Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 SNORD45.1-201ENST00000363181 77 ntBASIC-0.08□□□□□ -2.42
ERCC3P19447 SNORA49-201ENST00000386157 136 ntBASIC-0.08□□□□□ -2.42
ERCC3P19447 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.08□□□□□ -2.42
ERCC3P19447 SNORD78.1-201ENST00000390866 65 ntBASIC-0.08□□□□□ -2.42
ERCC3P19447 MIR1265-201ENST00000408444 86 ntBASIC-0.08□□□□□ -2.42
ERCC3P19447 MIR5589-201ENST00000579442 60 ntBASIC-0.08□□□□□ -2.42
ERCC3P19447 Y_RNA.250-201ENST00000364542 110 ntBASIC-0.09□□□□□ -2.42
ERCC3P19447 RNU6-1162P-201ENST00000384443 104 ntBASIC-0.09□□□□□ -2.42
ERCC3P19447 MIR4636-201ENST00000582271 80 ntBASIC-0.09□□□□□ -2.42
ERCC3P19447 Y_RNA.185-201ENST00000363894 100 ntBASIC-0.1□□□□□ -2.43
ERCC3P19447 SNORA15B-2-201ENST00000384058 135 ntBASIC-0.1□□□□□ -2.43
ERCC3P19447 SNORA15B-1-201ENST00000384334 135 ntBASIC-0.1□□□□□ -2.43
ERCC3P19447 SNORA40.17-201ENST00000517256 115 ntBASIC-0.1□□□□□ -2.43
ERCC3P19447 IGLVI-20-201ENST00000519296 130 ntBASIC-0.1□□□□□ -2.43
ERCC3P19447 SCARNA18B-201ENST00000458806 135 ntBASIC-0.11□□□□□ -2.43
ERCC3P19447 RNU6-455P-201ENST00000384681 107 ntBASIC-0.12□□□□□ -2.43
ERCC3P19447 RNU6-604P-201ENST00000390917 100 ntBASIC-0.13□□□□□ -2.43
ERCC3P19447 AC104692.1-201ENST00000472406 90 ntBASIC-0.13□□□□□ -2.43
ERCC3P19447 MIR6507-201ENST00000613630 70 ntBASIC-0.13□□□□□ -2.43
ERCC3P19447 SNORA32.1-201ENST00000364514 115 ntBASIC-0.14□□□□□ -2.43
ERCC3P19447 SNORA33.1-201ENST00000364957 130 ntBASIC-0.14□□□□□ -2.43
ERCC3P19447 RNU6-302P-201ENST00000365249 107 ntBASIC-0.14□□□□□ -2.43
ERCC3P19447 SNORD114-12-201ENST00000365400 75 ntBASIC-0.14□□□□□ -2.43
ERCC3P19447 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-0.14□□□□□ -2.43
ERCC3P19447 RNU6-70P-201ENST00000516438 60 ntBASIC-0.14□□□□□ -2.43
ERCC3P19447 MIR664A-201ENST00000626086 82 ntBASIC-0.14□□□□□ -2.43
ERCC3P19447 RNU6-46P-201ENST00000383860 107 ntBASIC-0.15□□□□□ -2.43
ERCC3P19447 RNA5SP225-201ENST00000410874 135 ntBASIC-0.16□□□□□ -2.44
ERCC3P19447 MIR4802-201ENST00000581881 80 ntBASIC-0.16□□□□□ -2.44
ERCC3P19447 MIR6773-201ENST00000612812 74 ntBASIC-0.16□□□□□ -2.44
ERCC3P19447 Clostridiales-1.4-201ENST00000636807 150 ntBASIC-0.16□□□□□ -2.44
ERCC3P19447 SNORD114-31-201ENST00000363219 75 ntBASIC-0.17□□□□□ -2.44
ERCC3P19447 SNORD49B-201ENST00000365172 72 ntBASIC-0.17□□□□□ -2.44
