Protein–RNA interactions for Protein: P16070

CD44, CD44 antigen, humanhuman

Known RBP Predictions only

Length 742 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD44P16070 MIR618-201ENST00000385287 98 ntBASIC1.68□□□□□ -2.14
CD44P16070 MIR1304-201ENST00000408243 91 ntBASIC1.68□□□□□ -2.14
CD44P16070 snoU13.15-201ENST00000459407 104 ntBASIC1.68□□□□□ -2.14
CD44P16070 SNORA25.15-201ENST00000516487 89 ntBASIC1.68□□□□□ -2.14
CD44P16070 uc_338.36-201ENST00000622331 158 ntBASIC1.68□□□□□ -2.14
CD44P16070 RNU6-1091P-201ENST00000363945 107 ntBASIC1.67□□□□□ -2.14
CD44P16070 SNORD19-201ENST00000391191 68 ntBASIC1.67□□□□□ -2.14
CD44P16070 RNY3P8-201ENST00000411366 126 ntBASIC1.67□□□□□ -2.14
CD44P16070 BX248123.2-201ENST00000606318 124 ntBASIC1.67□□□□□ -2.14
CD44P16070 SNORD118-201ENST00000363593 134 ntBASIC1.66□□□□□ -2.14
CD44P16070 RNU6-1133P-201ENST00000410963 100 ntBASIC1.66□□□□□ -2.14
CD44P16070 ACA64.5-201ENST00000516207 127 ntBASIC1.66□□□□□ -2.14
CD44P16070 RNA5SP61-201ENST00000516453 100 ntBASIC1.65□□□□□ -2.15
CD44P16070 MIR3925-201ENST00000584674 77 ntBASIC1.65□□□□□ -2.15
CD44P16070 SNORD13-201ENST00000459299 104 ntBASIC1.64□□□□□ -2.15
CD44P16070 snoU13.26-201ENST00000459452 105 ntBASIC1.64□□□□□ -2.15
CD44P16070 RNA5SP190-201ENST00000365222 118 ntBASIC1.63□□□□□ -2.15
CD44P16070 MIR4285-201ENST00000581001 85 ntBASIC1.63□□□□□ -2.15
CD44P16070 RNU6-973P-201ENST00000364690 107 ntBASIC1.62□□□□□ -2.15
CD44P16070 RNU7-55P-201ENST00000459426 62 ntBASIC1.62□□□□□ -2.15
CD44P16070 MIR548T-201ENST00000408369 74 ntBASIC1.61□□□□□ -2.15
CD44P16070 RNU6-848P-201ENST00000515948 107 ntBASIC1.61□□□□□ -2.15
CD44P16070 RNU6-617P-201ENST00000516147 107 ntBASIC1.61□□□□□ -2.15
CD44P16070 RNU6-473P-201ENST00000516164 107 ntBASIC1.61□□□□□ -2.15
CD44P16070 RNU6-1049P-201ENST00000516414 107 ntBASIC1.61□□□□□ -2.15
CD44P16070 MIR6755-201ENST00000619993 66 ntBASIC1.61□□□□□ -2.15
CD44P16070 RNA5SP98-201ENST00000363158 137 ntBASIC1.59□□□□□ -2.15
CD44P16070 SNORA36.2-201ENST00000384004 127 ntBASIC1.59□□□□□ -2.15
CD44P16070 RN7SL429P-201ENST00000479090 223 ntBASIC1.59□□□□□ -2.15
CD44P16070 RN7SL489P-201ENST00000486185 223 ntBASIC1.59□□□□□ -2.15
CD44P16070 RN7SL327P-201ENST00000488659 223 ntBASIC1.59□□□□□ -2.15
CD44P16070 RN7SL853P-201ENST00000617250 223 ntBASIC1.59□□□□□ -2.15
CD44P16070 RNU1-42P-201ENST00000364033 160 ntBASIC1.58□□□□□ -2.16
CD44P16070 MIR760-201ENST00000390220 80 ntBASIC1.58□□□□□ -2.16
CD44P16070 SNORA40.8-201ENST00000411034 126 ntBASIC1.58□□□□□ -2.16
CD44P16070 AC096531.1-201ENST00000419107 107 ntBASIC1.58□□□□□ -2.16
CD44P16070 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.57□□□□□ -2.16
CD44P16070 MIR140-201ENST00000385282 100 ntBASIC1.57□□□□□ -2.16
CD44P16070 MIR4303-201ENST00000581299 66 ntBASIC1.57□□□□□ -2.16
CD44P16070 RNU6-1233P-201ENST00000362922 102 ntBASIC1.56□□□□□ -2.16
CD44P16070 Y_RNA.134-201ENST00000363435 105 ntBASIC1.56□□□□□ -2.16
CD44P16070 MIR518A1-201ENST00000385068 85 ntBASIC1.56□□□□□ -2.16
CD44P16070 RNA5SP404-201ENST00000517118 132 ntBASIC1.56□□□□□ -2.16
CD44P16070 Y_RNA.519-201ENST00000384553 102 ntBASIC1.55□□□□□ -2.16
CD44P16070 SNORA67.6-201ENST00000391093 99 ntBASIC1.55□□□□□ -2.16
CD44P16070 MIR1261-201ENST00000408659 82 ntBASIC1.55□□□□□ -2.16
CD44P16070 SNORA31.24-201ENST00000517232 57 ntBASIC1.55□□□□□ -2.16
CD44P16070 AC068338.1-201ENST00000565567 176 ntBASIC1.55□□□□□ -2.16
CD44P16070 SNORD53B-201ENST00000577887 78 ntBASIC1.55□□□□□ -2.16
