Protein–RNA interactions for Protein: P24928

POLR2A, DNA-directed RNA polymerase II subunit RPB1, humanhuman

Known RBP Predictions only

Length 1,970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2AP24928 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC0.54□□□□□ -2.32
POLR2AP24928 SNORA33.1-201ENST00000364957 130 ntBASIC0.53□□□□□ -2.32
POLR2AP24928 RNU6-499P-201ENST00000365615 107 ntBASIC0.53□□□□□ -2.32
POLR2AP24928 RNU6-800P-201ENST00000384473 103 ntBASIC0.53□□□□□ -2.32
POLR2AP24928 RNU6-604P-201ENST00000390917 100 ntBASIC0.53□□□□□ -2.32
POLR2AP24928 MIR3938-201ENST00000582157 103 ntBASIC0.53□□□□□ -2.32
POLR2AP24928 RNU4-54P-201ENST00000516428 129 ntBASIC0.52□□□□□ -2.33
POLR2AP24928 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.52□□□□□ -2.33
POLR2AP24928 RNA5SP98-201ENST00000363158 137 ntBASIC0.52□□□□□ -2.33
POLR2AP24928 MIR652-201ENST00000385278 98 ntBASIC0.52□□□□□ -2.33
POLR2AP24928 AC069271.1-201ENST00000445577 156 ntBASIC0.52□□□□□ -2.33
POLR2AP24928 MIR3925-201ENST00000584674 77 ntBASIC0.52□□□□□ -2.33
POLR2AP24928 RNU6-782P-201ENST00000516852 104 ntBASIC0.51□□□□□ -2.33
POLR2AP24928 RNU6-175P-201ENST00000516896 107 ntBASIC0.51□□□□□ -2.33
POLR2AP24928 U6.111-201ENST00000636093 83 ntBASIC0.51□□□□□ -2.33
POLR2AP24928 RNU6-668P-201ENST00000364180 107 ntBASIC0.5□□□□□ -2.33
POLR2AP24928 RNU6-645P-201ENST00000364649 106 ntBASIC0.5□□□□□ -2.33
POLR2AP24928 SNORA49-201ENST00000386157 136 ntBASIC0.5□□□□□ -2.33
POLR2AP24928 AC244090.1-201ENST00000441884 93 ntBASIC0.5□□□□□ -2.33
POLR2AP24928 MIR548AE1-201ENST00000583292 70 ntBASIC0.5□□□□□ -2.33
POLR2AP24928 RNU6-669P-201ENST00000365575 107 ntBASIC0.5□□□□□ -2.33
POLR2AP24928 MIR519A2-201ENST00000384990 87 ntBASIC0.5□□□□□ -2.33
POLR2AP24928 RNU6-337P-201ENST00000391243 106 ntBASIC0.5□□□□□ -2.33
POLR2AP24928 AC021146.9-201ENST00000512503 156 ntBASIC0.5□□□□□ -2.33
POLR2AP24928 SCARNA11.2-201ENST00000517183 154 ntBASIC0.5□□□□□ -2.33
POLR2AP24928 SNORD60.1-201ENST00000362451 73 ntBASIC0.49□□□□□ -2.33
POLR2AP24928 SNORA63.6-201ENST00000364921 119 ntBASIC0.49□□□□□ -2.33
POLR2AP24928 MIR548V-201ENST00000584165 80 ntBASIC0.49□□□□□ -2.33
POLR2AP24928 MIR4315-1-201ENST00000636800 73 ntBASIC0.49□□□□□ -2.33
POLR2AP24928 MIR6759-201ENST00000638110 65 ntBASIC0.49□□□□□ -2.33
POLR2AP24928 MIR4315-2-201ENST00000640925 73 ntBASIC0.49□□□□□ -2.33
POLR2AP24928 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.48□□□□□ -2.33
POLR2AP24928 RNU7-188P-201ENST00000517063 64 ntBASIC0.48□□□□□ -2.33
POLR2AP24928 RNU6-987P-201ENST00000384759 104 ntBASIC0.48□□□□□ -2.33
POLR2AP24928 HAR1A.1-201ENST00000459583 118 ntBASIC0.48□□□□□ -2.33
POLR2AP24928 SNORD44.1-201ENST00000363202 61 ntBASIC0.47□□□□□ -2.33
POLR2AP24928 MTND4LP19-201ENST00000403051 166 ntBASIC0.47□□□□□ -2.33
POLR2AP24928 MIR1255B2-201ENST00000408618 67 ntBASIC0.46□□□□□ -2.34
POLR2AP24928 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.46□□□□□ -2.34
POLR2AP24928 AC084368.1-201ENST00000620935 65 ntBASIC0.46□□□□□ -2.34
POLR2AP24928 AC090617.8-201ENST00000623339 167 ntBASIC0.46□□□□□ -2.34
POLR2AP24928 MIR5087-201ENST00000635826 76 ntBASIC0.46□□□□□ -2.34
POLR2AP24928 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.46□□□□□ -2.34
POLR2AP24928 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.46□□□□□ -2.34
POLR2AP24928 RNU6-1216P-201ENST00000362590 107 ntBASIC0.46□□□□□ -2.34
POLR2AP24928 AC096531.1-201ENST00000419107 107 ntBASIC0.46□□□□□ -2.34
POLR2AP24928 MIR6718-201ENST00000616153 80 ntBASIC0.46□□□□□ -2.34
POLR2AP24928 SNORD113-2-201ENST00000391082 72 ntBASIC0.45□□□□□ -2.34
POLR2AP24928 RNU6-92P-201ENST00000605893 104 ntBASIC0.45□□□□□ -2.34
