Protein–RNA interactions for Protein: O15347

HMGB3, High mobility group protein B3, humanhuman

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3O15347 AL035470.1-201ENST00000622571 220 ntBASIC-3.1□□□□□ -2.91
HMGB3O15347 SNORD58C-201ENST00000365223 64 ntBASIC-3.11□□□□□ -2.91
HMGB3O15347 Y_RNA.74-201ENST00000362911 99 ntBASIC-3.12□□□□□ -2.91
HMGB3O15347 MIR3144-201ENST00000579460 79 ntBASIC-3.12□□□□□ -2.91
HMGB3O15347 MIR3171-201ENST00000584270 74 ntBASIC-3.12□□□□□ -2.91
HMGB3O15347 Y_RNA.781-201ENST00000620301 103 ntBASIC-3.12□□□□□ -2.91
HMGB3O15347 RNU6-340P-201ENST00000364005 107 ntBASIC-3.13□□□□□ -2.91
HMGB3O15347 Y_RNA.204-201ENST00000364112 102 ntBASIC-3.13□□□□□ -2.91
HMGB3O15347 AC022559.1-201ENST00000520905 205 ntBASIC-3.13□□□□□ -2.91
HMGB3O15347 RNU6-681P-201ENST00000364012 104 ntBASIC-3.14□□□□□ -2.91
HMGB3O15347 SNORD58A-201ENST00000383875 65 ntBASIC-3.14□□□□□ -2.91
HMGB3O15347 RNU6-639P-201ENST00000384074 107 ntBASIC-3.14□□□□□ -2.91
HMGB3O15347 Y_RNA.29-201ENST00000362570 113 ntBASIC-3.15□□□□□ -2.91
HMGB3O15347 RNU6-1283P-201ENST00000365314 105 ntBASIC-3.15□□□□□ -2.91
HMGB3O15347 Y_RNA.574-201ENST00000384766 95 ntBASIC-3.15□□□□□ -2.91
HMGB3O15347 AL450471.1-201ENST00000447509 127 ntBASIC-3.15□□□□□ -2.91
HMGB3O15347 AC141273.2-201ENST00000618989 130 ntBASIC-3.15□□□□□ -2.91
HMGB3O15347 MIR429-201ENST00000362106 83 ntBASIC-3.16□□□□□ -2.92
HMGB3O15347 Y_RNA.202-201ENST00000364083 110 ntBASIC-3.16□□□□□ -2.92
HMGB3O15347 AL035461.1-201ENST00000421490 332 ntBASIC-3.16□□□□□ -2.92
HMGB3O15347 MTND5P20-201ENST00000448677 143 ntBASIC-3.16□□□□□ -2.92
HMGB3O15347 U7.2-201ENST00000607576 63 ntBASIC-3.16□□□□□ -2.92
HMGB3O15347 Y_RNA.138-201ENST00000363462 102 ntBASIC-3.17□□□□□ -2.92
HMGB3O15347 Y_RNA.501-201ENST00000384467 103 ntBASIC-3.17□□□□□ -2.92
HMGB3O15347 MIR513C-201ENST00000401352 84 ntBASIC-3.17□□□□□ -2.92
HMGB3O15347 MIR5009-201ENST00000578736 100 ntBASIC-3.17□□□□□ -2.92
HMGB3O15347 Y_RNA.186-201ENST00000363899 92 ntBASIC-3.18□□□□□ -2.92
HMGB3O15347 RNU6-645P-201ENST00000364649 106 ntBASIC-3.18□□□□□ -2.92
HMGB3O15347 Y_RNA.282-201ENST00000364793 102 ntBASIC-3.18□□□□□ -2.92
HMGB3O15347 Y_RNA.478-201ENST00000384358 107 ntBASIC-3.18□□□□□ -2.92
HMGB3O15347 RNU7-174P-201ENST00000516248 59 ntBASIC-3.18□□□□□ -2.92
HMGB3O15347 AC020661.2-201ENST00000560114 134 ntBASIC-3.18□□□□□ -2.92