ERCC3P19447 Z95118.1-201ENST00000421372 247 ntBASIC-0.17□□□□□ -2.44
ERCC3P19447 Y_RNA.633-201ENST00000459107 95 ntBASIC-0.17□□□□□ -2.44
ERCC3P19447 uc_338.36-201ENST00000622331 158 ntBASIC-0.17□□□□□ -2.44
ERCC3P19447 snoR1.1-201ENST00000628177 80 ntBASIC-0.18□□□□□ -2.44
ERCC3P19447 MIR1295B-201ENST00000636144 60 ntBASIC-0.18□□□□□ -2.44
ERCC3P19447 RNU6-901P-201ENST00000384593 106 ntBASIC-0.19□□□□□ -2.44
ERCC3P19447 MIR521-2-201ENST00000384818 87 ntBASIC-0.19□□□□□ -2.44
ERCC3P19447 AC244250.2-201ENST00000418731 148 ntBASIC-0.19□□□□□ -2.44
ERCC3P19447 RNU6-857P-201ENST00000515893 110 ntBASIC-0.19□□□□□ -2.44
ERCC3P19447 U7.4-201ENST00000614961 63 ntBASIC-0.19□□□□□ -2.44
ERCC3P19447 MIR6739-201ENST00000622461 75 ntBASIC-0.2□□□□□ -2.44
ERCC3P19447 RNU6-502P-201ENST00000362419 108 ntBASIC-0.21□□□□□ -2.44
ERCC3P19447 MIR548C-201ENST00000384815 97 ntBASIC-0.21□□□□□ -2.44
ERCC3P19447 AC145423.2-201ENST00000610631 239 ntBASIC-0.21□□□□□ -2.44
ERCC3P19447 MIR154-201ENST00000385243 84 ntBASIC-0.22□□□□□ -2.44
ERCC3P19447 RNU6-1133P-201ENST00000410963 100 ntBASIC-0.22□□□□□ -2.44
ERCC3P19447 RNU6-24P-201ENST00000384440 107 ntBASIC-0.23□□□□□ -2.45
ERCC3P19447 MIR214-201ENST00000385214 110 ntBASIC-0.23□□□□□ -2.45
ERCC3P19447 MIR8053-201ENST00000613344 75 ntBASIC-0.23□□□□□ -2.45
ERCC3P19447 Y_RNA.788-201ENST00000622394 112 ntBASIC-0.23□□□□□ -2.45
ERCC3P19447 SNORA18.1-201ENST00000363418 128 ntBASIC-0.24□□□□□ -2.45
ERCC3P19447 RNU6-645P-201ENST00000364649 106 ntBASIC-0.24□□□□□ -2.45
ERCC3P19447 MIR655-201ENST00000362159 97 ntBASIC-0.25□□□□□ -2.45
ERCC3P19447 RNU6-279P-201ENST00000391297 101 ntBASIC-0.25□□□□□ -2.45
ERCC3P19447 RNU6-758P-201ENST00000516292 89 ntBASIC-0.25□□□□□ -2.45
ERCC3P19447 MIR3134-201ENST00000579433 74 ntBASIC-0.25□□□□□ -2.45
ERCC3P19447 RNU6-900P-201ENST00000384498 102 ntBASIC-0.26□□□□□ -2.45
ERCC3P19447 RNA5SP25-201ENST00000410815 110 ntBASIC-0.26□□□□□ -2.45
ERCC3P19447 CYP3A54P-201ENST00000566950 75 ntBASIC-0.26□□□□□ -2.45
ERCC3P19447 MIR4645-201ENST00000583158 77 ntBASIC-0.26□□□□□ -2.45
ERCC3P19447 AP001180.6-201ENST00000584918 159 ntBASIC-0.26□□□□□ -2.45
ERCC3P19447 RNU6-337P-201ENST00000391243 106 ntBASIC-0.27□□□□□ -2.45
ERCC3P19447 SNORD4A-201ENST00000459174 72 ntBASIC-0.27□□□□□ -2.45
ERCC3P19447 RNU6-982P-201ENST00000516216 102 ntBASIC-0.27□□□□□ -2.45
