Protein–RNA interactions for Protein: O43364

HOXA2, Homeobox protein Hox-A2, humanhuman

Predictions only

Length 376 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2O43364 RPL39P28-201ENST00000465655 155 ntBASIC1.05□□□□□ -2.24
HOXA2O43364 RNU6-1232P-201ENST00000516299 86 ntBASIC1.05□□□□□ -2.24
HOXA2O43364 PVT1_3.1-201ENST00000620853 95 ntBASIC1.05□□□□□ -2.24
HOXA2O43364 RNA5SP325-201ENST00000363756 130 ntBASIC1.04□□□□□ -2.24
HOXA2O43364 RNU6-936P-201ENST00000384005 107 ntBASIC1.04□□□□□ -2.24
HOXA2O43364 SNORD116-16-201ENST00000384533 92 ntBASIC1.04□□□□□ -2.24
HOXA2O43364 RNU7-154P-201ENST00000516194 62 ntBASIC1.04□□□□□ -2.24
HOXA2O43364 MIR6755-201ENST00000619993 66 ntBASIC1.04□□□□□ -2.24
HOXA2O43364 MIR373-201ENST00000362273 69 ntBASIC1.03□□□□□ -2.24
HOXA2O43364 SNORA49-201ENST00000386157 136 ntBASIC1.03□□□□□ -2.24
HOXA2O43364 AC098934.3-201ENST00000430450 190 ntBASIC1.03□□□□□ -2.24
HOXA2O43364 RNA5SP470-201ENST00000516463 106 ntBASIC1.03□□□□□ -2.24
HOXA2O43364 MIR548AD-201ENST00000584780 82 ntBASIC1.03□□□□□ -2.24
HOXA2O43364 MIR4653-201ENST00000585107 83 ntBASIC1.03□□□□□ -2.24
HOXA2O43364 RNU6-337P-201ENST00000391243 106 ntBASIC1.02□□□□□ -2.25
HOXA2O43364 RNU6-175P-201ENST00000516896 107 ntBASIC1.02□□□□□ -2.25
HOXA2O43364 RNU6-1312P-201ENST00000362425 108 ntBASIC1.01□□□□□ -2.25
HOXA2O43364 RNU6-1036P-201ENST00000383959 104 ntBASIC1.01□□□□□ -2.25
HOXA2O43364 RNU6-231P-201ENST00000517122 103 ntBASIC1.01□□□□□ -2.25
HOXA2O43364 SNORD115-25-201ENST00000362619 82 ntBASIC1□□□□□ -2.25
HOXA2O43364 RNU6-863P-201ENST00000515989 104 ntBASIC1□□□□□ -2.25
HOXA2O43364 Y_RNA.282-201ENST00000364793 102 ntBASIC0.99□□□□□ -2.25
HOXA2O43364 RNA5SP128-201ENST00000365305 116 ntBASIC0.99□□□□□ -2.25
HOXA2O43364 MIRLET7B-201ENST00000385140 83 ntBASIC0.99□□□□□ -2.25
HOXA2O43364 CYP3A137P-201ENST00000562436 69 ntBASIC0.99□□□□□ -2.25
HOXA2O43364 MIR5000-201ENST00000577717 103 ntBASIC0.99□□□□□ -2.25
HOXA2O43364 MIR429-201ENST00000362106 83 ntBASIC0.98□□□□□ -2.25
HOXA2O43364 RNU6-1184P-201ENST00000384588 108 ntBASIC0.98□□□□□ -2.25
HOXA2O43364 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.98□□□□□ -2.25
HOXA2O43364 RNU7-129P-201ENST00000516128 62 ntBASIC0.98□□□□□ -2.25
HOXA2O43364 MIR3973-201ENST00000579824 107 ntBASIC0.98□□□□□ -2.25
HOXA2O43364 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.95□□□□□ -2.26
HOXA2O43364 RNU6-502P-201ENST00000362419 108 ntBASIC0.95□□□□□ -2.26
HOXA2O43364 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.95□□□□□ -2.26
HOXA2O43364 RNU6-782P-201ENST00000516852 104 ntBASIC0.95□□□□□ -2.26
HOXA2O43364 MIR876-201ENST00000401147 81 ntBASIC0.94□□□□□ -2.26
HOXA2O43364 RNU6-246P-201ENST00000384702 107 ntBASIC0.93□□□□□ -2.26
HOXA2O43364 SNORD116.2-201ENST00000391251 93 ntBASIC0.93□□□□□ -2.26
HOXA2O43364 AC103810.9-201ENST00000606688 112 ntBASIC0.93□□□□□ -2.26
HOXA2O43364 RN7SL660P-201ENST00000614852 299 ntBASIC0.93□□□□□ -2.26
HOXA2O43364 Y_RNA.374-201ENST00000365606 101 ntBASIC0.92□□□□□ -2.26
HOXA2O43364 MIR4698-201ENST00000577795 80 ntBASIC0.92□□□□□ -2.26
HOXA2O43364 RN7SL793P-201ENST00000583259 296 ntBASIC0.92□□□□□ -2.26
HOXA2O43364 MIR7110-201ENST00000612638 86 ntBASIC0.92□□□□□ -2.26
HOXA2O43364 MIR499B-201ENST00000636498 73 ntBASIC0.92□□□□□ -2.26
HOXA2O43364 RNU6-945P-201ENST00000383947 107 ntBASIC0.91□□□□□ -2.26
HOXA2O43364 MIR3925-201ENST00000584674 77 ntBASIC0.9□□□□□ -2.27
HOXA2O43364 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC0.9□□□□□ -2.27
HOXA2O43364 SNORD114-2-201ENST00000363953 78 ntBASIC0.87□□□□□ -2.27
