Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 MIR521-2-201ENST00000384818 87 ntBASIC0.08□□□□□ -2.4
XPAP23025 RNU6-337P-201ENST00000391243 106 ntBASIC0.08□□□□□ -2.4
XPAP23025 RNU7-165P-201ENST00000458864 60 ntBASIC0.08□□□□□ -2.4
XPAP23025 SNORD2-201ENST00000459163 69 ntBASIC0.08□□□□□ -2.4
XPAP23025 RNU6-638P-201ENST00000516582 104 ntBASIC0.08□□□□□ -2.4
XPAP23025 RNU6-656P-201ENST00000516785 107 ntBASIC0.08□□□□□ -2.4
XPAP23025 MIR4743-201ENST00000584576 69 ntBASIC0.08□□□□□ -2.4
XPAP23025 MIR371B-201ENST00000638082 66 ntBASIC0.08□□□□□ -2.4
XPAP23025 SNORD115-25-201ENST00000362619 82 ntBASIC0.07□□□□□ -2.4
XPAP23025 RNU6-645P-201ENST00000364649 106 ntBASIC0.07□□□□□ -2.4
XPAP23025 SNORD115-31-201ENST00000365318 82 ntBASIC0.07□□□□□ -2.4
XPAP23025 MIR154-201ENST00000385243 84 ntBASIC0.07□□□□□ -2.4
XPAP23025 RNU7-159P-201ENST00000459284 62 ntBASIC0.07□□□□□ -2.4
XPAP23025 U6.96-201ENST00000636425 70 ntBASIC0.07□□□□□ -2.4
XPAP23025 SNORD114-16-201ENST00000363044 70 ntBASIC0.06□□□□□ -2.4
XPAP23025 RNU6-776P-201ENST00000364403 104 ntBASIC0.06□□□□□ -2.4
XPAP23025 RNU6-1022P-201ENST00000365049 104 ntBASIC0.06□□□□□ -2.4
XPAP23025 RNU6-302P-201ENST00000365249 107 ntBASIC0.06□□□□□ -2.4
XPAP23025 RNU6-929P-201ENST00000384429 107 ntBASIC0.06□□□□□ -2.4
XPAP23025 RNU6-1162P-201ENST00000384443 104 ntBASIC0.06□□□□□ -2.4
XPAP23025 MIR6773-201ENST00000612812 74 ntBASIC0.06□□□□□ -2.4
XPAP23025 MIR6507-201ENST00000613630 70 ntBASIC0.06□□□□□ -2.4
XPAP23025 MIR6718-201ENST00000616153 80 ntBASIC0.06□□□□□ -2.4
XPAP23025 RNU6-502P-201ENST00000362419 108 ntBASIC0.05□□□□□ -2.4
XPAP23025 SNORD113.1-201ENST00000363280 73 ntBASIC0.05□□□□□ -2.4
XPAP23025 MIR8053-201ENST00000613344 75 ntBASIC0.05□□□□□ -2.4
XPAP23025 MIR4662A-201ENST00000637499 67 ntBASIC0.05□□□□□ -2.4
XPAP23025 RNA5SP63-201ENST00000391225 112 ntBASIC0.04□□□□□ -2.4
XPAP23025 RNU6-881P-201ENST00000516813 102 ntBASIC0.04□□□□□ -2.4
XPAP23025 MIR148A-201ENST00000362215 68 ntBASIC0.03□□□□□ -2.4
XPAP23025 Y_RNA.115-201ENST00000363272 98 ntBASIC0.03□□□□□ -2.4
XPAP23025 Y_RNA.545-201ENST00000384652 105 ntBASIC0.03□□□□□ -2.4
XPAP23025 MIR4290-201ENST00000583807 95 ntBASIC0.02□□□□□ -2.41
XPAP23025 Y_RNA.565-201ENST00000384719 101 ntBASIC0.01□□□□□ -2.41
XPAP23025 MIR4768-201ENST00000585270 74 ntBASIC0.01□□□□□ -2.41
XPAP23025 CYP3A54P-201ENST00000566950 75 ntBASIC0□□□□□ -2.41
XPAP23025 MIRLET7B-201ENST00000385140 83 ntBASIC-0.01□□□□□ -2.41
XPAP23025 AC244250.2-201ENST00000418731 148 ntBASIC-0.01□□□□□ -2.41
XPAP23025 RNU6-634P-201ENST00000459134 106 ntBASIC-0.02□□□□□ -2.41
XPAP23025 AL109933.3-201ENST00000619095 188 ntBASIC-0.02□□□□□ -2.41
XPAP23025 RNA5SP457-201ENST00000363657 124 ntBASIC-0.03□□□□□ -2.41
XPAP23025 RNU6-455P-201ENST00000384681 107 ntBASIC-0.03□□□□□ -2.41
XPAP23025 MIR9-2-201ENST00000384838 87 ntBASIC-0.03□□□□□ -2.41
XPAP23025 SNORD116-24-201ENST00000384549 92 ntBASIC-0.04□□□□□ -2.42
XPAP23025 MIR1255B2-201ENST00000408618 67 ntBASIC-0.04□□□□□ -2.42
XPAP23025 MIR4667-201ENST00000578933 66 ntBASIC-0.04□□□□□ -2.42
XPAP23025 Clostridiales-1.4-201ENST00000636807 150 ntBASIC-0.04□□□□□ -2.42
XPAP23025 MIR655-201ENST00000362159 97 ntBASIC-0.05□□□□□ -2.42
XPAP23025 RNU6-895P-201ENST00000384125 103 ntBASIC-0.05□□□□□ -2.42
XPAP23025 RNU6-540P-201ENST00000384622 101 ntBASIC-0.05□□□□□ -2.42
XPAP23025 MIR5190-201ENST00000581537 80 ntBASIC-0.05□□□□□ -2.42
