Protein–RNA interactions for Protein: P04264

KRT1, Keratin, type II cytoskeletal 1, humanhuman

Predictions only

Length 644 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT1P04264 RNA5SP470-201ENST00000516463 106 ntBASIC0.95□□□□□ -2.26
KRT1P04264 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.94□□□□□ -2.26
KRT1P04264 RPL39P28-201ENST00000465655 155 ntBASIC0.94□□□□□ -2.26
KRT1P04264 MIR4752-201ENST00000579672 72 ntBASIC0.94□□□□□ -2.26
KRT1P04264 U7.6-201ENST00000610841 64 ntBASIC0.94□□□□□ -2.26
KRT1P04264 RNA5SP222-201ENST00000411039 105 ntBASIC0.93□□□□□ -2.26
KRT1P04264 PSMC1P5-201ENST00000512850 177 ntBASIC0.93□□□□□ -2.26
KRT1P04264 RNU6-810P-201ENST00000364001 107 ntBASIC0.92□□□□□ -2.26
KRT1P04264 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC0.92□□□□□ -2.26
KRT1P04264 SNORD115-25-201ENST00000362619 82 ntBASIC0.91□□□□□ -2.26
KRT1P04264 MIR216A-201ENST00000385063 110 ntBASIC0.91□□□□□ -2.26
KRT1P04264 RNU6-172P-201ENST00000411000 93 ntBASIC0.91□□□□□ -2.26
KRT1P04264 AC098934.3-201ENST00000430450 190 ntBASIC0.91□□□□□ -2.26
KRT1P04264 MIR6773-201ENST00000612812 74 ntBASIC0.91□□□□□ -2.26
KRT1P04264 AL627230.5-201ENST00000619807 58 ntBASIC0.91□□□□□ -2.26
KRT1P04264 RNA5SP62-201ENST00000363457 110 ntBASIC0.9□□□□□ -2.27
KRT1P04264 MIR608-201ENST00000384820 100 ntBASIC0.9□□□□□ -2.27
KRT1P04264 MIR532-201ENST00000385025 91 ntBASIC0.9□□□□□ -2.27
KRT1P04264 RNU6-337P-201ENST00000391243 106 ntBASIC0.9□□□□□ -2.27
KRT1P04264 MIR5000-201ENST00000577717 103 ntBASIC0.9□□□□□ -2.27
KRT1P04264 SNORD1B-201ENST00000363091 84 ntBASIC0.89□□□□□ -2.27
KRT1P04264 SNORD114-2-201ENST00000363953 78 ntBASIC0.89□□□□□ -2.27
KRT1P04264 MIR4698-201ENST00000577795 80 ntBASIC0.89□□□□□ -2.27
KRT1P04264 RNU1-29P-201ENST00000606574 126 ntBASIC0.89□□□□□ -2.27
KRT1P04264 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.89□□□□□ -2.27
KRT1P04264 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.88□□□□□ -2.27
KRT1P04264 Y_RNA.109-201ENST00000363215 102 ntBASIC0.88□□□□□ -2.27
KRT1P04264 RNA5SP457-201ENST00000363657 124 ntBASIC0.88□□□□□ -2.27
KRT1P04264 SNORA2A-201ENST00000383885 135 ntBASIC0.88□□□□□ -2.27
KRT1P04264 RNY1P8-201ENST00000383970 114 ntBASIC0.88□□□□□ -2.27
KRT1P04264 AC069271.1-201ENST00000445577 156 ntBASIC0.88□□□□□ -2.27
KRT1P04264 AL353765.1-201ENST00000605514 183 ntBASIC0.88□□□□□ -2.27
KRT1P04264 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.88□□□□□ -2.27
KRT1P04264 RNA5SP517-201ENST00000364724 117 ntBASIC0.87□□□□□ -2.27
KRT1P04264 MIR548F3-201ENST00000408509 87 ntBASIC0.87□□□□□ -2.27
KRT1P04264 MIR4653-201ENST00000585107 83 ntBASIC0.87□□□□□ -2.27
KRT1P04264 RNU6-838P-201ENST00000363399 108 ntBASIC0.86□□□□□ -2.27
KRT1P04264 RNU6-458P-201ENST00000384179 107 ntBASIC0.86□□□□□ -2.27
KRT1P04264 MIRLET7B-201ENST00000385140 83 ntBASIC0.86□□□□□ -2.27
KRT1P04264 RNU6-229P-201ENST00000516614 102 ntBASIC0.86□□□□□ -2.27
KRT1P04264 RNU6-419P-201ENST00000517030 63 ntBASIC0.86□□□□□ -2.27
KRT1P04264 RNU7-188P-201ENST00000517063 64 ntBASIC0.86□□□□□ -2.27
KRT1P04264 U6.58-201ENST00000613107 107 ntBASIC0.86□□□□□ -2.27
KRT1P04264 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC0.86□□□□□ -2.27
KRT1P04264 MIR6086-201ENST00000638065 55 ntBASIC0.86□□□□□ -2.27
KRT1P04264 SNORA36.2-201ENST00000384004 127 ntBASIC0.85□□□□□ -2.27
KRT1P04264 SNORA49-201ENST00000386157 136 ntBASIC0.85□□□□□ -2.27
KRT1P04264 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.85□□□□□ -2.27
KRT1P04264 MIR548AG1-201ENST00000579932 66 ntBASIC0.85□□□□□ -2.27