HMGB3O15347 AC012531.4-201ENST00000616509 177 ntBASIC-3.18□□□□□ -2.92
HMGB3O15347 RNU6-230P-201ENST00000362457 104 ntBASIC-3.19□□□□□ -2.92
HMGB3O15347 Y_RNA.109-201ENST00000363215 102 ntBASIC-3.19□□□□□ -2.92
HMGB3O15347 Y_RNA.200-201ENST00000364018 102 ntBASIC-3.19□□□□□ -2.92
HMGB3O15347 Y_RNA.443-201ENST00000384135 111 ntBASIC-3.19□□□□□ -2.92
HMGB3O15347 MIR1236-201ENST00000408340 102 ntBASIC-3.19□□□□□ -2.92
HMGB3O15347 MTATP8P1-201ENST00000467115 207 ntBASIC-3.19□□□□□ -2.92
HMGB3O15347 RNU6-795P-201ENST00000516323 103 ntBASIC-3.19□□□□□ -2.92
HMGB3O15347 RNY4-201ENST00000516507 96 ntBASIC-3.19□□□□□ -2.92
HMGB3O15347 AC072026.1-201ENST00000605023 201 ntBASIC-3.19□□□□□ -2.92
HMGB3O15347 Y_RNA.778-201ENST00000620203 90 ntBASIC-3.19□□□□□ -2.92
HMGB3O15347 RNU6-598P-201ENST00000364017 105 ntBASIC-3.2□□□□□ -2.92
HMGB3O15347 Y_RNA.272-201ENST00000364696 102 ntBASIC-3.2□□□□□ -2.92
HMGB3O15347 MIR548C-201ENST00000384815 97 ntBASIC-3.2□□□□□ -2.92
HMGB3O15347 RNU6-972P-201ENST00000391208 107 ntBASIC-3.2□□□□□ -2.92
HMGB3O15347 RNU6-1061P-201ENST00000516530 99 ntBASIC-3.2□□□□□ -2.92
HMGB3O15347 Y_RNA.702-201ENST00000516843 96 ntBASIC-3.2□□□□□ -2.92
HMGB3O15347 Y_RNA.240-201ENST00000364469 95 ntBASIC-3.21□□□□□ -2.92
HMGB3O15347 RNU6-861P-201ENST00000516745 106 ntBASIC-3.21□□□□□ -2.92
HMGB3O15347 Y_RNA.705-201ENST00000516862 110 ntBASIC-3.21□□□□□ -2.92
HMGB3O15347 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-3.21□□□□□ -2.92
HMGB3O15347 RNU6-587P-201ENST00000391282 106 ntBASIC-3.22□□□□□ -2.92
HMGB3O15347 Y_RNA.420-201ENST00000384043 110 ntBASIC-3.23□□□□□ -2.93
HMGB3O15347 RNU6-887P-201ENST00000410660 100 ntBASIC-3.24□□□□□ -2.93
HMGB3O15347 RNU6-1267P-201ENST00000410747 107 ntBASIC-3.24□□□□□ -2.93
HMGB3O15347 SNORD19B.1-201ENST00000630615 80 ntBASIC-3.24□□□□□ -2.93
HMGB3O15347 Y_RNA.325-201ENST00000365171 122 ntBASIC-3.25□□□□□ -2.93
HMGB3O15347 RNY3P14-201ENST00000384309 102 ntBASIC-3.25□□□□□ -2.93
HMGB3O15347 RNU6-1111P-201ENST00000391118 107 ntBASIC-3.25□□□□□ -2.93
HMGB3O15347 RNY4P9-201ENST00000363194 97 ntBASIC-3.26□□□□□ -2.93
HMGB3O15347 Y_RNA.397-201ENST00000383950 98 ntBASIC-3.26□□□□□ -2.93
HMGB3O15347 RNU6-1227P-201ENST00000383981 107 ntBASIC-3.26□□□□□ -2.93
HMGB3O15347 Y_RNA.509-201ENST00000384506 99 ntBASIC-3.26□□□□□ -2.93
HMGB3O15347 Y_RNA.630-201ENST00000411370 108 ntBASIC-3.26□□□□□ -2.93
HMGB3O15347 MIR3170-201ENST00000582699 77 ntBASIC-3.26□□□□□ -2.93
