Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 Y_RNA.74-201ENST00000362911 99 ntBASIC1.05□□□□□ -2.24
CSB-PGBD3P0DP91 Y_RNA.282-201ENST00000364793 102 ntBASIC1.05□□□□□ -2.24
CSB-PGBD3P0DP91 RNU6-175P-201ENST00000516896 107 ntBASIC1.05□□□□□ -2.24
CSB-PGBD3P0DP91 RNU6-231P-201ENST00000517122 103 ntBASIC1.05□□□□□ -2.24
CSB-PGBD3P0DP91 AL590095.2-201ENST00000604136 117 ntBASIC1.05□□□□□ -2.24
CSB-PGBD3P0DP91 Y_RNA.374-201ENST00000365606 101 ntBASIC1.04□□□□□ -2.24
CSB-PGBD3P0DP91 SNORA2A-201ENST00000383885 135 ntBASIC1.04□□□□□ -2.24
CSB-PGBD3P0DP91 SNORD116-16-201ENST00000384533 92 ntBASIC1.04□□□□□ -2.24
CSB-PGBD3P0DP91 RNU6ATAC27P-201ENST00000408289 119 ntBASIC1.04□□□□□ -2.24
CSB-PGBD3P0DP91 RNU6-229P-201ENST00000516614 102 ntBASIC1.04□□□□□ -2.24
CSB-PGBD3P0DP91 AC103810.9-201ENST00000606688 112 ntBASIC1.04□□□□□ -2.24
CSB-PGBD3P0DP91 MIR6755-201ENST00000619993 66 ntBASIC1.04□□□□□ -2.24
CSB-PGBD3P0DP91 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC1.03□□□□□ -2.24
CSB-PGBD3P0DP91 SNORD114-2-201ENST00000363953 78 ntBASIC1.03□□□□□ -2.24
CSB-PGBD3P0DP91 SNORD114-29-201ENST00000364819 70 ntBASIC1.03□□□□□ -2.24
CSB-PGBD3P0DP91 SNORA40.8-201ENST00000411034 126 ntBASIC1.03□□□□□ -2.24
CSB-PGBD3P0DP91 MIR6773-201ENST00000612812 74 ntBASIC1.03□□□□□ -2.24
CSB-PGBD3P0DP91 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC1.02□□□□□ -2.25
CSB-PGBD3P0DP91 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC1.02□□□□□ -2.25
CSB-PGBD3P0DP91 MIR501-201ENST00000390204 84 ntBASIC1.02□□□□□ -2.25
CSB-PGBD3P0DP91 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC1.02□□□□□ -2.25
CSB-PGBD3P0DP91 MIR6866-201ENST00000638146 69 ntBASIC1.02□□□□□ -2.25
CSB-PGBD3P0DP91 MIR527-201ENST00000385244 85 ntBASIC1.01□□□□□ -2.25
CSB-PGBD3P0DP91 MIR936-201ENST00000401264 98 ntBASIC1.01□□□□□ -2.25
CSB-PGBD3P0DP91 MIR1273G-201ENST00000577677 100 ntBASIC1.01□□□□□ -2.25
CSB-PGBD3P0DP91 MIR4677-201ENST00000584153 80 ntBASIC1.01□□□□□ -2.25
CSB-PGBD3P0DP91 Y_RNA.30-201ENST00000362572 97 ntBASIC1□□□□□ -2.25
CSB-PGBD3P0DP91 RNU7-119P-201ENST00000459279 63 ntBASIC1□□□□□ -2.25
CSB-PGBD3P0DP91 SNORD115-25-201ENST00000362619 82 ntBASIC0.99□□□□□ -2.25
CSB-PGBD3P0DP91 MIR518A1-201ENST00000385068 85 ntBASIC0.99□□□□□ -2.25
CSB-PGBD3P0DP91 RNU6-351P-201ENST00000516097 100 ntBASIC0.99□□□□□ -2.25
CSB-PGBD3P0DP91 SNORD116.2-201ENST00000391251 93 ntBASIC0.98□□□□□ -2.25
CSB-PGBD3P0DP91 SNORD71-201ENST00000411292 86 ntBASIC0.98□□□□□ -2.25
