Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 SNORD115-23-201ENST00000364461 82 ntBASIC1.28□□□□□ -2.2
RNF40O75150 SNORA2A-201ENST00000383885 135 ntBASIC1.28□□□□□ -2.2
RNF40O75150 RNU7-160P-201ENST00000516660 62 ntBASIC1.28□□□□□ -2.2
RNF40O75150 MIR6755-201ENST00000619993 66 ntBASIC1.28□□□□□ -2.2
RNF40O75150 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
RNF40O75150 RNU6-247P-201ENST00000362636 107 ntBASIC1.27□□□□□ -2.21
RNF40O75150 RNU6-1206P-201ENST00000516339 103 ntBASIC1.27□□□□□ -2.21
RNF40O75150 RNU1-93P-201ENST00000364704 169 ntBASIC1.26□□□□□ -2.21
RNF40O75150 RNU6-1036P-201ENST00000383959 104 ntBASIC1.26□□□□□ -2.21
RNF40O75150 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.25□□□□□ -2.21
RNF40O75150 Y_RNA.69-201ENST00000362885 109 ntBASIC1.25□□□□□ -2.21
RNF40O75150 SNORA36.2-201ENST00000384004 127 ntBASIC1.25□□□□□ -2.21
RNF40O75150 RNU6-229P-201ENST00000516614 102 ntBASIC1.25□□□□□ -2.21
RNF40O75150 U2.18-201ENST00000622185 84 ntBASIC1.25□□□□□ -2.21
RNF40O75150 SNORA40.8-201ENST00000411034 126 ntBASIC1.24□□□□□ -2.21
RNF40O75150 RNU6-848P-201ENST00000515948 107 ntBASIC1.24□□□□□ -2.21
RNF40O75150 RNU6-617P-201ENST00000516147 107 ntBASIC1.24□□□□□ -2.21
RNF40O75150 RNU6-473P-201ENST00000516164 107 ntBASIC1.24□□□□□ -2.21
RNF40O75150 RNU6-1049P-201ENST00000516414 107 ntBASIC1.24□□□□□ -2.21
RNF40O75150 RN7SL660P-201ENST00000614852 299 ntBASIC1.24□□□□□ -2.21
RNF40O75150 MIR520E-201ENST00000384867 87 ntBASIC1.23□□□□□ -2.21
RNF40O75150 MIR579-201ENST00000385221 98 ntBASIC1.23□□□□□ -2.21
RNF40O75150 RNU7-151P-201ENST00000516930 53 ntBASIC1.23□□□□□ -2.21
RNF40O75150 AL353803.5-201ENST00000599815 141 ntBASIC1.23□□□□□ -2.21
RNF40O75150 Y_RNA.423-201ENST00000384057 113 ntBASIC1.22□□□□□ -2.21
RNF40O75150 MIR876-201ENST00000401147 81 ntBASIC1.22□□□□□ -2.21
RNF40O75150 RPS29P1-201ENST00000465274 159 ntBASIC1.22□□□□□ -2.21
RNF40O75150 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC1.22□□□□□ -2.21
RNF40O75150 MIR125B1-201ENST00000385236 88 ntBASIC1.21□□□□□ -2.22
RNF40O75150 RNU4-54P-201ENST00000516428 129 ntBASIC1.21□□□□□ -2.22
RNF40O75150 Y_RNA.698-201ENST00000516798 118 ntBASIC1.21□□□□□ -2.22
RNF40O75150 MIR6767-201ENST00000637302 66 ntBASIC1.21□□□□□ -2.22
RNF40O75150 MIR518A1-201ENST00000385068 85 ntBASIC1.19□□□□□ -2.22
RNF40O75150 OR2A41P-201ENST00000473586 105 ntBASIC1.19□□□□□ -2.22
RNF40O75150 AC087343.1-201ENST00000477341 475 ntBASIC1.19□□□□□ -2.22
RNF40O75150 MIR4295-201ENST00000585286 85 ntBASIC1.19□□□□□ -2.22
RNF40O75150 AC022709.1-201ENST00000615967 87 ntBASIC1.19□□□□□ -2.22
RNF40O75150 MIR4661-201ENST00000582720 75 ntBASIC1.18□□□□□ -2.22
RNF40O75150 MIR3925-201ENST00000584674 77 ntBASIC1.17□□□□□ -2.22
RNF40O75150 AC084368.1-201ENST00000620935 65 ntBASIC1.17□□□□□ -2.22
RNF40O75150 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
RNF40O75150 Y_RNA.540-201ENST00000384638 111 ntBASIC1.16□□□□□ -2.22
RNF40O75150 MIR106A-201ENST00000384870 81 ntBASIC1.16□□□□□ -2.22
RNF40O75150 RNU6-1250P-201ENST00000391218 107 ntBASIC1.16□□□□□ -2.22
RNF40O75150 MIR151B-201ENST00000584249 96 ntBASIC1.16□□□□□ -2.22
RNF40O75150 MIR6788-201ENST00000618842 66 ntBASIC1.16□□□□□ -2.22
RNF40O75150 MIR6515-201ENST00000619843 57 ntBASIC1.16□□□□□ -2.22
RNF40O75150 MIR608-201ENST00000384820 100 ntBASIC1.15□□□□□ -2.23
RNF40O75150 RNU6-1262P-201ENST00000516217 96 ntBASIC1.15□□□□□ -2.23
RNF40O75150 MIR548AL-201ENST00000578416 97 ntBASIC1.15□□□□□ -2.23
RNF40O75150 RNU6-986P-201ENST00000363133 102 ntBASIC1.14□□□□□ -2.23
