Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 RNU7-154P-201ENST00000516194 62 ntBASIC-1.05□□□□□ -2.58
HLA-DQA1P01909 RNU6-479P-201ENST00000516348 105 ntBASIC-1.05□□□□□ -2.58
HLA-DQA1P01909 RNU6-656P-201ENST00000516785 107 ntBASIC-1.05□□□□□ -2.58
HLA-DQA1P01909 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC-1.05□□□□□ -2.58
HLA-DQA1P01909 U7.3-201ENST00000616123 62 ntBASIC-1.05□□□□□ -2.58
HLA-DQA1P01909 MIR6818-201ENST00000621576 65 ntBASIC-1.05□□□□□ -2.58
HLA-DQA1P01909 Y_RNA.107-201ENST00000363190 121 ntBASIC-1.06□□□□□ -2.58
HLA-DQA1P01909 RNU6-340P-201ENST00000364005 107 ntBASIC-1.06□□□□□ -2.58
HLA-DQA1P01909 RNU6-106P-201ENST00000384405 107 ntBASIC-1.06□□□□□ -2.58
HLA-DQA1P01909 RNU6-554P-201ENST00000410466 106 ntBASIC-1.06□□□□□ -2.58
HLA-DQA1P01909 Y_RNA.613-201ENST00000410726 97 ntBASIC-1.06□□□□□ -2.58
HLA-DQA1P01909 RNU7-88P-201ENST00000458752 63 ntBASIC-1.06□□□□□ -2.58
HLA-DQA1P01909 Y_RNA.703-201ENST00000516846 111 ntBASIC-1.06□□□□□ -2.58
HLA-DQA1P01909 Y_RNA.365-201ENST00000365537 102 ntBASIC-1.07□□□□□ -2.58
HLA-DQA1P01909 SNORA19-201ENST00000384737 128 ntBASIC-1.07□□□□□ -2.58
HLA-DQA1P01909 U7.5-201ENST00000517224 61 ntBASIC-1.07□□□□□ -2.58
HLA-DQA1P01909 RNU6-1233P-201ENST00000362922 102 ntBASIC-1.08□□□□□ -2.58
HLA-DQA1P01909 Y_RNA.93-201ENST00000363066 109 ntBASIC-1.08□□□□□ -2.58
HLA-DQA1P01909 RNU6-209P-201ENST00000384118 107 ntBASIC-1.08□□□□□ -2.58
HLA-DQA1P01909 RNU6-959P-201ENST00000384671 107 ntBASIC-1.08□□□□□ -2.58
HLA-DQA1P01909 AL035461.1-201ENST00000421490 332 ntBASIC-1.08□□□□□ -2.58
HLA-DQA1P01909 AL450471.1-201ENST00000447509 127 ntBASIC-1.08□□□□□ -2.58
HLA-DQA1P01909 RNU6-1238P-201ENST00000517215 102 ntBASIC-1.08□□□□□ -2.58
HLA-DQA1P01909 U2.7-201ENST00000619197 100 ntBASIC-1.08□□□□□ -2.58
HLA-DQA1P01909 MIR29B1-201ENST00000385015 81 ntBASIC-1.09□□□□□ -2.58
HLA-DQA1P01909 RNU6-732P-201ENST00000516033 103 ntBASIC-1.09□□□□□ -2.58
HLA-DQA1P01909 MIR4306-201ENST00000583390 91 ntBASIC-1.09□□□□□ -2.58
HLA-DQA1P01909 MIR4324-201ENST00000584846 72 ntBASIC-1.09□□□□□ -2.58
HLA-DQA1P01909 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-1.09□□□□□ -2.58
HLA-DQA1P01909 AL078595.1-201ENST00000404458 226 ntBASIC-1.1□□□□□ -2.59
HLA-DQA1P01909 RNU6-1064P-201ENST00000410626 104 ntBASIC-1.1□□□□□ -2.59
HLA-DQA1P01909 HAR1A.1-201ENST00000459583 118 ntBASIC-1.1□□□□□ -2.59
HLA-DQA1P01909 Y_RNA.818-201ENST00000618813 71 ntBASIC-1.1□□□□□ -2.59
