Protein–RNA interactions for Protein: O15269

SPTLC1, Serine palmitoyltransferase 1, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1O15269 RNU4-33P-201ENST00000364316 85 ntBASIC1.18□□□□□ -2.22
SPTLC1O15269 MIR216A-201ENST00000385063 110 ntBASIC1.18□□□□□ -2.22
SPTLC1O15269 SNORA49-201ENST00000386157 136 ntBASIC1.18□□□□□ -2.22
SPTLC1O15269 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.17□□□□□ -2.22
SPTLC1O15269 SNORD115-25-201ENST00000362619 82 ntBASIC1.17□□□□□ -2.22
SPTLC1O15269 Y_RNA.109-201ENST00000363215 102 ntBASIC1.17□□□□□ -2.22
SPTLC1O15269 SNORD114-29-201ENST00000364819 70 ntBASIC1.17□□□□□ -2.22
SPTLC1O15269 SNORA2A-201ENST00000383885 135 ntBASIC1.17□□□□□ -2.22
SPTLC1O15269 Y_RNA.423-201ENST00000384057 113 ntBASIC1.17□□□□□ -2.22
SPTLC1O15269 RNU6-110P-201ENST00000384508 104 ntBASIC1.17□□□□□ -2.22
SPTLC1O15269 RNU6-35P-201ENST00000384530 107 ntBASIC1.17□□□□□ -2.22
SPTLC1O15269 RNU6-229P-201ENST00000516614 102 ntBASIC1.17□□□□□ -2.22
SPTLC1O15269 AC211469.2-201ENST00000605461 205 ntBASIC1.17□□□□□ -2.22
SPTLC1O15269 SNORD118-201ENST00000363593 134 ntBASIC1.16□□□□□ -2.22
SPTLC1O15269 RNU6-246P-201ENST00000384702 107 ntBASIC1.16□□□□□ -2.22
SPTLC1O15269 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC1.16□□□□□ -2.22
SPTLC1O15269 MIR1285-1-201ENST00000408593 84 ntBASIC1.15□□□□□ -2.23
SPTLC1O15269 RNU6-172P-201ENST00000411000 93 ntBASIC1.15□□□□□ -2.23
SPTLC1O15269 RNA5SP436-201ENST00000516020 115 ntBASIC1.15□□□□□ -2.23
SPTLC1O15269 RNU6-175P-201ENST00000516896 107 ntBASIC1.15□□□□□ -2.23
SPTLC1O15269 SNORD114-21-201ENST00000606412 72 ntBASIC1.15□□□□□ -2.23
SPTLC1O15269 SNORD1B-201ENST00000363091 84 ntBASIC1.14□□□□□ -2.23
SPTLC1O15269 SNORD2-201ENST00000459163 69 ntBASIC1.14□□□□□ -2.23
SPTLC1O15269 SNORA40B-201ENST00000385573 128 ntBASIC1.13□□□□□ -2.23
SPTLC1O15269 RNU7-154P-201ENST00000516194 62 ntBASIC1.12□□□□□ -2.23
SPTLC1O15269 RNU4-54P-201ENST00000516428 129 ntBASIC1.12□□□□□ -2.23
SPTLC1O15269 MIR548X-201ENST00000580069 75 ntBASIC1.12□□□□□ -2.23
SPTLC1O15269 AL590095.2-201ENST00000604136 117 ntBASIC1.12□□□□□ -2.23
SPTLC1O15269 RNU6-1036P-201ENST00000383959 104 ntBASIC1.11□□□□□ -2.23
SPTLC1O15269 DLEU2_4.2-201ENST00000616613 58 ntBASIC1.11□□□□□ -2.23
SPTLC1O15269 Y_RNA.30-201ENST00000362572 97 ntBASIC1.1□□□□□ -2.23
SPTLC1O15269 RNA5SP470-201ENST00000516463 106 ntBASIC1.1□□□□□ -2.23
