Protein–RNA interactions for Protein: P35052

GPC1, Glypican-1, humanhuman

Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1P35052 PSMC1P5-201ENST00000512850 177 ntBASIC0.94□□□□□ -2.26
GPC1P35052 SNORA40.16-201ENST00000517238 121 ntBASIC0.94□□□□□ -2.26
GPC1P35052 AL590095.2-201ENST00000604136 117 ntBASIC0.94□□□□□ -2.26
GPC1P35052 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC0.94□□□□□ -2.26
GPC1P35052 MIR499B-201ENST00000636498 73 ntBASIC0.94□□□□□ -2.26
GPC1P35052 RNU6-502P-201ENST00000362419 108 ntBASIC0.93□□□□□ -2.26
GPC1P35052 RNU4-38P-201ENST00000364472 129 ntBASIC0.93□□□□□ -2.26
GPC1P35052 RNU6-110P-201ENST00000384508 104 ntBASIC0.93□□□□□ -2.26
GPC1P35052 MIR489-201ENST00000384923 84 ntBASIC0.93□□□□□ -2.26
GPC1P35052 RNU6-172P-201ENST00000411000 93 ntBASIC0.93□□□□□ -2.26
GPC1P35052 RPL39P28-201ENST00000465655 155 ntBASIC0.93□□□□□ -2.26
GPC1P35052 AC211469.2-201ENST00000605461 205 ntBASIC0.93□□□□□ -2.26
GPC1P35052 RN7SL660P-201ENST00000614852 299 ntBASIC0.93□□□□□ -2.26
GPC1P35052 MIR429-201ENST00000362106 83 ntBASIC0.92□□□□□ -2.26
GPC1P35052 RNU6-810P-201ENST00000364001 107 ntBASIC0.92□□□□□ -2.26
GPC1P35052 MIR520E-201ENST00000384867 87 ntBASIC0.92□□□□□ -2.26
GPC1P35052 SNORD1B-201ENST00000363091 84 ntBASIC0.91□□□□□ -2.26
GPC1P35052 RNA5SP128-201ENST00000365305 116 ntBASIC0.9□□□□□ -2.27
GPC1P35052 RNU6-458P-201ENST00000384179 107 ntBASIC0.9□□□□□ -2.27
GPC1P35052 AC098934.3-201ENST00000430450 190 ntBASIC0.9□□□□□ -2.27
GPC1P35052 AP000676.1-201ENST00000533307 52 ntBASIC0.9□□□□□ -2.27
GPC1P35052 U6.58-201ENST00000613107 107 ntBASIC0.9□□□□□ -2.27
GPC1P35052 RPS29P1-201ENST00000465274 159 ntBASIC0.89□□□□□ -2.27
GPC1P35052 MIR3925-201ENST00000584674 77 ntBASIC0.89□□□□□ -2.27
GPC1P35052 snoU13.18-201ENST00000459483 104 ntBASIC0.88□□□□□ -2.27
GPC1P35052 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC0.88□□□□□ -2.27
GPC1P35052 RNU6-848P-201ENST00000515948 107 ntBASIC0.88□□□□□ -2.27
GPC1P35052 RNU6-617P-201ENST00000516147 107 ntBASIC0.88□□□□□ -2.27
GPC1P35052 RNU6-473P-201ENST00000516164 107 ntBASIC0.88□□□□□ -2.27
GPC1P35052 RNU6-1049P-201ENST00000516414 107 ntBASIC0.88□□□□□ -2.27
GPC1P35052 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC0.88□□□□□ -2.27
GPC1P35052 SNORA40B-201ENST00000385573 128 ntBASIC0.87□□□□□ -2.27
GPC1P35052 AL353803.5-201ENST00000599815 141 ntBASIC0.87□□□□□ -2.27
GPC1P35052 RNU6-980P-201ENST00000516925 103 ntBASIC0.86□□□□□ -2.27
GPC1P35052 RNU4-33P-201ENST00000364316 85 ntBASIC0.85□□□□□ -2.27
GPC1P35052 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC0.85□□□□□ -2.27
GPC1P35052 SCARNA11.2-201ENST00000517183 154 ntBASIC0.85□□□□□ -2.27
GPC1P35052 MIR6734-201ENST00000621166 68 ntBASIC0.85□□□□□ -2.27
GPC1P35052 RNU6-42P-201ENST00000384165 107 ntBASIC0.84□□□□□ -2.27
GPC1P35052 RNA5SP220-201ENST00000516298 104 ntBASIC0.84□□□□□ -2.27
GPC1P35052 MIR373-201ENST00000362273 69 ntBASIC0.83□□□□□ -2.28
GPC1P35052 MIR532-201ENST00000385025 91 ntBASIC0.83□□□□□ -2.28
GPC1P35052 snoR1.1-201ENST00000628177 80 ntBASIC0.83□□□□□ -2.28
GPC1P35052 SNORD114-2-201ENST00000363953 78 ntBASIC0.82□□□□□ -2.28
GPC1P35052 RNU6-945P-201ENST00000383947 107 ntBASIC0.82□□□□□ -2.28
GPC1P35052 MIR579-201ENST00000385221 98 ntBASIC0.82□□□□□ -2.28
GPC1P35052 MIR876-201ENST00000401147 81 ntBASIC0.82□□□□□ -2.28
GPC1P35052 MIR548J-201ENST00000408833 112 ntBASIC0.82□□□□□ -2.28
GPC1P35052 AC022709.1-201ENST00000615967 87 ntBASIC0.82□□□□□ -2.28
GPC1P35052 MIR146A-201ENST00000385201 99 ntBASIC0.81□□□□□ -2.28