KRT1P04264 MIR193B-201ENST00000384907 83 ntBASIC0.84□□□□□ -2.27
KRT1P04264 MIR140-201ENST00000385282 100 ntBASIC0.84□□□□□ -2.27
KRT1P04264 RNU6-848P-201ENST00000515948 107 ntBASIC0.84□□□□□ -2.27
KRT1P04264 RNU6-351P-201ENST00000516097 100 ntBASIC0.84□□□□□ -2.27
KRT1P04264 RNU6-617P-201ENST00000516147 107 ntBASIC0.84□□□□□ -2.27
KRT1P04264 RNU6-473P-201ENST00000516164 107 ntBASIC0.84□□□□□ -2.27
KRT1P04264 RNU6-1049P-201ENST00000516414 107 ntBASIC0.84□□□□□ -2.27
KRT1P04264 MIR3973-201ENST00000579824 107 ntBASIC0.84□□□□□ -2.27
KRT1P04264 MIR4490-201ENST00000582647 84 ntBASIC0.84□□□□□ -2.27
KRT1P04264 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
KRT1P04264 SNORD118-201ENST00000363593 134 ntBASIC0.83□□□□□ -2.28
KRT1P04264 SNORA40.8-201ENST00000411034 126 ntBASIC0.83□□□□□ -2.28
KRT1P04264 RNU7-160P-201ENST00000516660 62 ntBASIC0.83□□□□□ -2.28
KRT1P04264 RNU6-782P-201ENST00000516852 104 ntBASIC0.83□□□□□ -2.28
KRT1P04264 RNU6-175P-201ENST00000516896 107 ntBASIC0.83□□□□□ -2.28
KRT1P04264 MIR1273G-201ENST00000577677 100 ntBASIC0.83□□□□□ -2.28
KRT1P04264 SNORA25.18-201ENST00000607153 114 ntBASIC0.83□□□□□ -2.28
KRT1P04264 MIR6857-201ENST00000613267 93 ntBASIC0.83□□□□□ -2.28
KRT1P04264 MIR373-201ENST00000362273 69 ntBASIC0.82□□□□□ -2.28
KRT1P04264 RNU6-502P-201ENST00000362419 108 ntBASIC0.82□□□□□ -2.28
KRT1P04264 Y_RNA.115-201ENST00000363272 98 ntBASIC0.82□□□□□ -2.28
KRT1P04264 SNORD71-201ENST00000411292 86 ntBASIC0.82□□□□□ -2.28
KRT1P04264 AC084368.1-201ENST00000620935 65 ntBASIC0.82□□□□□ -2.28
KRT1P04264 RNU6-247P-201ENST00000362636 107 ntBASIC0.81□□□□□ -2.28
KRT1P04264 MIR146A-201ENST00000385201 99 ntBASIC0.81□□□□□ -2.28
KRT1P04264 MIR4677-201ENST00000584153 80 ntBASIC0.81□□□□□ -2.28
KRT1P04264 RNU6-1036P-201ENST00000383959 104 ntBASIC0.8□□□□□ -2.28
KRT1P04264 Y_RNA.423-201ENST00000384057 113 ntBASIC0.8□□□□□ -2.28
KRT1P04264 AL590095.2-201ENST00000604136 117 ntBASIC0.8□□□□□ -2.28
KRT1P04264 MIR6866-201ENST00000638146 69 ntBASIC0.8□□□□□ -2.28
KRT1P04264 RNU6-110P-201ENST00000384508 104 ntBASIC0.79□□□□□ -2.28
KRT1P04264 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.79□□□□□ -2.28
KRT1P04264 RNU6-1206P-201ENST00000516339 103 ntBASIC0.79□□□□□ -2.28
KRT1P04264 CYP3A137P-201ENST00000562436 69 ntBASIC0.79□□□□□ -2.28
KRT1P04264 MIR545-201ENST00000385085 106 ntBASIC0.78□□□□□ -2.28
KRT1P04264 AL353803.5-201ENST00000599815 141 ntBASIC0.78□□□□□ -2.28
KRT1P04264 RNU6-598P-201ENST00000364017 105 ntBASIC0.77□□□□□ -2.29
KRT1P04264 MIR501-201ENST00000390204 84 ntBASIC0.77□□□□□ -2.29
KRT1P04264 RNU6-1232P-201ENST00000516299 86 ntBASIC0.77□□□□□ -2.29
KRT1P04264 RNU7-151P-201ENST00000516930 53 ntBASIC0.77□□□□□ -2.29
KRT1P04264 RNA5SP257-201ENST00000363023 116 ntBASIC0.76□□□□□ -2.29
KRT1P04264 MIR518A1-201ENST00000385068 85 ntBASIC0.76□□□□□ -2.29
KRT1P04264 MIR579-201ENST00000385221 98 ntBASIC0.76□□□□□ -2.29
KRT1P04264 RNU6-995P-201ENST00000391244 107 ntBASIC0.76□□□□□ -2.29
KRT1P04264 RNA5SP121-201ENST00000516537 101 ntBASIC0.76□□□□□ -2.29
KRT1P04264 RNA5SP330-201ENST00000517096 96 ntBASIC0.76□□□□□ -2.29
KRT1P04264 MIR548AA1-201ENST00000384971 97 ntBASIC0.75□□□□□ -2.29
KRT1P04264 MIR924-201ENST00000638017 53 ntBASIC0.75□□□□□ -2.29
KRT1P04264 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.74□□□□□ -2.29
KRT1P04264 Y_RNA.69-201ENST00000362885 109 ntBASIC0.74□□□□□ -2.29
KRT1P04264 MIR329-2-201ENST00000385029 84 ntBASIC0.74□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 204.1 ms