Protein–RNA interactions for Protein: O75607

NPM3, Nucleoplasmin-3, humanhuman

Known RBP Predictions only

Length 178 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPM3O75607 MIR518A1-201ENST00000385068 85 ntBASIC1.87□□□□□ -2.11
NPM3O75607 MIR876-201ENST00000401147 81 ntBASIC1.85□□□□□ -2.11
NPM3O75607 SNORD57-201ENST00000448188 72 ntBASIC1.85□□□□□ -2.11
NPM3O75607 BX248123.2-201ENST00000606318 124 ntBASIC1.85□□□□□ -2.11
NPM3O75607 Y_RNA.139-201ENST00000363464 102 ntBASIC1.84□□□□□ -2.11
NPM3O75607 RNU1-42P-201ENST00000364033 160 ntBASIC1.84□□□□□ -2.11
NPM3O75607 MIR106A-201ENST00000384870 81 ntBASIC1.84□□□□□ -2.11
NPM3O75607 SNORA67.6-201ENST00000391093 99 ntBASIC1.84□□□□□ -2.11
NPM3O75607 SNORD63.1-201ENST00000516178 80 ntBASIC1.83□□□□□ -2.12
NPM3O75607 AL590095.2-201ENST00000604136 117 ntBASIC1.83□□□□□ -2.12
NPM3O75607 U7.5-201ENST00000517224 61 ntBASIC1.82□□□□□ -2.12
NPM3O75607 MIR6755-201ENST00000619993 66 ntBASIC1.82□□□□□ -2.12
NPM3O75607 uc_338.20-201ENST00000621563 178 ntBASIC1.82□□□□□ -2.12
NPM3O75607 RNU6-822P-201ENST00000362707 106 ntBASIC1.81□□□□□ -2.12
NPM3O75607 RNA5SP128-201ENST00000365305 116 ntBASIC1.81□□□□□ -2.12
NPM3O75607 SNORA31.24-201ENST00000517232 57 ntBASIC1.81□□□□□ -2.12
NPM3O75607 SNORA62.4-201ENST00000365504 151 ntBASIC1.8□□□□□ -2.12
NPM3O75607 MIR1323-201ENST00000408090 73 ntBASIC1.8□□□□□ -2.12
NPM3O75607 Y_RNA.698-201ENST00000516798 118 ntBASIC1.8□□□□□ -2.12
NPM3O75607 RNA5SP364-201ENST00000516938 78 ntBASIC1.8□□□□□ -2.12
NPM3O75607 Y_RNA.164-201ENST00000363709 102 ntBASIC1.79□□□□□ -2.12
NPM3O75607 TRMT112P2-201ENST00000512910 132 ntBASIC1.79□□□□□ -2.12
NPM3O75607 RNU6-392P-201ENST00000364926 101 ntBASIC1.78□□□□□ -2.12
NPM3O75607 RNU6-742P-201ENST00000365289 107 ntBASIC1.78□□□□□ -2.12
NPM3O75607 RNU6-997P-201ENST00000384725 107 ntBASIC1.78□□□□□ -2.12
NPM3O75607 MIR608-201ENST00000384820 100 ntBASIC1.78□□□□□ -2.12
NPM3O75607 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.78□□□□□ -2.12
NPM3O75607 RNU6-721P-201ENST00000410155 105 ntBASIC1.77□□□□□ -2.13
NPM3O75607 RNA5SP247-201ENST00000411181 105 ntBASIC1.77□□□□□ -2.13
NPM3O75607 RNU4-54P-201ENST00000516428 129 ntBASIC1.77□□□□□ -2.13
NPM3O75607 MIR4421-201ENST00000578133 69 ntBASIC1.77□□□□□ -2.13
NPM3O75607 RNU7-88P-201ENST00000458752 63 ntBASIC1.76□□□□□ -2.13
NPM3O75607 RNU6-1174P-201ENST00000517278 101 ntBASIC1.76□□□□□ -2.13
NPM3O75607 MIR3925-201ENST00000584674 77 ntBASIC1.76□□□□□ -2.13
NPM3O75607 RNU6-863P-201ENST00000515989 104 ntBASIC1.75□□□□□ -2.13
NPM3O75607 U6.103-201ENST00000637085 61 ntBASIC1.75□□□□□ -2.13
NPM3O75607 RNA5SP98-201ENST00000363158 137 ntBASIC1.74□□□□□ -2.13
NPM3O75607 Y_RNA.321-201ENST00000365149 102 ntBASIC1.74□□□□□ -2.13
NPM3O75607 RNU6-110P-201ENST00000384508 104 ntBASIC1.74□□□□□ -2.13
NPM3O75607 AC098934.3-201ENST00000430450 190 ntBASIC1.74□□□□□ -2.13
NPM3O75607 Y_RNA.226-201ENST00000364337 114 ntBASIC1.73□□□□□ -2.13
NPM3O75607 RNU6-1133P-201ENST00000410963 100 ntBASIC1.73□□□□□ -2.13
NPM3O75607 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
NPM3O75607 Y_RNA.327-201ENST00000365201 102 ntBASIC1.71□□□□□ -2.14
NPM3O75607 MIR1304-201ENST00000408243 91 ntBASIC1.71□□□□□ -2.14
NPM3O75607 RNU7-129P-201ENST00000516128 62 ntBASIC1.71□□□□□ -2.14
NPM3O75607 SCARNA11.2-201ENST00000517183 154 ntBASIC1.71□□□□□ -2.14
NPM3O75607 MIR8070-201ENST00000616510 88 ntBASIC1.71□□□□□ -2.14
NPM3O75607 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.7□□□□□ -2.14