CSB-PGBD3P0DP91 SNORD114-23-201ENST00000363536 72 ntBASIC0.97□□□□□ -2.25
CSB-PGBD3P0DP91 SNORA40.16-201ENST00000517238 121 ntBASIC0.97□□□□□ -2.25
CSB-PGBD3P0DP91 U7.6-201ENST00000610841 64 ntBASIC0.97□□□□□ -2.25
CSB-PGBD3P0DP91 RNU6-1036P-201ENST00000383959 104 ntBASIC0.96□□□□□ -2.26
CSB-PGBD3P0DP91 MIRLET7B-201ENST00000385140 83 ntBASIC0.96□□□□□ -2.26
CSB-PGBD3P0DP91 RNU4-88P-201ENST00000411220 86 ntBASIC0.96□□□□□ -2.26
CSB-PGBD3P0DP91 SNORD2-201ENST00000459163 69 ntBASIC0.96□□□□□ -2.26
CSB-PGBD3P0DP91 RN7SL660P-201ENST00000614852 299 ntBASIC0.96□□□□□ -2.26
CSB-PGBD3P0DP91 RNU6-502P-201ENST00000362419 108 ntBASIC0.95□□□□□ -2.26
CSB-PGBD3P0DP91 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC0.95□□□□□ -2.26
CSB-PGBD3P0DP91 MIR760-201ENST00000390220 80 ntBASIC0.94□□□□□ -2.26
CSB-PGBD3P0DP91 RNU7-154P-201ENST00000516194 62 ntBASIC0.94□□□□□ -2.26
CSB-PGBD3P0DP91 RNU6-980P-201ENST00000516925 103 ntBASIC0.94□□□□□ -2.26
CSB-PGBD3P0DP91 AC084368.1-201ENST00000620935 65 ntBASIC0.94□□□□□ -2.26
CSB-PGBD3P0DP91 SNORD1B-201ENST00000363091 84 ntBASIC0.93□□□□□ -2.26
CSB-PGBD3P0DP91 Y_RNA.109-201ENST00000363215 102 ntBASIC0.93□□□□□ -2.26
CSB-PGBD3P0DP91 Y_RNA.379-201ENST00000365653 102 ntBASIC0.93□□□□□ -2.26
CSB-PGBD3P0DP91 RNU6-945P-201ENST00000383947 107 ntBASIC0.93□□□□□ -2.26
CSB-PGBD3P0DP91 MIR146A-201ENST00000385201 99 ntBASIC0.93□□□□□ -2.26
CSB-PGBD3P0DP91 AC098934.3-201ENST00000430450 190 ntBASIC0.93□□□□□ -2.26
CSB-PGBD3P0DP91 RNU6-782P-201ENST00000516852 104 ntBASIC0.93□□□□□ -2.26
CSB-PGBD3P0DP91 MIR3925-201ENST00000584674 77 ntBASIC0.93□□□□□ -2.26
CSB-PGBD3P0DP91 MIR7110-201ENST00000612638 86 ntBASIC0.93□□□□□ -2.26
CSB-PGBD3P0DP91 RNU6-753P-201ENST00000363926 107 ntBASIC0.92□□□□□ -2.26
CSB-PGBD3P0DP91 RNU6ATAC29P-201ENST00000408088 125 ntBASIC0.92□□□□□ -2.26
CSB-PGBD3P0DP91 RNA5SP347-201ENST00000362445 119 ntBASIC0.91□□□□□ -2.26
CSB-PGBD3P0DP91 MIR499B-201ENST00000636498 73 ntBASIC0.91□□□□□ -2.26
CSB-PGBD3P0DP91 AC010487.4-201ENST00000637027 61 ntBASIC0.91□□□□□ -2.26
CSB-PGBD3P0DP91 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.91□□□□□ -2.26
CSB-PGBD3P0DP91 RNU6-246P-201ENST00000384702 107 ntBASIC0.9□□□□□ -2.27
CSB-PGBD3P0DP91 RNA5SP193-201ENST00000410353 107 ntBASIC0.9□□□□□ -2.27
CSB-PGBD3P0DP91 RNU6-810P-201ENST00000364001 107 ntBASIC0.89□□□□□ -2.27
CSB-PGBD3P0DP91 RNU6-172P-201ENST00000411000 93 ntBASIC0.89□□□□□ -2.27
CSB-PGBD3P0DP91 RNA5SP470-201ENST00000516463 106 ntBASIC0.89□□□□□ -2.27
CSB-PGBD3P0DP91 MIR4711-201ENST00000578274 70 ntBASIC0.89□□□□□ -2.27