XPAP23025 U2.7-201ENST00000619197 100 ntBASIC-0.05□□□□□ -2.42
XPAP23025 uc_338.36-201ENST00000622331 158 ntBASIC-0.05□□□□□ -2.42
XPAP23025 MTND4LP1-201ENST00000446263 157 ntBASIC-0.06□□□□□ -2.42
XPAP23025 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-0.06□□□□□ -2.42
XPAP23025 RNU6-1216P-201ENST00000362590 107 ntBASIC-0.07□□□□□ -2.42
XPAP23025 MIR548C-201ENST00000384815 97 ntBASIC-0.07□□□□□ -2.42
XPAP23025 RNU6-668P-201ENST00000364180 107 ntBASIC-0.08□□□□□ -2.42
XPAP23025 RNU7-55P-201ENST00000459426 62 ntBASIC-0.08□□□□□ -2.42
XPAP23025 RNU6-1089P-201ENST00000516473 104 ntBASIC-0.08□□□□□ -2.42
XPAP23025 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC-0.08□□□□□ -2.42
XPAP23025 RNU6-46P-201ENST00000383860 107 ntBASIC-0.09□□□□□ -2.42
XPAP23025 RNU6-900P-201ENST00000384498 102 ntBASIC-0.09□□□□□ -2.42
XPAP23025 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.09□□□□□ -2.42
XPAP23025 MIR2909-201ENST00000617113 69 ntBASIC-0.09□□□□□ -2.42
XPAP23025 SNORD49B-201ENST00000365172 72 ntBASIC-0.1□□□□□ -2.43
XPAP23025 RNU6-1296P-201ENST00000383879 107 ntBASIC-0.1□□□□□ -2.43
XPAP23025 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.1□□□□□ -2.43
XPAP23025 SNORD115-23-201ENST00000364461 82 ntBASIC-0.11□□□□□ -2.43
XPAP23025 SNORA32.1-201ENST00000364514 115 ntBASIC-0.11□□□□□ -2.43
XPAP23025 MIR519A2-201ENST00000384990 87 ntBASIC-0.12□□□□□ -2.43
XPAP23025 RNU6-663P-201ENST00000391105 106 ntBASIC-0.12□□□□□ -2.43
XPAP23025 RNU6-518P-201ENST00000516056 96 ntBASIC-0.12□□□□□ -2.43
XPAP23025 AL391099.1-201ENST00000624635 187 ntBASIC-0.12□□□□□ -2.43
XPAP23025 RNU6-871P-201ENST00000516122 100 ntBASIC-0.13□□□□□ -2.43
XPAP23025 SNORD56B-201ENST00000384713 71 ntBASIC-0.14□□□□□ -2.43
XPAP23025 RNU6-973P-201ENST00000364690 107 ntBASIC-0.15□□□□□ -2.43
XPAP23025 SNORD114-12-201ENST00000365400 75 ntBASIC-0.15□□□□□ -2.43
XPAP23025 SNORD30.1-201ENST00000391309 70 ntBASIC-0.15□□□□□ -2.43
XPAP23025 AC104692.1-201ENST00000472406 90 ntBASIC-0.15□□□□□ -2.43
XPAP23025 RNU7-174P-201ENST00000516248 59 ntBASIC-0.15□□□□□ -2.43
XPAP23025 MIR4432-201ENST00000581823 84 ntBASIC-0.15□□□□□ -2.43
XPAP23025 MIR548V-201ENST00000584165 80 ntBASIC-0.15□□□□□ -2.43
XPAP23025 snoR1.1-201ENST00000628177 80 ntBASIC-0.15□□□□□ -2.43
XPAP23025 Y_RNA.185-201ENST00000363894 100 ntBASIC-0.16□□□□□ -2.44
XPAP23025 RNU6-1133P-201ENST00000410963 100 ntBASIC-0.16□□□□□ -2.44
XPAP23025 MIR5704-201ENST00000584029 77 ntBASIC-0.16□□□□□ -2.44
XPAP23025 AL353803.5-201ENST00000599815 141 ntBASIC-0.16□□□□□ -2.44
XPAP23025 RNA5SP257-201ENST00000363023 116 ntBASIC-0.17□□□□□ -2.44
XPAP23025 AL021921.1-201ENST00000442774 93 ntBASIC-0.17□□□□□ -2.44
XPAP23025 MIR1295B-201ENST00000636144 60 ntBASIC-0.17□□□□□ -2.44
XPAP23025 RNU6-901P-201ENST00000384593 106 ntBASIC-0.18□□□□□ -2.44
XPAP23025 AC096531.1-201ENST00000419107 107 ntBASIC-0.18□□□□□ -2.44
XPAP23025 RNA5SP470-201ENST00000516463 106 ntBASIC-0.18□□□□□ -2.44
XPAP23025 RNU6-649P-201ENST00000384463 107 ntBASIC-0.19□□□□□ -2.44
XPAP23025 MIR517B-201ENST00000385102 67 ntBASIC-0.19□□□□□ -2.44
XPAP23025 RNU6-630P-201ENST00000391258 106 ntBASIC-0.19□□□□□ -2.44
XPAP23025 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-0.19□□□□□ -2.44
XPAP23025 RNU6ATAC11P-201ENST00000408541 125 ntBASIC-0.19□□□□□ -2.44
XPAP23025 AL445193.1-201ENST00000441183 141 ntBASIC-0.19□□□□□ -2.44
Retrieved 100 of 98,524 protein–RNA pairs in 172.9 ms