POLR2AP24928 MIR6773-201ENST00000612812 74 ntBASIC0.45□□□□□ -2.34
POLR2AP24928 RNU6-502P-201ENST00000362419 108 ntBASIC0.45□□□□□ -2.34
POLR2AP24928 Y_RNA.246-201ENST00000364495 108 ntBASIC0.45□□□□□ -2.34
POLR2AP24928 RNU6-945P-201ENST00000383947 107 ntBASIC0.45□□□□□ -2.34
POLR2AP24928 RNU6-1184P-201ENST00000384588 108 ntBASIC0.45□□□□□ -2.34
POLR2AP24928 RNA5SP299-201ENST00000391203 116 ntBASIC0.44□□□□□ -2.34
POLR2AP24928 SNORD57-201ENST00000448188 72 ntBASIC0.44□□□□□ -2.34
POLR2AP24928 U7.6-201ENST00000610841 64 ntBASIC0.44□□□□□ -2.34
POLR2AP24928 MIR643-201ENST00000385267 97 ntBASIC0.43□□□□□ -2.34
POLR2AP24928 MIR548H2-201ENST00000408874 88 ntBASIC0.43□□□□□ -2.34
POLR2AP24928 RNA5SP227-201ENST00000516184 113 ntBASIC0.43□□□□□ -2.34
POLR2AP24928 RNU6-1327P-201ENST00000365302 105 ntBASIC0.43□□□□□ -2.34
POLR2AP24928 MIR4514-201ENST00000581410 57 ntBASIC0.43□□□□□ -2.34
POLR2AP24928 RNU6-614P-201ENST00000384369 107 ntBASIC0.42□□□□□ -2.34
POLR2AP24928 MIR892B-201ENST00000401279 77 ntBASIC0.42□□□□□ -2.34
POLR2AP24928 SNORA68.3-201ENST00000515906 83 ntBASIC0.42□□□□□ -2.34
POLR2AP24928 U6.59-201ENST00000615686 107 ntBASIC0.42□□□□□ -2.34
POLR2AP24928 U2.7-201ENST00000619197 100 ntBASIC0.42□□□□□ -2.34
POLR2AP24928 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.41□□□□□ -2.34
POLR2AP24928 RNA5SP128-201ENST00000365305 116 ntBASIC0.41□□□□□ -2.34
POLR2AP24928 RNU6-1036P-201ENST00000383959 104 ntBASIC0.41□□□□□ -2.34
POLR2AP24928 CR383656.4-201ENST00000546909 122 ntBASIC0.41□□□□□ -2.34
POLR2AP24928 RNU6-520P-201ENST00000384717 104 ntBASIC0.4□□□□□ -2.35
POLR2AP24928 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC0.39□□□□□ -2.35
POLR2AP24928 RNU7-159P-201ENST00000459284 62 ntBASIC0.39□□□□□ -2.35
POLR2AP24928 AC069113.3-201ENST00000521019 150 ntBASIC0.39□□□□□ -2.35
POLR2AP24928 MIR582-201ENST00000365731 98 ntBASIC0.39□□□□□ -2.35
POLR2AP24928 RNU6-1232P-201ENST00000516299 86 ntBASIC0.39□□□□□ -2.35
POLR2AP24928 AC090625.1-201ENST00000357130 210 ntBASIC0.38□□□□□ -2.35
POLR2AP24928 RNU6ATAC29P-201ENST00000408088 125 ntBASIC0.38□□□□□ -2.35
POLR2AP24928 AL021921.1-201ENST00000442774 93 ntBASIC0.38□□□□□ -2.35
POLR2AP24928 AC104408.1-201ENST00000605241 170 ntBASIC0.38□□□□□ -2.35
POLR2AP24928 SCARNA21.1-201ENST00000515996 128 ntBASIC0.37□□□□□ -2.35
POLR2AP24928 RNU6-302P-201ENST00000365249 107 ntBASIC0.37□□□□□ -2.35
POLR2AP24928 MIR876-201ENST00000401147 81 ntBASIC0.37□□□□□ -2.35
POLR2AP24928 MIR4743-201ENST00000584576 69 ntBASIC0.37□□□□□ -2.35
POLR2AP24928 RNU4-37P-201ENST00000410214 84 ntBASIC0.36□□□□□ -2.35
POLR2AP24928 RNU7-129P-201ENST00000516128 62 ntBASIC0.36□□□□□ -2.35
POLR2AP24928 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.36□□□□□ -2.35
POLR2AP24928 Y_RNA.325-201ENST00000365171 122 ntBASIC0.36□□□□□ -2.35
POLR2AP24928 RNU6-35P-201ENST00000384530 107 ntBASIC0.36□□□□□ -2.35
POLR2AP24928 RN7SL660P-201ENST00000614852 299 ntBASIC0.36□□□□□ -2.35
POLR2AP24928 SNORD115-25-201ENST00000362619 82 ntBASIC0.35□□□□□ -2.35
POLR2AP24928 MIR329-2-201ENST00000385029 84 ntBASIC0.35□□□□□ -2.35
POLR2AP24928 RNU6-46P-201ENST00000383860 107 ntBASIC0.34□□□□□ -2.35
POLR2AP24928 SNORA50A-201ENST00000384225 134 ntBASIC0.34□□□□□ -2.35
POLR2AP24928 SNORD116-16-201ENST00000384533 92 ntBASIC0.34□□□□□ -2.35
POLR2AP24928 MIR4752-201ENST00000579672 72 ntBASIC0.34□□□□□ -2.35
POLR2AP24928 MIR4432-201ENST00000581823 84 ntBASIC0.34□□□□□ -2.35
POLR2AP24928 MIR499B-201ENST00000636498 73 ntBASIC0.34□□□□□ -2.35
POLR2AP24928 MIR610-201ENST00000385139 96 ntBASIC0.34□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 235.2 ms