CSB-PGBD3P0DP91 Y_RNA.115-201ENST00000363272 98 ntBASIC0.88□□□□□ -2.27
CSB-PGBD3P0DP91 RNA5SP128-201ENST00000365305 116 ntBASIC0.88□□□□□ -2.27
CSB-PGBD3P0DP91 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC0.88□□□□□ -2.27
CSB-PGBD3P0DP91 RNU6-848P-201ENST00000515948 107 ntBASIC0.88□□□□□ -2.27
CSB-PGBD3P0DP91 RNU6-617P-201ENST00000516147 107 ntBASIC0.88□□□□□ -2.27
CSB-PGBD3P0DP91 RNU6-473P-201ENST00000516164 107 ntBASIC0.88□□□□□ -2.27
CSB-PGBD3P0DP91 RNU6-1049P-201ENST00000516414 107 ntBASIC0.88□□□□□ -2.27
CSB-PGBD3P0DP91 RNU6-458P-201ENST00000384179 107 ntBASIC0.87□□□□□ -2.27
CSB-PGBD3P0DP91 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.87□□□□□ -2.27
CSB-PGBD3P0DP91 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC0.87□□□□□ -2.27
CSB-PGBD3P0DP91 U6.58-201ENST00000613107 107 ntBASIC0.87□□□□□ -2.27
CSB-PGBD3P0DP91 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.87□□□□□ -2.27
CSB-PGBD3P0DP91 SNORA40B-201ENST00000385573 128 ntBASIC0.86□□□□□ -2.27
CSB-PGBD3P0DP91 MIR876-201ENST00000401147 81 ntBASIC0.86□□□□□ -2.27
CSB-PGBD3P0DP91 RNU7-129P-201ENST00000516128 62 ntBASIC0.86□□□□□ -2.27
CSB-PGBD3P0DP91 RNA5SP330-201ENST00000517096 96 ntBASIC0.86□□□□□ -2.27
CSB-PGBD3P0DP91 MIR924-201ENST00000638017 53 ntBASIC0.86□□□□□ -2.27
CSB-PGBD3P0DP91 RNA5SP457-201ENST00000363657 124 ntBASIC0.85□□□□□ -2.27
CSB-PGBD3P0DP91 RNA5SP121-201ENST00000516537 101 ntBASIC0.85□□□□□ -2.27
CSB-PGBD3P0DP91 AP000676.1-201ENST00000533307 52 ntBASIC0.84□□□□□ -2.27
CSB-PGBD3P0DP91 AL353803.5-201ENST00000599815 141 ntBASIC0.84□□□□□ -2.27
CSB-PGBD3P0DP91 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC0.84□□□□□ -2.28
CSB-PGBD3P0DP91 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.83□□□□□ -2.28
CSB-PGBD3P0DP91 RNU4-33P-201ENST00000364316 85 ntBASIC0.83□□□□□ -2.28
CSB-PGBD3P0DP91 RNU6-35P-201ENST00000384530 107 ntBASIC0.83□□□□□ -2.28
CSB-PGBD3P0DP91 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC0.83□□□□□ -2.28
CSB-PGBD3P0DP91 SNORD44.1-201ENST00000363202 61 ntBASIC0.82□□□□□ -2.28
CSB-PGBD3P0DP91 MIR4490-201ENST00000582647 84 ntBASIC0.82□□□□□ -2.28
CSB-PGBD3P0DP91 RNA5SP499-201ENST00000363982 119 ntBASIC0.81□□□□□ -2.28
CSB-PGBD3P0DP91 SNORD115-23-201ENST00000364461 82 ntBASIC0.81□□□□□ -2.28
CSB-PGBD3P0DP91 SCARNA11.2-201ENST00000517183 154 ntBASIC0.81□□□□□ -2.28
CSB-PGBD3P0DP91 RNU6-598P-201ENST00000364017 105 ntBASIC0.8□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 227.4 ms