CD44P16070 MIR4298-201ENST00000584380 73 ntBASIC1.55□□□□□ -2.16
CD44P16070 AL353765.1-201ENST00000605514 183 ntBASIC1.55□□□□□ -2.16
CD44P16070 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.54□□□□□ -2.16
CD44P16070 SNORA42.1-201ENST00000363515 137 ntBASIC1.54□□□□□ -2.16
CD44P16070 Y_RNA.382-201ENST00000365672 114 ntBASIC1.54□□□□□ -2.16
CD44P16070 RNU4-54P-201ENST00000516428 129 ntBASIC1.54□□□□□ -2.16
CD44P16070 MIR7974-201ENST00000615835 79 ntBASIC1.54□□□□□ -2.16
CD44P16070 SNORD115.2-201ENST00000391126 59 ntBASIC1.53□□□□□ -2.16
CD44P16070 RNA5SP128-201ENST00000365305 116 ntBASIC1.52□□□□□ -2.17
CD44P16070 SCARNA11.2-201ENST00000517183 154 ntBASIC1.52□□□□□ -2.17
CD44P16070 SNORD60-201ENST00000383903 83 ntBASIC1.51□□□□□ -2.17
CD44P16070 SNORD26-201ENST00000384147 75 ntBASIC1.51□□□□□ -2.17
CD44P16070 RNU6-997P-201ENST00000384725 107 ntBASIC1.51□□□□□ -2.17
CD44P16070 SNORD71-201ENST00000411292 86 ntBASIC1.51□□□□□ -2.17
CD44P16070 RNA5SP67-201ENST00000516422 131 ntBASIC1.51□□□□□ -2.17
CD44P16070 MIR8068-201ENST00000618032 68 ntBASIC1.51□□□□□ -2.17
CD44P16070 RNU6-608P-201ENST00000383927 104 ntBASIC1.5□□□□□ -2.17
CD44P16070 MIR124-2-201ENST00000385081 109 ntBASIC1.5□□□□□ -2.17
CD44P16070 MIR764-201ENST00000390811 85 ntBASIC1.5□□□□□ -2.17
CD44P16070 RNA5SP247-201ENST00000411181 105 ntBASIC1.5□□□□□ -2.17
CD44P16070 MIR5704-201ENST00000584029 77 ntBASIC1.5□□□□□ -2.17
CD44P16070 MIR499B-201ENST00000636498 73 ntBASIC1.5□□□□□ -2.17
CD44P16070 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
CD44P16070 RNU1-17P-201ENST00000363022 152 ntBASIC1.49□□□□□ -2.17
CD44P16070 RNU6-900P-201ENST00000384498 102 ntBASIC1.49□□□□□ -2.17
CD44P16070 AP002795.1-201ENST00000534879 84 ntBASIC1.49□□□□□ -2.17
CD44P16070 RPS29P23-201ENST00000458635 123 ntBASIC1.48□□□□□ -2.17
CD44P16070 MIR643-201ENST00000385267 97 ntBASIC1.46□□□□□ -2.18
CD44P16070 SNORA67.5-201ENST00000391036 107 ntBASIC1.46□□□□□ -2.18
CD44P16070 MIR548N-201ENST00000408742 75 ntBASIC1.46□□□□□ -2.18
CD44P16070 AC104984.5-201ENST00000586878 94 ntBASIC1.46□□□□□ -2.18
CD44P16070 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.44□□□□□ -2.18
CD44P16070 MIR6854-201ENST00000614935 69 ntBASIC1.44□□□□□ -2.18
CD44P16070 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
CD44P16070 RNU7-129P-201ENST00000516128 62 ntBASIC1.43□□□□□ -2.18
CD44P16070 AC087343.1-201ENST00000477341 475 ntBASIC1.42□□□□□ -2.18
CD44P16070 AC108740.1-201ENST00000498629 225 ntBASIC1.42□□□□□ -2.18
CD44P16070 MIR3660-201ENST00000584845 100 ntBASIC1.41□□□□□ -2.18
CD44P16070 MIR6715A-201ENST00000615929 79 ntBASIC1.41□□□□□ -2.18
CD44P16070 MIR5683-201ENST00000636514 76 ntBASIC1.41□□□□□ -2.18
CD44P16070 MIR3124-201ENST00000582636 67 ntBASIC1.4□□□□□ -2.19
CD44P16070 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.4□□□□□ -2.19
CD44P16070 MIR7843-201ENST00000622274 79 ntBASIC1.4□□□□□ -2.19
CD44P16070 RNA5SP325-201ENST00000363756 130 ntBASIC1.39□□□□□ -2.19
CD44P16070 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
CD44P16070 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC1.38□□□□□ -2.19
CD44P16070 Y_RNA.320-201ENST00000365144 102 ntBASIC1.37□□□□□ -2.19
CD44P16070 RNU6-455P-201ENST00000384681 107 ntBASIC1.37□□□□□ -2.19
CD44P16070 MIR4421-201ENST00000578133 69 ntBASIC1.37□□□□□ -2.19
CD44P16070 MIR26B-201ENST00000362251 77 ntBASIC1.36□□□□□ -2.19
CD44P16070 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.36□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 193 ms