Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 RNU6-881P-201ENST00000516813 102 ntBASIC0.18□□□□□ -2.38
FOXN3O00409 AP000676.1-201ENST00000533307 52 ntBASIC0.18□□□□□ -2.38
FOXN3O00409 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.18□□□□□ -2.38
FOXN3O00409 U6.96-201ENST00000636425 70 ntBASIC0.18□□□□□ -2.38
FOXN3O00409 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC0.17□□□□□ -2.38
FOXN3O00409 RNU6-645P-201ENST00000364649 106 ntBASIC0.17□□□□□ -2.38
FOXN3O00409 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.17□□□□□ -2.38
FOXN3O00409 SNORD113.1-201ENST00000363280 73 ntBASIC0.16□□□□□ -2.38
FOXN3O00409 RNA5SP214-201ENST00000363378 118 ntBASIC0.16□□□□□ -2.38
FOXN3O00409 MIR610-201ENST00000385139 96 ntBASIC0.16□□□□□ -2.38
FOXN3O00409 MIR4743-201ENST00000584576 69 ntBASIC0.16□□□□□ -2.38
FOXN3O00409 AC090617.8-201ENST00000623339 167 ntBASIC0.16□□□□□ -2.38
FOXN3O00409 Y_RNA.433-201ENST00000384089 102 ntBASIC0.15□□□□□ -2.39
FOXN3O00409 RNU6-895P-201ENST00000384125 103 ntBASIC0.15□□□□□ -2.39
FOXN3O00409 MIR548C-201ENST00000384815 97 ntBASIC0.15□□□□□ -2.39
FOXN3O00409 MIR145-201ENST00000384967 88 ntBASIC0.15□□□□□ -2.39
FOXN3O00409 RNU6-656P-201ENST00000516785 107 ntBASIC0.15□□□□□ -2.39
FOXN3O00409 MIR8053-201ENST00000613344 75 ntBASIC0.15□□□□□ -2.39
FOXN3O00409 RNU6-1162P-201ENST00000384443 104 ntBASIC0.14□□□□□ -2.39
FOXN3O00409 RNA5SP299-201ENST00000391203 116 ntBASIC0.14□□□□□ -2.39
FOXN3O00409 MIR892B-201ENST00000401279 77 ntBASIC0.14□□□□□ -2.39
FOXN3O00409 Y_RNA.633-201ENST00000459107 95 ntBASIC0.14□□□□□ -2.39
FOXN3O00409 MIR6739-201ENST00000622461 75 ntBASIC0.14□□□□□ -2.39
FOXN3O00409 SNORD114-9-201ENST00000364370 72 ntBASIC0.13□□□□□ -2.39
FOXN3O00409 RNU6-1296P-201ENST00000383879 107 ntBASIC0.13□□□□□ -2.39
FOXN3O00409 SNORD115-25-201ENST00000362619 82 ntBASIC0.12□□□□□ -2.39
FOXN3O00409 MIR521-2-201ENST00000384818 87 ntBASIC0.12□□□□□ -2.39
FOXN3O00409 MIR1295A-201ENST00000408463 79 ntBASIC0.12□□□□□ -2.39
FOXN3O00409 RNU6-634P-201ENST00000459134 106 ntBASIC0.12□□□□□ -2.39
FOXN3O00409 RNA5SP98-201ENST00000363158 137 ntBASIC0.11□□□□□ -2.39
FOXN3O00409 Y_RNA.178-201ENST00000363832 102 ntBASIC0.11□□□□□ -2.39
FOXN3O00409 Y_RNA.250-201ENST00000364542 110 ntBASIC0.11□□□□□ -2.39
FOXN3O00409 RNU6-540P-201ENST00000384622 101 ntBASIC0.11□□□□□ -2.39
FOXN3O00409 MIR6773-201ENST00000612812 74 ntBASIC0.11□□□□□ -2.39
FOXN3O00409 SNORA15B-2-201ENST00000384058 135 ntBASIC0.1□□□□□ -2.39
FOXN3O00409 SNORA15B-1-201ENST00000384334 135 ntBASIC0.1□□□□□ -2.39
FOXN3O00409 RNU6-929P-201ENST00000384429 107 ntBASIC0.1□□□□□ -2.39
FOXN3O00409 RNU6-337P-201ENST00000391243 106 ntBASIC0.1□□□□□ -2.39
FOXN3O00409 RNU7-159P-201ENST00000459284 62 ntBASIC0.1□□□□□ -2.39
FOXN3O00409 RNA5SP285-201ENST00000516619 119 ntBASIC0.1□□□□□ -2.39
FOXN3O00409 MIR5190-201ENST00000581537 80 ntBASIC0.1□□□□□ -2.39
FOXN3O00409 MIR4768-201ENST00000585270 74 ntBASIC0.1□□□□□ -2.39
FOXN3O00409 uc_338.36-201ENST00000622331 158 ntBASIC0.1□□□□□ -2.39
FOXN3O00409 SNORD30.1-201ENST00000391309 70 ntBASIC0.09□□□□□ -2.4
FOXN3O00409 MTND4LP1-201ENST00000446263 157 ntBASIC0.09□□□□□ -2.4
FOXN3O00409 RNU6ATAC22P-201ENST00000516794 89 ntBASIC0.09□□□□□ -2.4
FOXN3O00409 RNU6-502P-201ENST00000362419 108 ntBASIC0.08□□□□□ -2.4
FOXN3O00409 RNU6-1216P-201ENST00000362590 107 ntBASIC0.08□□□□□ -2.4