HLA-DQA1P01909 RNU6-330P-201ENST00000363015 107 ntBASIC-1.11□□□□□ -2.59
HLA-DQA1P01909 MIR507-201ENST00000385234 94 ntBASIC-1.11□□□□□ -2.59
HLA-DQA1P01909 MIR889-201ENST00000401280 79 ntBASIC-1.11□□□□□ -2.59
HLA-DQA1P01909 RPL35AP4-201ENST00000412007 102 ntBASIC-1.11□□□□□ -2.59
HLA-DQA1P01909 RNU6-1108P-201ENST00000516308 104 ntBASIC-1.11□□□□□ -2.59
HLA-DQA1P01909 AL365222.1-201ENST00000614661 98 ntBASIC-1.11□□□□□ -2.59
HLA-DQA1P01909 MIR6129-201ENST00000616087 109 ntBASIC-1.11□□□□□ -2.59
HLA-DQA1P01909 Y_RNA.290-201ENST00000364879 114 ntBASIC-1.12□□□□□ -2.59
HLA-DQA1P01909 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC-1.12□□□□□ -2.59
HLA-DQA1P01909 AC008267.6-201ENST00000441664 139 ntBASIC-1.12□□□□□ -2.59
HLA-DQA1P01909 AL021921.1-201ENST00000442774 93 ntBASIC-1.12□□□□□ -2.59
HLA-DQA1P01909 AL353691.2-201ENST00000443795 59 ntBASIC-1.12□□□□□ -2.59
HLA-DQA1P01909 MIR6874-201ENST00000635894 71 ntBASIC-1.12□□□□□ -2.59
HLA-DQA1P01909 RNU6-24P-201ENST00000384440 107 ntBASIC-1.13□□□□□ -2.59
HLA-DQA1P01909 RNU6-752P-201ENST00000516376 102 ntBASIC-1.13□□□□□ -2.59
HLA-DQA1P01909 AC091912.2-201ENST00000624798 167 ntBASIC-1.13□□□□□ -2.59
HLA-DQA1P01909 AC132825.6-201ENST00000638861 357 ntBASIC-1.13□□□□□ -2.59
HLA-DQA1P01909 MIR519C-201ENST00000385053 87 ntBASIC-1.14□□□□□ -2.59
HLA-DQA1P01909 SNORD77.2-201ENST00000391045 68 ntBASIC-1.14□□□□□ -2.59
HLA-DQA1P01909 RNU4-61P-201ENST00000411243 107 ntBASIC-1.14□□□□□ -2.59
HLA-DQA1P01909 RNA5SP67-201ENST00000516422 131 ntBASIC-1.14□□□□□ -2.59
HLA-DQA1P01909 RNU6-1174P-201ENST00000517278 101 ntBASIC-1.14□□□□□ -2.59
HLA-DQA1P01909 RNU6-645P-201ENST00000364649 106 ntBASIC-1.15□□□□□ -2.59
HLA-DQA1P01909 MIR5683-201ENST00000636514 76 ntBASIC-1.15□□□□□ -2.59
HLA-DQA1P01909 RNU6-478P-201ENST00000363904 110 ntBASIC-1.16□□□□□ -2.6
HLA-DQA1P01909 RNU6-681P-201ENST00000364012 104 ntBASIC-1.16□□□□□ -2.6
HLA-DQA1P01909 MIR527-201ENST00000385244 85 ntBASIC-1.16□□□□□ -2.6
HLA-DQA1P01909 MTATP8P2-201ENST00000435212 202 ntBASIC-1.16□□□□□ -2.6
HLA-DQA1P01909 AC090616.4-201ENST00000448026 115 ntBASIC-1.16□□□□□ -2.6
HLA-DQA1P01909 MIR6738-201ENST00000619620 64 ntBASIC-1.16□□□□□ -2.6
HLA-DQA1P01909 RNU6-766P-201ENST00000362478 107 ntBASIC-1.17□□□□□ -2.6
HLA-DQA1P01909 RNU6-81P-201ENST00000365608 104 ntBASIC-1.17□□□□□ -2.6
HLA-DQA1P01909 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC-1.17□□□□□ -2.6
HLA-DQA1P01909 RNU6-589P-201ENST00000516485 107 ntBASIC-1.17□□□□□ -2.6