SPTLC1O15269 RNU6-782P-201ENST00000516852 104 ntBASIC1.1□□□□□ -2.23
SPTLC1O15269 CYP3A137P-201ENST00000562436 69 ntBASIC1.1□□□□□ -2.23
SPTLC1O15269 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC1.1□□□□□ -2.23
SPTLC1O15269 RNU6-502P-201ENST00000362419 108 ntBASIC1.09□□□□□ -2.23
SPTLC1O15269 Y_RNA.178-201ENST00000363832 102 ntBASIC1.09□□□□□ -2.23
SPTLC1O15269 MIR518A1-201ENST00000385068 85 ntBASIC1.09□□□□□ -2.23
SPTLC1O15269 MIRLET7B-201ENST00000385140 83 ntBASIC1.09□□□□□ -2.23
SPTLC1O15269 RNU6-930P-201ENST00000390938 100 ntBASIC1.09□□□□□ -2.23
SPTLC1O15269 MIR4677-201ENST00000584153 80 ntBASIC1.09□□□□□ -2.23
SPTLC1O15269 MIR6857-201ENST00000613267 93 ntBASIC1.09□□□□□ -2.23
SPTLC1O15269 AC084368.1-201ENST00000620935 65 ntBASIC1.09□□□□□ -2.23
SPTLC1O15269 MIR373-201ENST00000362273 69 ntBASIC1.08□□□□□ -2.24
SPTLC1O15269 RNU4-38P-201ENST00000364472 129 ntBASIC1.08□□□□□ -2.24
SPTLC1O15269 RNU6-458P-201ENST00000384179 107 ntBASIC1.08□□□□□ -2.24
SPTLC1O15269 MIR193B-201ENST00000384907 83 ntBASIC1.08□□□□□ -2.24
SPTLC1O15269 PSMC1P5-201ENST00000512850 177 ntBASIC1.08□□□□□ -2.24
SPTLC1O15269 MIR4490-201ENST00000582647 84 ntBASIC1.08□□□□□ -2.24
SPTLC1O15269 U6.58-201ENST00000613107 107 ntBASIC1.08□□□□□ -2.24
SPTLC1O15269 RNA5SP457-201ENST00000363657 124 ntBASIC1.07□□□□□ -2.24
SPTLC1O15269 MIR501-201ENST00000390204 84 ntBASIC1.07□□□□□ -2.24
SPTLC1O15269 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC1.07□□□□□ -2.24
SPTLC1O15269 MIR6755-201ENST00000619993 66 ntBASIC1.07□□□□□ -2.24
SPTLC1O15269 RNU6-848P-201ENST00000515948 107 ntBASIC1.06□□□□□ -2.24
SPTLC1O15269 RNU6-617P-201ENST00000516147 107 ntBASIC1.06□□□□□ -2.24
SPTLC1O15269 RNU6-473P-201ENST00000516164 107 ntBASIC1.06□□□□□ -2.24
SPTLC1O15269 RNU6-1049P-201ENST00000516414 107 ntBASIC1.06□□□□□ -2.24
SPTLC1O15269 RN7SL660P-201ENST00000614852 299 ntBASIC1.06□□□□□ -2.24
SPTLC1O15269 MIR579-201ENST00000385221 98 ntBASIC1.05□□□□□ -2.24
SPTLC1O15269 MIR1273G-201ENST00000577677 100 ntBASIC1.05□□□□□ -2.24
SPTLC1O15269 MIR532-201ENST00000385025 91 ntBASIC1.04□□□□□ -2.24
SPTLC1O15269 MIR3973-201ENST00000579824 107 ntBASIC1.04□□□□□ -2.24
SPTLC1O15269 MIR429-201ENST00000362106 83 ntBASIC1.03□□□□□ -2.24
SPTLC1O15269 MIR760-201ENST00000390220 80 ntBASIC1.03□□□□□ -2.24
SPTLC1O15269 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC1.02□□□□□ -2.25
SPTLC1O15269 RNU6-598P-201ENST00000364017 105 ntBASIC1.02□□□□□ -2.25