RNF40O75150 MIR760-201ENST00000390220 80 ntBASIC1.14□□□□□ -2.23
RNF40O75150 MIR548J-201ENST00000408833 112 ntBASIC1.14□□□□□ -2.23
RNF40O75150 SNORD71-201ENST00000411292 86 ntBASIC1.14□□□□□ -2.23
RNF40O75150 RNU6-1223P-201ENST00000517124 104 ntBASIC1.14□□□□□ -2.23
RNF40O75150 AC103810.9-201ENST00000606688 112 ntBASIC1.14□□□□□ -2.23
RNF40O75150 AC098934.3-201ENST00000430450 190 ntBASIC1.13□□□□□ -2.23
RNF40O75150 AL451105.1-201ENST00000450005 189 ntBASIC1.13□□□□□ -2.23
RNF40O75150 RNA5SP480-201ENST00000516840 109 ntBASIC1.13□□□□□ -2.23
RNF40O75150 AC108676.2-201ENST00000605225 163 ntBASIC1.13□□□□□ -2.23
RNF40O75150 RNA5SP128-201ENST00000365305 116 ntBASIC1.12□□□□□ -2.23
RNF40O75150 RNU6-696P-201ENST00000390834 107 ntBASIC1.12□□□□□ -2.23
RNF40O75150 MIR4464-201ENST00000580818 92 ntBASIC1.12□□□□□ -2.23
RNF40O75150 RNU6-828P-201ENST00000364876 107 ntBASIC1.11□□□□□ -2.23
RNF40O75150 MIR548AA1-201ENST00000384971 97 ntBASIC1.11□□□□□ -2.23
RNF40O75150 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.11□□□□□ -2.23
RNF40O75150 MIR4432-201ENST00000581823 84 ntBASIC1.11□□□□□ -2.23
RNF40O75150 AL590095.2-201ENST00000604136 117 ntBASIC1.11□□□□□ -2.23
RNF40O75150 SNORD57-201ENST00000448188 72 ntBASIC1.1□□□□□ -2.23
RNF40O75150 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC1.1□□□□□ -2.23
RNF40O75150 MIR329-2-201ENST00000385029 84 ntBASIC1.09□□□□□ -2.23
RNF40O75150 RNU6-1267P-201ENST00000410747 107 ntBASIC1.09□□□□□ -2.23
RNF40O75150 PVT1_3.1-201ENST00000620853 95 ntBASIC1.09□□□□□ -2.23
RNF40O75150 MTRNR2L9-201ENST00000622562 75 ntBASIC1.08□□□□□ -2.24
RNF40O75150 AP000676.1-201ENST00000533307 52 ntBASIC1.07□□□□□ -2.24
RNF40O75150 MIR6888-201ENST00000621977 67 ntBASIC1.07□□□□□ -2.24
RNF40O75150 Y_RNA.139-201ENST00000363464 102 ntBASIC1.06□□□□□ -2.24
RNF40O75150 RNU6-110P-201ENST00000384508 104 ntBASIC1.06□□□□□ -2.24
RNF40O75150 MIR598-201ENST00000384868 97 ntBASIC1.06□□□□□ -2.24
RNF40O75150 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC1.06□□□□□ -2.24
RNF40O75150 SNORD114-21-201ENST00000606412 72 ntBASIC1.06□□□□□ -2.24
RNF40O75150 RNU6-995P-201ENST00000391244 107 ntBASIC1.05□□□□□ -2.24
RNF40O75150 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC1.05□□□□□ -2.24
RNF40O75150 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC1.05□□□□□ -2.24
RNF40O75150 MIR373-201ENST00000362273 69 ntBASIC1.04□□□□□ -2.24
RNF40O75150 U7.5-201ENST00000517224 61 ntBASIC1.04□□□□□ -2.24
RNF40O75150 AC211469.2-201ENST00000605461 205 ntBASIC1.04□□□□□ -2.24
RNF40O75150 MIR499B-201ENST00000636498 73 ntBASIC1.04□□□□□ -2.24
RNF40O75150 AL445584.3-201ENST00000617173 78 ntBASIC1.03□□□□□ -2.24
RNF40O75150 SNORD114-26-201ENST00000363543 72 ntBASIC1.02□□□□□ -2.25
RNF40O75150 RNU4-38P-201ENST00000364472 129 ntBASIC1.02□□□□□ -2.25
RNF40O75150 RNU6-863P-201ENST00000515989 104 ntBASIC1.02□□□□□ -2.25
RNF40O75150 SCARNA11.2-201ENST00000517183 154 ntBASIC1.02□□□□□ -2.25
RNF40O75150 RNU6-1174P-201ENST00000517278 101 ntBASIC1.02□□□□□ -2.25
RNF40O75150 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC1.02□□□□□ -2.25
RNF40O75150 RNA5SP436-201ENST00000516020 115 ntBASIC1.01□□□□□ -2.25
RNF40O75150 RNU7-55P-201ENST00000459426 62 ntBASIC1□□□□□ -2.25
RNF40O75150 MIR3973-201ENST00000579824 107 ntBASIC1□□□□□ -2.25
RNF40O75150 MIR6779-201ENST00000617283 64 ntBASIC1□□□□□ -2.25
RNF40O75150 RNA5SP98-201ENST00000363158 137 ntBASIC0.99□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 240.9 ms