NPM3O75607 MIR6888-201ENST00000621977 67 ntBASIC1.7□□□□□ -2.14
NPM3O75607 MIR499B-201ENST00000636498 73 ntBASIC1.7□□□□□ -2.14
NPM3O75607 RNU6-955P-201ENST00000410497 104 ntBASIC1.69□□□□□ -2.14
NPM3O75607 MIR29B1-201ENST00000385015 81 ntBASIC1.68□□□□□ -2.14
NPM3O75607 AL445584.3-201ENST00000617173 78 ntBASIC1.68□□□□□ -2.14
NPM3O75607 AL391099.1-201ENST00000624635 187 ntBASIC1.68□□□□□ -2.14
NPM3O75607 MIR320A-201ENST00000385302 82 ntBASIC1.67□□□□□ -2.14
NPM3O75607 SNORD63.2-201ENST00000516303 64 ntBASIC1.67□□□□□ -2.14
NPM3O75607 AL353770.2-201ENST00000620024 78 ntBASIC1.67□□□□□ -2.14
NPM3O75607 MIR150-201ENST00000385048 84 ntBASIC1.66□□□□□ -2.14
NPM3O75607 MIR4464-201ENST00000580818 92 ntBASIC1.65□□□□□ -2.15
NPM3O75607 MIR3660-201ENST00000584845 100 ntBASIC1.65□□□□□ -2.15
NPM3O75607 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC1.64□□□□□ -2.15
NPM3O75607 MIR499A-201ENST00000384903 122 ntBASIC1.64□□□□□ -2.15
NPM3O75607 MIR1287-201ENST00000408492 90 ntBASIC1.64□□□□□ -2.15
NPM3O75607 Y_RNA.613-201ENST00000410726 97 ntBASIC1.64□□□□□ -2.15
NPM3O75607 MIR3122-201ENST00000577243 73 ntBASIC1.64□□□□□ -2.15
NPM3O75607 RNU6-974P-201ENST00000384099 108 ntBASIC1.63□□□□□ -2.15
NPM3O75607 RNU6-1111P-201ENST00000391118 107 ntBASIC1.63□□□□□ -2.15
NPM3O75607 AC104408.1-201ENST00000605241 170 ntBASIC1.63□□□□□ -2.15
NPM3O75607 MIR1276-201ENST00000408707 83 ntBASIC1.62□□□□□ -2.15
NPM3O75607 MIR3170-201ENST00000582699 77 ntBASIC1.62□□□□□ -2.15
NPM3O75607 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
NPM3O75607 RNU6-973P-201ENST00000364690 107 ntBASIC1.6□□□□□ -2.15
NPM3O75607 MTRNR2L9-201ENST00000622562 75 ntBASIC1.6□□□□□ -2.15
NPM3O75607 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
NPM3O75607 RNU6-530P-201ENST00000391180 107 ntBASIC1.58□□□□□ -2.16
NPM3O75607 AC108740.1-201ENST00000498629 225 ntBASIC1.58□□□□□ -2.16
NPM3O75607 uc_338.36-201ENST00000622331 158 ntBASIC1.58□□□□□ -2.16
NPM3O75607 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
NPM3O75607 RNU7-55P-201ENST00000459426 62 ntBASIC1.57□□□□□ -2.16
NPM3O75607 RNA5SP363-201ENST00000365072 115 ntBASIC1.56□□□□□ -2.16
NPM3O75607 RNU6-1223P-201ENST00000517124 104 ntBASIC1.56□□□□□ -2.16
NPM3O75607 MIR6504-201ENST00000613520 61 ntBASIC1.56□□□□□ -2.16
NPM3O75607 uc_338.17-201ENST00000619633 179 ntBASIC1.55□□□□□ -2.16
NPM3O75607 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
NPM3O75607 OR2A41P-201ENST00000473586 105 ntBASIC1.54□□□□□ -2.16
NPM3O75607 AC211469.2-201ENST00000605461 205 ntBASIC1.54□□□□□ -2.16
NPM3O75607 MIR6078-201ENST00000611069 100 ntBASIC1.54□□□□□ -2.16
NPM3O75607 RNU6-900P-201ENST00000384498 102 ntBASIC1.52□□□□□ -2.17
NPM3O75607 RNA5SP61-201ENST00000516453 100 ntBASIC1.52□□□□□ -2.17
NPM3O75607 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.51□□□□□ -2.17
NPM3O75607 RNA5SP102-201ENST00000516865 106 ntBASIC1.51□□□□□ -2.17
NPM3O75607 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.5□□□□□ -2.17
NPM3O75607 MIR1468-201ENST00000410600 86 ntBASIC1.49□□□□□ -2.17
NPM3O75607 AC096531.1-201ENST00000419107 107 ntBASIC1.49□□□□□ -2.17
NPM3O75607 RNU6-59P-201ENST00000384787 107 ntBASIC1.48□□□□□ -2.17
NPM3O75607 RPS29P1-201ENST00000465274 159 ntBASIC1.48□□□□□ -2.17
NPM3O75607 AC068338.1-201ENST00000565567 176 ntBASIC1.48□□□□□ -2.17
NPM3O75607 PSMC1P5-201ENST00000512850 177 ntBASIC1.47□□□□□ -2.17
NPM3O75607 RNU6-732P-201ENST00000516033 103 ntBASIC1.47□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 216.9 ms