Protein–RNA interactions for Protein: P14543

NID1, Nidogen-1, humanhuman

Predictions only

Length 1,247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NID1P14543 RNU4-33P-201ENST00000364316 85 ntBASIC0.99□□□□□ -2.25
NID1P14543 SNORA40B-201ENST00000385573 128 ntBASIC0.99□□□□□ -2.25
NID1P14543 SNORA49-201ENST00000386157 136 ntBASIC0.99□□□□□ -2.25
NID1P14543 SNORA40.8-201ENST00000411034 126 ntBASIC0.99□□□□□ -2.25
NID1P14543 MIR4295-201ENST00000585286 85 ntBASIC0.99□□□□□ -2.25
NID1P14543 Y_RNA.423-201ENST00000384057 113 ntBASIC0.98□□□□□ -2.25
NID1P14543 SNORD71-201ENST00000411292 86 ntBASIC0.98□□□□□ -2.25
NID1P14543 AC087343.1-201ENST00000477341 475 ntBASIC0.98□□□□□ -2.25
NID1P14543 SNORD1B-201ENST00000363091 84 ntBASIC0.97□□□□□ -2.25
NID1P14543 RNU6-810P-201ENST00000364001 107 ntBASIC0.97□□□□□ -2.25
NID1P14543 MIRLET7B-201ENST00000385140 83 ntBASIC0.97□□□□□ -2.25
NID1P14543 RNU6-172P-201ENST00000411000 93 ntBASIC0.97□□□□□ -2.25
NID1P14543 Y_RNA.109-201ENST00000363215 102 ntBASIC0.96□□□□□ -2.26
NID1P14543 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC0.96□□□□□ -2.26
NID1P14543 RNU6-175P-201ENST00000516896 107 ntBASIC0.96□□□□□ -2.26
NID1P14543 MIR548AG1-201ENST00000579932 66 ntBASIC0.96□□□□□ -2.26
NID1P14543 MIR548X-201ENST00000580069 75 ntBASIC0.96□□□□□ -2.26
NID1P14543 SNORD114-21-201ENST00000606412 72 ntBASIC0.96□□□□□ -2.26
NID1P14543 RNU6-35P-201ENST00000384530 107 ntBASIC0.95□□□□□ -2.26
NID1P14543 MIR4677-201ENST00000584153 80 ntBASIC0.95□□□□□ -2.26
NID1P14543 AC084368.1-201ENST00000620935 65 ntBASIC0.95□□□□□ -2.26
NID1P14543 RNU6-1036P-201ENST00000383959 104 ntBASIC0.94□□□□□ -2.26
NID1P14543 DLEU2_4.2-201ENST00000616613 58 ntBASIC0.94□□□□□ -2.26
NID1P14543 RNU6-502P-201ENST00000362419 108 ntBASIC0.93□□□□□ -2.26
NID1P14543 RNU6-458P-201ENST00000384179 107 ntBASIC0.93□□□□□ -2.26
NID1P14543 MIR608-201ENST00000384820 100 ntBASIC0.93□□□□□ -2.26
NID1P14543 MIR501-201ENST00000390204 84 ntBASIC0.93□□□□□ -2.26
NID1P14543 RNU6-1232P-201ENST00000516299 86 ntBASIC0.93□□□□□ -2.26
NID1P14543 RNU6-782P-201ENST00000516852 104 ntBASIC0.93□□□□□ -2.26
NID1P14543 U6.58-201ENST00000613107 107 ntBASIC0.93□□□□□ -2.26
NID1P14543 RNU4-38P-201ENST00000364472 129 ntBASIC0.92□□□□□ -2.26
NID1P14543 RNU6-930P-201ENST00000390938 100 ntBASIC0.92□□□□□ -2.26
NID1P14543 RNU6-848P-201ENST00000515948 107 ntBASIC0.92□□□□□ -2.26
NID1P14543 RNU6-617P-201ENST00000516147 107 ntBASIC0.92□□□□□ -2.26
NID1P14543 RNU6-473P-201ENST00000516164 107 ntBASIC0.92□□□□□ -2.26
NID1P14543 RNU6-1049P-201ENST00000516414 107 ntBASIC0.92□□□□□ -2.26
NID1P14543 AC103810.9-201ENST00000606688 112 ntBASIC0.92□□□□□ -2.26
NID1P14543 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC0.92□□□□□ -2.26
NID1P14543 MIR518A1-201ENST00000385068 85 ntBASIC0.91□□□□□ -2.26
NID1P14543 MIR760-201ENST00000390220 80 ntBASIC0.9□□□□□ -2.27
NID1P14543 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.9□□□□□ -2.27
NID1P14543 RNU4-54P-201ENST00000516428 129 ntBASIC0.9□□□□□ -2.27
NID1P14543 MIR5000-201ENST00000577717 103 ntBASIC0.89□□□□□ -2.27
NID1P14543 AC211469.2-201ENST00000605461 205 ntBASIC0.89□□□□□ -2.27
NID1P14543 MIR6755-201ENST00000619993 66 ntBASIC0.89□□□□□ -2.27
NID1P14543 MIR373-201ENST00000362273 69 ntBASIC0.88□□□□□ -2.27
NID1P14543 Y_RNA.374-201ENST00000365606 101 ntBASIC0.88□□□□□ -2.27
NID1P14543 RPL39P28-201ENST00000465655 155 ntBASIC0.88□□□□□ -2.27
NID1P14543 RNU6-110P-201ENST00000384508 104 ntBASIC0.87□□□□□ -2.27