HMGB3O15347 FTX_4.1-201ENST00000616291 147 ntBASIC-3.26□□□□□ -2.93
HMGB3O15347 RNU4-40P-201ENST00000364351 143 ntBASIC-3.27□□□□□ -2.93
HMGB3O15347 Y_RNA.460-201ENST00000384255 102 ntBASIC-3.27□□□□□ -2.93
HMGB3O15347 TRAJ33-201ENST00000390504 57 ntAPPRIS P1 BASIC-3.27□□□□□ -2.93
HMGB3O15347 Y_RNA.619-201ENST00000410951 90 ntBASIC-3.27□□□□□ -2.93
HMGB3O15347 RNU6-766P-201ENST00000362478 107 ntBASIC-3.28□□□□□ -2.93
HMGB3O15347 RNU6-111P-201ENST00000517179 105 ntBASIC-3.28□□□□□ -2.93
HMGB3O15347 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC-3.28□□□□□ -2.93
HMGB3O15347 Y_RNA.11-201ENST00000362375 109 ntBASIC-3.29□□□□□ -2.94
HMGB3O15347 SNORD116-10-201ENST00000363791 102 ntBASIC-3.29□□□□□ -2.94
HMGB3O15347 MIR548F4-201ENST00000408515 105 ntBASIC-3.29□□□□□ -2.94
HMGB3O15347 Y_RNA.609-201ENST00000410669 89 ntBASIC-3.29□□□□□ -2.94
HMGB3O15347 Y_RNA.513-201ENST00000384522 100 ntBASIC-3.3□□□□□ -2.94
HMGB3O15347 SNORD77.2-201ENST00000391045 68 ntBASIC-3.3□□□□□ -2.94
HMGB3O15347 RNU7-153P-201ENST00000516455 62 ntBASIC-3.3□□□□□ -2.94
HMGB3O15347 RNU6-537P-201ENST00000517277 103 ntBASIC-3.3□□□□□ -2.94
HMGB3O15347 MIR548X2-201ENST00000579776 100 ntBASIC-3.3□□□□□ -2.94
HMGB3O15347 MIR548W-201ENST00000581970 74 ntBASIC-3.3□□□□□ -2.94
HMGB3O15347 U2.18-201ENST00000622185 84 ntBASIC-3.3□□□□□ -2.94
HMGB3O15347 RNU6-1079P-201ENST00000362861 110 ntBASIC-3.31□□□□□ -2.94
HMGB3O15347 Y_RNA.96-201ENST00000363092 109 ntBASIC-3.31□□□□□ -2.94
HMGB3O15347 RNU6-682P-201ENST00000363843 106 ntBASIC-3.31□□□□□ -2.94
HMGB3O15347 SNORD115-31-201ENST00000365318 82 ntBASIC-3.31□□□□□ -2.94
HMGB3O15347 Y_RNA.350-201ENST00000365409 98 ntBASIC-3.31□□□□□ -2.94
HMGB3O15347 snoU13.10-201ENST00000459301 103 ntBASIC-3.31□□□□□ -2.94
HMGB3O15347 RNU6-1089P-201ENST00000516473 104 ntBASIC-3.31□□□□□ -2.94
HMGB3O15347 MIR3128-201ENST00000581957 66 ntBASIC-3.31□□□□□ -2.94
HMGB3O15347 RNU6-698P-201ENST00000363523 107 ntBASIC-3.33□□□□□ -2.94
HMGB3O15347 RNU6-34P-201ENST00000364874 107 ntBASIC-3.33□□□□□ -2.94
HMGB3O15347 Y_RNA.459-201ENST00000384251 102 ntBASIC-3.33□□□□□ -2.94
HMGB3O15347 MIR548AA1-201ENST00000384971 97 ntBASIC-3.33□□□□□ -2.94
HMGB3O15347 Y_RNA.580-201ENST00000391004 95 ntBASIC-3.33□□□□□ -2.94
HMGB3O15347 Y_RNA.699-201ENST00000516803 93 ntBASIC-3.33□□□□□ -2.94
Retrieved 100 of 98,524 protein–RNA pairs in 190.8 ms