ERCC3P19447 AC090617.8-201ENST00000623339 167 ntBASIC-0.27□□□□□ -2.45
ERCC3P19447 SNORD45A-201ENST00000384512 84 ntBASIC-0.28□□□□□ -2.45
ERCC3P19447 RNU6-1241P-201ENST00000384536 107 ntBASIC-0.28□□□□□ -2.45
ERCC3P19447 MIR9-2-201ENST00000384838 87 ntBASIC-0.28□□□□□ -2.45
ERCC3P19447 MIRLET7B-201ENST00000385140 83 ntBASIC-0.28□□□□□ -2.45
ERCC3P19447 AL445193.1-201ENST00000441183 141 ntBASIC-0.28□□□□□ -2.45
ERCC3P19447 MIR4263-201ENST00000584745 83 ntBASIC-0.28□□□□□ -2.45
ERCC3P19447 MIR1255B2-201ENST00000408618 67 ntBASIC-0.29□□□□□ -2.46
ERCC3P19447 snoU13.19-201ENST00000459148 104 ntBASIC-0.29□□□□□ -2.46
ERCC3P19447 RNU6-656P-201ENST00000516785 107 ntBASIC-0.29□□□□□ -2.46
ERCC3P19447 MIR4493-201ENST00000584016 73 ntBASIC-0.29□□□□□ -2.46
ERCC3P19447 RNU6-895P-201ENST00000384125 103 ntBASIC-0.3□□□□□ -2.46
ERCC3P19447 MIR889-201ENST00000401280 79 ntBASIC-0.3□□□□□ -2.46
ERCC3P19447 MTND4LP1-201ENST00000446263 157 ntBASIC-0.3□□□□□ -2.46
ERCC3P19447 AL391099.1-201ENST00000624635 187 ntBASIC-0.3□□□□□ -2.46
ERCC3P19447 SNORD115-22-201ENST00000364456 82 ntBASIC-0.31□□□□□ -2.46
ERCC3P19447 RNU6-411P-201ENST00000384451 107 ntBASIC-0.31□□□□□ -2.46
ERCC3P19447 MIR3666-201ENST00000607845 111 ntBASIC-0.31□□□□□ -2.46
ERCC3P19447 MIR604-201ENST00000384880 94 ntBASIC-0.32□□□□□ -2.46
ERCC3P19447 RNU6-587P-201ENST00000391282 106 ntBASIC-0.32□□□□□ -2.46
ERCC3P19447 FAS-AS1.1-201ENST00000615327 126 ntBASIC-0.33□□□□□ -2.46
ERCC3P19447 SNORD113.1-201ENST00000363280 73 ntBASIC-0.34□□□□□ -2.46
ERCC3P19447 Y_RNA.685-201ENST00000516532 108 ntBASIC-0.34□□□□□ -2.46
ERCC3P19447 RNU6-881P-201ENST00000516813 102 ntBASIC-0.34□□□□□ -2.46
ERCC3P19447 RNU7-55P-201ENST00000459426 62 ntBASIC-0.35□□□□□ -2.47
ERCC3P19447 MIR4432-201ENST00000581823 84 ntBASIC-0.35□□□□□ -2.47
ERCC3P19447 SNORD114-28-201ENST00000363610 72 ntBASIC-0.36□□□□□ -2.47
ERCC3P19447 SNORD114-15-201ENST00000364687 72 ntBASIC-0.36□□□□□ -2.47
ERCC3P19447 RNU6-320P-201ENST00000516511 106 ntBASIC-0.36□□□□□ -2.47
ERCC3P19447 AL590491.3-201ENST00000610731 82 ntBASIC-0.36□□□□□ -2.47
ERCC3P19447 RNU6-668P-201ENST00000364180 107 ntBASIC-0.37□□□□□ -2.47
ERCC3P19447 RNA5SP368-201ENST00000364298 116 ntBASIC-0.37□□□□□ -2.47
ERCC3P19447 RNU6-973P-201ENST00000364690 107 ntBASIC-0.37□□□□□ -2.47
Retrieved 100 of 98,524 protein–RNA pairs in 7.7 ms