GPC1P35052 MIR3973-201ENST00000579824 107 ntBASIC0.81□□□□□ -2.28
GPC1P35052 MIR4653-201ENST00000585107 83 ntBASIC0.81□□□□□ -2.28
GPC1P35052 MIR6788-201ENST00000618842 66 ntBASIC0.81□□□□□ -2.28
GPC1P35052 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.81□□□□□ -2.28
GPC1P35052 MIR4698-201ENST00000577795 80 ntBASIC0.8□□□□□ -2.28
GPC1P35052 MIR548X-201ENST00000580069 75 ntBASIC0.8□□□□□ -2.28
GPC1P35052 MIR4432-201ENST00000581823 84 ntBASIC0.8□□□□□ -2.28
GPC1P35052 MIR151B-201ENST00000584249 96 ntBASIC0.8□□□□□ -2.28
GPC1P35052 MIR6857-201ENST00000613267 93 ntBASIC0.8□□□□□ -2.28
GPC1P35052 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.8□□□□□ -2.28
GPC1P35052 SNORD44.1-201ENST00000363202 61 ntBASIC0.79□□□□□ -2.28
GPC1P35052 RNU6-35P-201ENST00000384530 107 ntBASIC0.79□□□□□ -2.28
GPC1P35052 MIR4490-201ENST00000582647 84 ntBASIC0.79□□□□□ -2.28
GPC1P35052 U2.18-201ENST00000622185 84 ntBASIC0.79□□□□□ -2.28
GPC1P35052 RNU6-598P-201ENST00000364017 105 ntBASIC0.78□□□□□ -2.28
GPC1P35052 RNU6-863P-201ENST00000515989 104 ntBASIC0.77□□□□□ -2.29
GPC1P35052 RNU6-351P-201ENST00000516097 100 ntBASIC0.77□□□□□ -2.29
GPC1P35052 RNU6-1223P-201ENST00000517124 104 ntBASIC0.77□□□□□ -2.29
GPC1P35052 AC108676.2-201ENST00000605225 163 ntBASIC0.77□□□□□ -2.29
GPC1P35052 uc_338.36-201ENST00000622331 158 ntBASIC0.77□□□□□ -2.29
GPC1P35052 SNORD115-23-201ENST00000364461 82 ntBASIC0.76□□□□□ -2.29
GPC1P35052 MIR6866-201ENST00000638146 69 ntBASIC0.76□□□□□ -2.29
GPC1P35052 RNA5SP98-201ENST00000363158 137 ntBASIC0.75□□□□□ -2.29
GPC1P35052 MIR106A-201ENST00000384870 81 ntBASIC0.75□□□□□ -2.29
GPC1P35052 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.75□□□□□ -2.29
GPC1P35052 RNA5SP436-201ENST00000516020 115 ntBASIC0.75□□□□□ -2.29
GPC1P35052 RNU7-151P-201ENST00000516930 53 ntBASIC0.75□□□□□ -2.29
GPC1P35052 MIR6515-201ENST00000619843 57 ntBASIC0.75□□□□□ -2.29
GPC1P35052 MIR103A1-201ENST00000362165 78 ntBASIC0.74□□□□□ -2.29
GPC1P35052 RNU6-930P-201ENST00000390938 100 ntBASIC0.73□□□□□ -2.29
GPC1P35052 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.73□□□□□ -2.29
GPC1P35052 AC108740.1-201ENST00000498629 225 ntBASIC0.73□□□□□ -2.29
GPC1P35052 SNORA68.3-201ENST00000515906 83 ntBASIC0.73□□□□□ -2.29
GPC1P35052 CYP3A137P-201ENST00000562436 69 ntBASIC0.73□□□□□ -2.29
GPC1P35052 Y_RNA.540-201ENST00000384638 111 ntBASIC0.72□□□□□ -2.29
GPC1P35052 RNU6-1133P-201ENST00000410963 100 ntBASIC0.72□□□□□ -2.29
GPC1P35052 MIR5000-201ENST00000577717 103 ntBASIC0.72□□□□□ -2.29
GPC1P35052 PVT1_3.1-201ENST00000620853 95 ntBASIC0.72□□□□□ -2.29
GPC1P35052 MIR643-201ENST00000385267 97 ntBASIC0.71□□□□□ -2.3
GPC1P35052 RNU6-127P-201ENST00000390897 107 ntBASIC0.71□□□□□ -2.3
GPC1P35052 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.71□□□□□ -2.3
GPC1P35052 RNU7-88P-201ENST00000458752 63 ntBASIC0.71□□□□□ -2.3
GPC1P35052 RNU6-995P-201ENST00000391244 107 ntBASIC0.7□□□□□ -2.3
GPC1P35052 RNU6-1262P-201ENST00000516217 96 ntBASIC0.7□□□□□ -2.3
GPC1P35052 DLEU2_4.2-201ENST00000616613 58 ntBASIC0.7□□□□□ -2.3
GPC1P35052 uc_338.17-201ENST00000619633 179 ntBASIC0.7□□□□□ -2.3
GPC1P35052 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.69□□□□□ -2.3
GPC1P35052 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.69□□□□□ -2.3
GPC1P35052 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.69□□□□□ -2.3
GPC1P35052 AL391099.1-201ENST00000624635 187 ntBASIC0.69□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 213.4 ms