Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 MIRLET7B-201ENST00000385140 83 ntBASIC1.28□□□□□ -2.2
ALDH1A1P00352 RNA5SP222-201ENST00000411039 105 ntBASIC1.28□□□□□ -2.2
ALDH1A1P00352 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.21
ALDH1A1P00352 MIR429-201ENST00000362106 83 ntBASIC1.27□□□□□ -2.21
ALDH1A1P00352 RNY1P8-201ENST00000383970 114 ntBASIC1.27□□□□□ -2.21
ALDH1A1P00352 RNU6-175P-201ENST00000516896 107 ntBASIC1.27□□□□□ -2.21
ALDH1A1P00352 RNU7-188P-201ENST00000517063 64 ntBASIC1.27□□□□□ -2.21
ALDH1A1P00352 MIR6857-201ENST00000613267 93 ntBASIC1.27□□□□□ -2.21
ALDH1A1P00352 MIR373-201ENST00000362273 69 ntBASIC1.26□□□□□ -2.21
ALDH1A1P00352 RNA5SP517-201ENST00000364724 117 ntBASIC1.26□□□□□ -2.21
ALDH1A1P00352 AC068338.1-201ENST00000565567 176 ntBASIC1.26□□□□□ -2.21
ALDH1A1P00352 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.25□□□□□ -2.21
ALDH1A1P00352 CYP3A137P-201ENST00000562436 69 ntBASIC1.25□□□□□ -2.21
ALDH1A1P00352 RNU6-502P-201ENST00000362419 108 ntBASIC1.24□□□□□ -2.21
ALDH1A1P00352 RNU6-924P-201ENST00000362926 108 ntBASIC1.24□□□□□ -2.21
ALDH1A1P00352 AL353765.1-201ENST00000605514 183 ntBASIC1.24□□□□□ -2.21
ALDH1A1P00352 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC1.23□□□□□ -2.21
ALDH1A1P00352 RNU6-247P-201ENST00000362636 107 ntBASIC1.23□□□□□ -2.21
ALDH1A1P00352 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC1.23□□□□□ -2.21
ALDH1A1P00352 RNU6-598P-201ENST00000364017 105 ntBASIC1.22□□□□□ -2.21
ALDH1A1P00352 RNU7-160P-201ENST00000516660 62 ntBASIC1.22□□□□□ -2.21
ALDH1A1P00352 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC1.22□□□□□ -2.21
ALDH1A1P00352 RNU6-782P-201ENST00000516852 104 ntBASIC1.21□□□□□ -2.22
ALDH1A1P00352 U7.6-201ENST00000610841 64 ntBASIC1.21□□□□□ -2.22
ALDH1A1P00352 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC1.2□□□□□ -2.22
ALDH1A1P00352 SNORD118-201ENST00000363593 134 ntBASIC1.2□□□□□ -2.22
ALDH1A1P00352 SNORA2A-201ENST00000383885 135 ntBASIC1.2□□□□□ -2.22
ALDH1A1P00352 MIR532-201ENST00000385025 91 ntBASIC1.2□□□□□ -2.22
ALDH1A1P00352 MIR579-201ENST00000385221 98 ntBASIC1.2□□□□□ -2.22
ALDH1A1P00352 ACA64.5-201ENST00000516207 127 ntBASIC1.2□□□□□ -2.22
ALDH1A1P00352 RNU6-1232P-201ENST00000516299 86 ntBASIC1.2□□□□□ -2.22
ALDH1A1P00352 RNU6-1206P-201ENST00000516339 103 ntBASIC1.2□□□□□ -2.22
ALDH1A1P00352 SNORA25.18-201ENST00000607153 114 ntBASIC1.2□□□□□ -2.22
ALDH1A1P00352 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.2□□□□□ -2.22
ALDH1A1P00352 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC1.19□□□□□ -2.22
ALDH1A1P00352 RNU7-151P-201ENST00000516930 53 ntBASIC1.19□□□□□ -2.22
ALDH1A1P00352 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.19□□□□□ -2.22
ALDH1A1P00352 Y_RNA.69-201ENST00000362885 109 ntBASIC1.18□□□□□ -2.22
ALDH1A1P00352 MIR193B-201ENST00000384907 83 ntBASIC1.18□□□□□ -2.22
ALDH1A1P00352 MIR140-201ENST00000385282 100 ntBASIC1.18□□□□□ -2.22
ALDH1A1P00352 RNU6-229P-201ENST00000516614 102 ntBASIC1.18□□□□□ -2.22
ALDH1A1P00352 MIR4677-201ENST00000584153 80 ntBASIC1.18□□□□□ -2.22
ALDH1A1P00352 U2.18-201ENST00000622185 84 ntBASIC1.18□□□□□ -2.22
ALDH1A1P00352 Y_RNA.30-201ENST00000362572 97 ntBASIC1.17□□□□□ -2.22
ALDH1A1P00352 RNA5SP457-201ENST00000363657 124 ntBASIC1.17□□□□□ -2.22
ALDH1A1P00352 RNU6-1036P-201ENST00000383959 104 ntBASIC1.17□□□□□ -2.22
ALDH1A1P00352 SNORA36.2-201ENST00000384004 127 ntBASIC1.17□□□□□ -2.22
ALDH1A1P00352 SNORD114-21-201ENST00000606412 72 ntBASIC1.17□□□□□ -2.22
ALDH1A1P00352 RNU4-38P-201ENST00000364472 129 ntBASIC1.16□□□□□ -2.22
ALDH1A1P00352 MIR501-201ENST00000390204 84 ntBASIC1.16□□□□□ -2.22