HOXA2O43364 SCARNA11.2-201ENST00000517183 154 ntBASIC0.87□□□□□ -2.27
HOXA2O43364 SNORD44.1-201ENST00000363202 61 ntBASIC0.86□□□□□ -2.27
HOXA2O43364 Y_RNA.379-201ENST00000365653 102 ntBASIC0.86□□□□□ -2.27
HOXA2O43364 MIR106A-201ENST00000384870 81 ntBASIC0.86□□□□□ -2.27
HOXA2O43364 MIR216A-201ENST00000385063 110 ntBASIC0.86□□□□□ -2.27
HOXA2O43364 AP000676.1-201ENST00000533307 52 ntBASIC0.86□□□□□ -2.27
HOXA2O43364 MIR548AG1-201ENST00000579932 66 ntBASIC0.86□□□□□ -2.27
HOXA2O43364 RNU6-458P-201ENST00000384179 107 ntBASIC0.85□□□□□ -2.27
HOXA2O43364 MIR146A-201ENST00000385201 99 ntBASIC0.85□□□□□ -2.27
HOXA2O43364 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC0.85□□□□□ -2.27
HOXA2O43364 RNU6-351P-201ENST00000516097 100 ntBASIC0.85□□□□□ -2.27
HOXA2O43364 U6.58-201ENST00000613107 107 ntBASIC0.85□□□□□ -2.27
HOXA2O43364 MIR6866-201ENST00000638146 69 ntBASIC0.85□□□□□ -2.27
HOXA2O43364 SNORD1B-201ENST00000363091 84 ntBASIC0.84□□□□□ -2.27
HOXA2O43364 Y_RNA.109-201ENST00000363215 102 ntBASIC0.84□□□□□ -2.27
HOXA2O43364 MIR4714-201ENST00000580728 77 ntBASIC0.84□□□□□ -2.27
HOXA2O43364 AL353803.5-201ENST00000599815 141 ntBASIC0.84□□□□□ -2.27
HOXA2O43364 MIR6835-201ENST00000621552 64 ntBASIC0.84□□□□□ -2.27
HOXA2O43364 RNU6-172P-201ENST00000411000 93 ntBASIC0.83□□□□□ -2.28
HOXA2O43364 SNORA40.16-201ENST00000517238 121 ntBASIC0.83□□□□□ -2.28
HOXA2O43364 snoR1.1-201ENST00000628177 80 ntBASIC0.83□□□□□ -2.28
HOXA2O43364 RNA5SP98-201ENST00000363158 137 ntBASIC0.82□□□□□ -2.28
HOXA2O43364 RNA5SP457-201ENST00000363657 124 ntBASIC0.82□□□□□ -2.28
HOXA2O43364 RNA5SP436-201ENST00000516020 115 ntBASIC0.82□□□□□ -2.28
HOXA2O43364 SNORA40B-201ENST00000385573 128 ntBASIC0.81□□□□□ -2.28
HOXA2O43364 RNA5SP121-201ENST00000516537 101 ntBASIC0.8□□□□□ -2.28
HOXA2O43364 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC0.8□□□□□ -2.28
HOXA2O43364 uc_338.17-201ENST00000619633 179 ntBASIC0.8□□□□□ -2.28
HOXA2O43364 SNORD115-23-201ENST00000364461 82 ntBASIC0.79□□□□□ -2.28
HOXA2O43364 MIR508-201ENST00000384857 115 ntBASIC0.79□□□□□ -2.28
HOXA2O43364 MIR193B-201ENST00000384907 83 ntBASIC0.79□□□□□ -2.28
HOXA2O43364 AC108740.1-201ENST00000498629 225 ntBASIC0.79□□□□□ -2.28
HOXA2O43364 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC0.79□□□□□ -2.28
HOXA2O43364 MIR6513-201ENST00000621188 64 ntBASIC0.79□□□□□ -2.28
HOXA2O43364 Y_RNA.178-201ENST00000363832 102 ntBASIC0.78□□□□□ -2.28
HOXA2O43364 SNORA68.3-201ENST00000515906 83 ntBASIC0.78□□□□□ -2.28
HOXA2O43364 MIR1273G-201ENST00000577677 100 ntBASIC0.78□□□□□ -2.28
HOXA2O43364 RNU6-810P-201ENST00000364001 107 ntBASIC0.77□□□□□ -2.29
HOXA2O43364 MIR103A1-201ENST00000362165 78 ntBASIC0.76□□□□□ -2.29
HOXA2O43364 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.76□□□□□ -2.29
HOXA2O43364 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.76□□□□□ -2.29
HOXA2O43364 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.76□□□□□ -2.29
HOXA2O43364 RNU6-127P-201ENST00000390897 107 ntBASIC0.75□□□□□ -2.29
HOXA2O43364 MIR4432-201ENST00000581823 84 ntBASIC0.75□□□□□ -2.29
HOXA2O43364 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.75□□□□□ -2.29
HOXA2O43364 MIRLET7D-201ENST00000362263 87 ntBASIC0.73□□□□□ -2.29
HOXA2O43364 Y_RNA.30-201ENST00000362572 97 ntBASIC0.73□□□□□ -2.29
HOXA2O43364 Y_RNA.68-201ENST00000362881 102 ntBASIC0.73□□□□□ -2.29
HOXA2O43364 RNU6-753P-201ENST00000363926 107 ntBASIC0.73□□□□□ -2.29
HOXA2O43364 AC108676.2-201ENST00000605225 163 ntBASIC0.73□□□□□ -2.29
HOXA2O43364 MIR924-201ENST00000638017 53 ntBASIC0.73□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 98.4 ms