NID1P14543 MIR216A-201ENST00000385063 110 ntBASIC0.87□□□□□ -2.27
NID1P14543 MIR4698-201ENST00000577795 80 ntBASIC0.87□□□□□ -2.27
NID1P14543 MIR3973-201ENST00000579824 107 ntBASIC0.87□□□□□ -2.27
NID1P14543 RN7SL793P-201ENST00000583259 296 ntBASIC0.87□□□□□ -2.27
NID1P14543 AL590095.2-201ENST00000604136 117 ntBASIC0.87□□□□□ -2.27
NID1P14543 Y_RNA.30-201ENST00000362572 97 ntBASIC0.86□□□□□ -2.27
NID1P14543 MIR532-201ENST00000385025 91 ntBASIC0.86□□□□□ -2.27
NID1P14543 MIR4490-201ENST00000582647 84 ntBASIC0.86□□□□□ -2.27
NID1P14543 AL353803.5-201ENST00000599815 141 ntBASIC0.86□□□□□ -2.27
NID1P14543 RN7SL660P-201ENST00000614852 299 ntBASIC0.86□□□□□ -2.27
NID1P14543 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.86□□□□□ -2.27
NID1P14543 RNA5SP128-201ENST00000365305 116 ntBASIC0.85□□□□□ -2.27
NID1P14543 AC098934.3-201ENST00000430450 190 ntBASIC0.85□□□□□ -2.27
NID1P14543 RNU6-419P-201ENST00000517030 63 ntBASIC0.85□□□□□ -2.27
NID1P14543 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.85□□□□□ -2.27
NID1P14543 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC0.84□□□□□ -2.27
NID1P14543 CYP3A137P-201ENST00000562436 69 ntBASIC0.84□□□□□ -2.27
NID1P14543 MIR876-201ENST00000401147 81 ntBASIC0.83□□□□□ -2.28
NID1P14543 RNU7-129P-201ENST00000516128 62 ntBASIC0.83□□□□□ -2.28
NID1P14543 RNU7-160P-201ENST00000516660 62 ntBASIC0.83□□□□□ -2.28
NID1P14543 RNU6-598P-201ENST00000364017 105 ntBASIC0.82□□□□□ -2.28
NID1P14543 MIR579-201ENST00000385221 98 ntBASIC0.82□□□□□ -2.28
NID1P14543 MIR548F3-201ENST00000408509 87 ntBASIC0.82□□□□□ -2.28
NID1P14543 AP000676.1-201ENST00000533307 52 ntBASIC0.82□□□□□ -2.28
NID1P14543 MIR3925-201ENST00000584674 77 ntBASIC0.82□□□□□ -2.28
NID1P14543 MIR6857-201ENST00000613267 93 ntBASIC0.82□□□□□ -2.28
NID1P14543 SNORD115-23-201ENST00000364461 82 ntBASIC0.81□□□□□ -2.28
NID1P14543 MIR4714-201ENST00000580728 77 ntBASIC0.81□□□□□ -2.28
NID1P14543 MIR4653-201ENST00000585107 83 ntBASIC0.81□□□□□ -2.28
NID1P14543 snoR1.1-201ENST00000628177 80 ntBASIC0.81□□□□□ -2.28
NID1P14543 MIR499B-201ENST00000636498 73 ntBASIC0.81□□□□□ -2.28
NID1P14543 RNU6-838P-201ENST00000363399 108 ntBASIC0.8□□□□□ -2.28
NID1P14543 MIR106A-201ENST00000384870 81 ntBASIC0.8□□□□□ -2.28
NID1P14543 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.8□□□□□ -2.28
NID1P14543 RNU6-863P-201ENST00000515989 104 ntBASIC0.8□□□□□ -2.28
NID1P14543 RNU7-151P-201ENST00000516930 53 ntBASIC0.8□□□□□ -2.28
NID1P14543 U2.18-201ENST00000622185 84 ntBASIC0.8□□□□□ -2.28
NID1P14543 PSMC1P5-201ENST00000512850 177 ntBASIC0.79□□□□□ -2.28
NID1P14543 RNU6-1206P-201ENST00000516339 103 ntBASIC0.79□□□□□ -2.28
NID1P14543 MIR4432-201ENST00000581823 84 ntBASIC0.79□□□□□ -2.28
NID1P14543 AC108676.2-201ENST00000605225 163 ntBASIC0.79□□□□□ -2.28
NID1P14543 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.79□□□□□ -2.28
NID1P14543 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.79□□□□□ -2.28
NID1P14543 SNORD114-2-201ENST00000363953 78 ntBASIC0.78□□□□□ -2.28
NID1P14543 SCARNA11.2-201ENST00000517183 154 ntBASIC0.78□□□□□ -2.28
NID1P14543 RNU6-247P-201ENST00000362636 107 ntBASIC0.77□□□□□ -2.29
NID1P14543 RNU6-995P-201ENST00000391244 107 ntBASIC0.77□□□□□ -2.29
NID1P14543 RNU6-351P-201ENST00000516097 100 ntBASIC0.77□□□□□ -2.29
NID1P14543 Y_RNA.69-201ENST00000362885 109 ntBASIC0.76□□□□□ -2.29
NID1P14543 RNA5SP98-201ENST00000363158 137 ntBASIC0.75□□□□□ -2.29
NID1P14543 MIR193B-201ENST00000384907 83 ntBASIC0.75□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 371.4 ms