ALDH1A1P00352 MIR1273G-201ENST00000577677 100 ntBASIC1.16□□□□□ -2.22
ALDH1A1P00352 AL353803.5-201ENST00000599815 141 ntBASIC1.16□□□□□ -2.22
ALDH1A1P00352 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC1.16□□□□□ -2.22
ALDH1A1P00352 Y_RNA.423-201ENST00000384057 113 ntBASIC1.15□□□□□ -2.23
ALDH1A1P00352 MIR3973-201ENST00000579824 107 ntBASIC1.15□□□□□ -2.23
ALDH1A1P00352 AL590095.2-201ENST00000604136 117 ntBASIC1.15□□□□□ -2.23
ALDH1A1P00352 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.15□□□□□ -2.23
ALDH1A1P00352 SNORD115-23-201ENST00000364461 82 ntBASIC1.14□□□□□ -2.23
ALDH1A1P00352 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.13□□□□□ -2.23
ALDH1A1P00352 SNORA40.8-201ENST00000411034 126 ntBASIC1.13□□□□□ -2.23
ALDH1A1P00352 OR2A41P-201ENST00000473586 105 ntBASIC1.13□□□□□ -2.23
ALDH1A1P00352 RN7SL660P-201ENST00000614852 299 ntBASIC1.13□□□□□ -2.23
ALDH1A1P00352 MIR6755-201ENST00000619993 66 ntBASIC1.13□□□□□ -2.23
ALDH1A1P00352 RNU6-848P-201ENST00000515948 107 ntBASIC1.12□□□□□ -2.23
ALDH1A1P00352 RNU6-617P-201ENST00000516147 107 ntBASIC1.12□□□□□ -2.23
ALDH1A1P00352 RNU6-473P-201ENST00000516164 107 ntBASIC1.12□□□□□ -2.23
ALDH1A1P00352 RNU6-1049P-201ENST00000516414 107 ntBASIC1.12□□□□□ -2.23
ALDH1A1P00352 AC084368.1-201ENST00000620935 65 ntBASIC1.12□□□□□ -2.23
ALDH1A1P00352 MIR125B1-201ENST00000385236 88 ntBASIC1.11□□□□□ -2.23
ALDH1A1P00352 MIR548AL-201ENST00000578416 97 ntBASIC1.11□□□□□ -2.23
ALDH1A1P00352 RNU6-986P-201ENST00000363133 102 ntBASIC1.1□□□□□ -2.23
ALDH1A1P00352 Y_RNA.178-201ENST00000363832 102 ntBASIC1.1□□□□□ -2.23
ALDH1A1P00352 RNU6-1250P-201ENST00000391218 107 ntBASIC1.1□□□□□ -2.23
ALDH1A1P00352 RNU6-1262P-201ENST00000516217 96 ntBASIC1.1□□□□□ -2.23
ALDH1A1P00352 RNU4-54P-201ENST00000516428 129 ntBASIC1.1□□□□□ -2.23
ALDH1A1P00352 MIR329-2-201ENST00000385029 84 ntBASIC1.09□□□□□ -2.23
ALDH1A1P00352 Y_RNA.698-201ENST00000516798 118 ntBASIC1.09□□□□□ -2.23
ALDH1A1P00352 MIR4661-201ENST00000582720 75 ntBASIC1.09□□□□□ -2.23
ALDH1A1P00352 MIR6513-201ENST00000621188 64 ntBASIC1.09□□□□□ -2.23
ALDH1A1P00352 MIR548AA1-201ENST00000384971 97 ntBASIC1.08□□□□□ -2.24
ALDH1A1P00352 AC108676.2-201ENST00000605225 163 ntBASIC1.08□□□□□ -2.24
ALDH1A1P00352 RNU6-828P-201ENST00000364876 107 ntBASIC1.07□□□□□ -2.24
ALDH1A1P00352 MIR518A1-201ENST00000385068 85 ntBASIC1.07□□□□□ -2.24
ALDH1A1P00352 RNU6-696P-201ENST00000390834 107 ntBASIC1.07□□□□□ -2.24
ALDH1A1P00352 MIR876-201ENST00000401147 81 ntBASIC1.07□□□□□ -2.24
ALDH1A1P00352 MIR1285-1-201ENST00000408593 84 ntBASIC1.07□□□□□ -2.24
ALDH1A1P00352 AL451105.1-201ENST00000450005 189 ntBASIC1.07□□□□□ -2.24
ALDH1A1P00352 MIR4714-201ENST00000580728 77 ntBASIC1.07□□□□□ -2.24
ALDH1A1P00352 MIR3925-201ENST00000584674 77 ntBASIC1.07□□□□□ -2.24
ALDH1A1P00352 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
ALDH1A1P00352 SNORD71-201ENST00000411292 86 ntBASIC1.06□□□□□ -2.24
ALDH1A1P00352 MIR924-201ENST00000638017 53 ntBASIC1.06□□□□□ -2.24
ALDH1A1P00352 RNU6-995P-201ENST00000391244 107 ntBASIC1.05□□□□□ -2.24
ALDH1A1P00352 MIR4432-201ENST00000581823 84 ntBASIC1.05□□□□□ -2.24
ALDH1A1P00352 AC010487.4-201ENST00000637027 61 ntBASIC1.05□□□□□ -2.24
ALDH1A1P00352 SNORD114-23-201ENST00000363536 72 ntBASIC1.04□□□□□ -2.24
ALDH1A1P00352 MIR608-201ENST00000384820 100 ntBASIC1.04□□□□□ -2.24
ALDH1A1P00352 MIR106A-201ENST00000384870 81 ntBASIC1.04□□□□□ -2.24
ALDH1A1P00352 MIR760-201ENST00000390220 80 ntBASIC1.04□□□□□ -2.24
ALDH1A1P00352 RNU6-1267P-201ENST00000410747 107 ntBASIC1.04□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 179 ms