HLA-DQA1P01909 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC-1.17□□□□□ -2.6
HLA-DQA1P01909 RNU6-624P-201ENST00000363411 107 ntBASIC-1.18□□□□□ -2.6
HLA-DQA1P01909 RNU6-576P-201ENST00000390854 102 ntBASIC-1.18□□□□□ -2.6
HLA-DQA1P01909 RNU6-982P-201ENST00000516216 102 ntBASIC-1.18□□□□□ -2.6
HLA-DQA1P01909 MIR3671-201ENST00000580455 88 ntBASIC-1.18□□□□□ -2.6
HLA-DQA1P01909 RNU6-633P-201ENST00000362612 103 ntBASIC-1.19□□□□□ -2.6
HLA-DQA1P01909 RNU6-164P-201ENST00000364604 103 ntBASIC-1.19□□□□□ -2.6
HLA-DQA1P01909 Y_RNA.325-201ENST00000365171 122 ntBASIC-1.19□□□□□ -2.6
HLA-DQA1P01909 RNU7-174P-201ENST00000516248 59 ntBASIC-1.19□□□□□ -2.6
HLA-DQA1P01909 RNU6-267P-201ENST00000516714 103 ntBASIC-1.19□□□□□ -2.6
HLA-DQA1P01909 MIR3115-201ENST00000577915 68 ntBASIC-1.19□□□□□ -2.6
HLA-DQA1P01909 RNU6-1056P-201ENST00000383996 107 ntBASIC-1.2□□□□□ -2.6
HLA-DQA1P01909 Y_RNA.532-201ENST00000384590 113 ntBASIC-1.2□□□□□ -2.6
HLA-DQA1P01909 Y_RNA.544-201ENST00000384650 113 ntBASIC-1.2□□□□□ -2.6
HLA-DQA1P01909 MIR548C-201ENST00000384815 97 ntBASIC-1.2□□□□□ -2.6
HLA-DQA1P01909 RNU6-807P-201ENST00000516805 107 ntBASIC-1.2□□□□□ -2.6
HLA-DQA1P01909 MIR4668-201ENST00000582284 70 ntBASIC-1.2□□□□□ -2.6
HLA-DQA1P01909 MIR6502-201ENST00000617296 76 ntBASIC-1.2□□□□□ -2.6
HLA-DQA1P01909 MIR409-201ENST00000362237 79 ntBASIC-1.21□□□□□ -2.6
HLA-DQA1P01909 Y_RNA.109-201ENST00000363215 102 ntBASIC-1.21□□□□□ -2.6
HLA-DQA1P01909 Y_RNA.264-201ENST00000364665 102 ntBASIC-1.21□□□□□ -2.6
HLA-DQA1P01909 RNU6-497P-201ENST00000365316 104 ntBASIC-1.21□□□□□ -2.6
HLA-DQA1P01909 RNU6-458P-201ENST00000384179 107 ntBASIC-1.21□□□□□ -2.6
HLA-DQA1P01909 MIR587-201ENST00000384845 96 ntBASIC-1.21□□□□□ -2.6
HLA-DQA1P01909 U6.58-201ENST00000613107 107 ntBASIC-1.21□□□□□ -2.6
HLA-DQA1P01909 SNORD115-37-201ENST00000363768 82 ntBASIC-1.22□□□□□ -2.6
HLA-DQA1P01909 Y_RNA.236-201ENST00000364427 111 ntBASIC-1.22□□□□□ -2.6
HLA-DQA1P01909 RNU6-219P-201ENST00000364728 107 ntBASIC-1.22□□□□□ -2.6
HLA-DQA1P01909 Y_RNA.282-201ENST00000364793 102 ntBASIC-1.22□□□□□ -2.6
HLA-DQA1P01909 MIR520D-201ENST00000385002 87 ntBASIC-1.22□□□□□ -2.6
HLA-DQA1P01909 MIR548Q-201ENST00000408404 100 ntBASIC-1.22□□□□□ -2.6
HLA-DQA1P01909 Y_RNA.620-201ENST00000411009 88 ntBASIC-1.22□□□□□ -2.6
HLA-DQA1P01909 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC-1.22□□□□□ -2.6
Retrieved 100 of 98,524 protein–RNA pairs in 224.8 ms