SPTLC1O15269 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC1.02□□□□□ -2.25
SPTLC1O15269 AC098934.3-201ENST00000430450 190 ntBASIC1.01□□□□□ -2.25
SPTLC1O15269 MIR4698-201ENST00000577795 80 ntBASIC1.01□□□□□ -2.25
SPTLC1O15269 AL353803.5-201ENST00000599815 141 ntBASIC1.01□□□□□ -2.25
SPTLC1O15269 AC103810.9-201ENST00000606688 112 ntBASIC1.01□□□□□ -2.25
SPTLC1O15269 MIR499B-201ENST00000636498 73 ntBASIC1.01□□□□□ -2.25
SPTLC1O15269 MIR548F3-201ENST00000408509 87 ntBASIC1□□□□□ -2.25
SPTLC1O15269 RPL39P28-201ENST00000465655 155 ntBASIC1□□□□□ -2.25
SPTLC1O15269 MIR3925-201ENST00000584674 77 ntBASIC1□□□□□ -2.25
SPTLC1O15269 U2.18-201ENST00000622185 84 ntBASIC1□□□□□ -2.25
SPTLC1O15269 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC1□□□□□ -2.25
SPTLC1O15269 Y_RNA.68-201ENST00000362881 102 ntBASIC0.98□□□□□ -2.25
SPTLC1O15269 RNU6-863P-201ENST00000515989 104 ntBASIC0.98□□□□□ -2.25
SPTLC1O15269 AP000676.1-201ENST00000533307 52 ntBASIC0.98□□□□□ -2.25
SPTLC1O15269 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC0.97□□□□□ -2.25
SPTLC1O15269 RNU7-151P-201ENST00000516930 53 ntBASIC0.97□□□□□ -2.25
SPTLC1O15269 RNU6-419P-201ENST00000517030 63 ntBASIC0.97□□□□□ -2.25
SPTLC1O15269 Y_RNA.115-201ENST00000363272 98 ntBASIC0.96□□□□□ -2.26
SPTLC1O15269 RNA5SP128-201ENST00000365305 116 ntBASIC0.96□□□□□ -2.26
SPTLC1O15269 RNU7-129P-201ENST00000516128 62 ntBASIC0.96□□□□□ -2.26
SPTLC1O15269 MIR6513-201ENST00000621188 64 ntBASIC0.96□□□□□ -2.26
SPTLC1O15269 MIR924-201ENST00000638017 53 ntBASIC0.95□□□□□ -2.26
SPTLC1O15269 MIR4714-201ENST00000580728 77 ntBASIC0.94□□□□□ -2.26
SPTLC1O15269 AC010487.4-201ENST00000637027 61 ntBASIC0.94□□□□□ -2.26
SPTLC1O15269 RNU6-924P-201ENST00000362926 108 ntBASIC0.93□□□□□ -2.26
SPTLC1O15269 RNU6-838P-201ENST00000363399 108 ntBASIC0.93□□□□□ -2.26
SPTLC1O15269 MIR4432-201ENST00000581823 84 ntBASIC0.93□□□□□ -2.26
SPTLC1O15269 SNORD114-23-201ENST00000363536 72 ntBASIC0.92□□□□□ -2.26
SPTLC1O15269 SNORD115-23-201ENST00000364461 82 ntBASIC0.92□□□□□ -2.26
SPTLC1O15269 MIR876-201ENST00000401147 81 ntBASIC0.92□□□□□ -2.26
SPTLC1O15269 SCARNA11.2-201ENST00000517183 154 ntBASIC0.92□□□□□ -2.26
SPTLC1O15269 AC108676.2-201ENST00000605225 163 ntBASIC0.92□□□□□ -2.26
SPTLC1O15269 Y_RNA.69-201ENST00000362885 109 ntBASIC0.91□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 232 ms