ATP6V1AP38606 MIR3925-201ENST00000584674 77 ntBASIC1.02□□□□□ -2.25
ATP6V1AP38606 MIR499B-201ENST00000636498 73 ntBASIC1.02□□□□□ -2.25
ATP6V1AP38606 RNU6-35P-201ENST00000384530 107 ntBASIC1.01□□□□□ -2.25
ATP6V1AP38606 MIR936-201ENST00000401264 98 ntBASIC1.01□□□□□ -2.25
ATP6V1AP38606 RNU6ATAC27P-201ENST00000408289 119 ntBASIC1.01□□□□□ -2.25
ATP6V1AP38606 PSMC1P5-201ENST00000512850 177 ntBASIC1.01□□□□□ -2.25
ATP6V1AP38606 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC1.01□□□□□ -2.25
ATP6V1AP38606 MIR193B-201ENST00000384907 83 ntBASIC1□□□□□ -2.25
ATP6V1AP38606 RNU7-129P-201ENST00000516128 62 ntBASIC1□□□□□ -2.25
ATP6V1AP38606 AL353803.5-201ENST00000599815 141 ntBASIC1□□□□□ -2.25
ATP6V1AP38606 MIR508-201ENST00000384857 115 ntBASIC0.99□□□□□ -2.25
ATP6V1AP38606 MIR876-201ENST00000401147 81 ntBASIC0.98□□□□□ -2.25
ATP6V1AP38606 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC0.98□□□□□ -2.25
ATP6V1AP38606 AP000676.1-201ENST00000533307 52 ntBASIC0.98□□□□□ -2.25
ATP6V1AP38606 MIR4490-201ENST00000582647 84 ntBASIC0.98□□□□□ -2.25
ATP6V1AP38606 SNORD114-2-201ENST00000363953 78 ntBASIC0.97□□□□□ -2.25
ATP6V1AP38606 MIR146A-201ENST00000385201 99 ntBASIC0.97□□□□□ -2.25
ATP6V1AP38606 RNU6-351P-201ENST00000516097 100 ntBASIC0.97□□□□□ -2.25
ATP6V1AP38606 MIR1273G-201ENST00000577677 100 ntBASIC0.97□□□□□ -2.25
ATP6V1AP38606 Y_RNA.30-201ENST00000362572 97 ntBASIC0.96□□□□□ -2.26
ATP6V1AP38606 SCARNA11.2-201ENST00000517183 154 ntBASIC0.96□□□□□ -2.26
ATP6V1AP38606 DLEU2_4.2-201ENST00000616613 58 ntBASIC0.96□□□□□ -2.26
ATP6V1AP38606 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.96□□□□□ -2.26
ATP6V1AP38606 RNU6-598P-201ENST00000364017 105 ntBASIC0.95□□□□□ -2.26
ATP6V1AP38606 RNU6-930P-201ENST00000390938 100 ntBASIC0.95□□□□□ -2.26
ATP6V1AP38606 RNU6-863P-201ENST00000515989 104 ntBASIC0.95□□□□□ -2.26
ATP6V1AP38606 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.95□□□□□ -2.26
ATP6V1AP38606 MIR6866-201ENST00000638146 69 ntBASIC0.95□□□□□ -2.26
ATP6V1AP38606 MIR106A-201ENST00000384870 81 ntBASIC0.94□□□□□ -2.26
ATP6V1AP38606 MIR4653-201ENST00000585107 83 ntBASIC0.94□□□□□ -2.26
ATP6V1AP38606 SNORD114-23-201ENST00000363536 72 ntBASIC0.93□□□□□ -2.26
ATP6V1AP38606 SNORD115-23-201ENST00000364461 82 ntBASIC0.93□□□□□ -2.26
ATP6V1AP38606 MIR579-201ENST00000385221 98 ntBASIC0.93□□□□□ -2.26
ATP6V1AP38606 snoR1.1-201ENST00000628177 80 ntBASIC0.93□□□□□ -2.26
ATP6V1AP38606 SNORD44.1-201ENST00000363202 61 ntBASIC0.92□□□□□ -2.26
ATP6V1AP38606 RNA5SP193-201ENST00000410353 107 ntBASIC0.92□□□□□ -2.26
ATP6V1AP38606 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.91□□□□□ -2.26
ATP6V1AP38606 AC108676.2-201ENST00000605225 163 ntBASIC0.91□□□□□ -2.26
ATP6V1AP38606 U2.18-201ENST00000622185 84 ntBASIC0.91□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 174.8 ms