FOXN3O00409 RNU6-668P-201ENST00000364180 107 ntBASIC0.08□□□□□ -2.4
FOXN3O00409 SNORD116-24-201ENST00000384549 92 ntBASIC0.08□□□□□ -2.4
FOXN3O00409 MIR329-2-201ENST00000385029 84 ntBASIC0.08□□□□□ -2.4
FOXN3O00409 RNU6-663P-201ENST00000391105 106 ntBASIC0.08□□□□□ -2.4
FOXN3O00409 RNU6-871P-201ENST00000516122 100 ntBASIC0.08□□□□□ -2.4
FOXN3O00409 RNU6-180P-201ENST00000516697 61 ntBASIC0.08□□□□□ -2.4
FOXN3O00409 CR383656.4-201ENST00000546909 122 ntBASIC0.08□□□□□ -2.4
FOXN3O00409 MIR548V-201ENST00000584165 80 ntBASIC0.08□□□□□ -2.4
FOXN3O00409 MIR1255B2-201ENST00000408618 67 ntBASIC0.07□□□□□ -2.4
FOXN3O00409 SNORD2-201ENST00000459163 69 ntBASIC0.07□□□□□ -2.4
FOXN3O00409 CYP3A54P-201ENST00000566950 75 ntBASIC0.07□□□□□ -2.4
FOXN3O00409 MIRLET7B-201ENST00000385140 83 ntBASIC0.06□□□□□ -2.4
FOXN3O00409 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC0.06□□□□□ -2.4
FOXN3O00409 MIR6507-201ENST00000613630 70 ntBASIC0.06□□□□□ -2.4
FOXN3O00409 MIR371B-201ENST00000638082 66 ntBASIC0.06□□□□□ -2.4
FOXN3O00409 RNU6-455P-201ENST00000384681 107 ntBASIC0.05□□□□□ -2.4
FOXN3O00409 RNU7-165P-201ENST00000458864 60 ntBASIC0.05□□□□□ -2.4
FOXN3O00409 AC244250.2-201ENST00000418731 148 ntBASIC0.04□□□□□ -2.4
FOXN3O00409 RNU6-518P-201ENST00000516056 96 ntBASIC0.04□□□□□ -2.4
FOXN3O00409 RNU6-1089P-201ENST00000516473 104 ntBASIC0.04□□□□□ -2.4
FOXN3O00409 U2.7-201ENST00000619197 100 ntBASIC0.04□□□□□ -2.4
FOXN3O00409 MIR148A-201ENST00000362215 68 ntBASIC0.03□□□□□ -2.4
FOXN3O00409 RNU6-649P-201ENST00000384463 107 ntBASIC0.03□□□□□ -2.4
FOXN3O00409 MIR4667-201ENST00000578933 66 ntBASIC0.03□□□□□ -2.4
FOXN3O00409 MIR4290-201ENST00000583807 95 ntBASIC0.03□□□□□ -2.4
FOXN3O00409 MIR6759-201ENST00000638110 65 ntBASIC0.03□□□□□ -2.4
FOXN3O00409 Y_RNA.443-201ENST00000384135 111 ntBASIC0.01□□□□□ -2.41
FOXN3O00409 RNU6-35P-201ENST00000384530 107 ntBASIC0.01□□□□□ -2.41
FOXN3O00409 MIR9-2-201ENST00000384838 87 ntBASIC0.01□□□□□ -2.41
FOXN3O00409 RNU6-630P-201ENST00000391258 106 ntBASIC0.01□□□□□ -2.41
FOXN3O00409 RNU6ATAC11P-201ENST00000408541 125 ntBASIC0□□□□□ -2.41
FOXN3O00409 snoR1.1-201ENST00000628177 80 ntBASIC0□□□□□ -2.41
FOXN3O00409 Clostridiales-1.4-201ENST00000636807 150 ntBASIC0□□□□□ -2.41
FOXN3O00409 SNORD114-16-201ENST00000363044 70 ntBASIC-0.01□□□□□ -2.41
FOXN3O00409 MIR630-201ENST00000384957 97 ntBASIC-0.01□□□□□ -2.41
FOXN3O00409 RNU6-1246P-201ENST00000391064 107 ntBASIC-0.01□□□□□ -2.41
FOXN3O00409 AL445193.1-201ENST00000441183 141 ntBASIC-0.01□□□□□ -2.41
FOXN3O00409 AC114801.3-201ENST00000510231 177 ntBASIC-0.01□□□□□ -2.41
FOXN3O00409 U6.111-201ENST00000636093 83 ntBASIC-0.01□□□□□ -2.41
FOXN3O00409 MIR519A2-201ENST00000384990 87 ntBASIC-0.02□□□□□ -2.41
FOXN3O00409 RNU6-1133P-201ENST00000410963 100 ntBASIC-0.02□□□□□ -2.41
FOXN3O00409 MIR5704-201ENST00000584029 77 ntBASIC-0.02□□□□□ -2.41
FOXN3O00409 AL391099.1-201ENST00000624635 187 ntBASIC-0.02□□□□□ -2.41
FOXN3O00409 SNORD49B-201ENST00000365172 72 ntBASIC-0.03□□□□□ -2.41
FOXN3O00409 RNU6-901P-201ENST00000384593 106 ntBASIC-0.03□□□□□ -2.41
FOXN3O00409 MIR517B-201ENST00000385102 67 ntBASIC-0.03□□□□□ -2.41
FOXN3O00409 RNU7-174P-201ENST00000516248 59 ntBASIC-0.03□□□□□ -2.41
FOXN3O00409 RNA5SP476-201ENST00000516613 103 ntBASIC-0.04□□□□□ -2.42
FOXN3O00409 AL353803.5-201ENST00000599815 141 ntBASIC-0.04□□□□□ -2.42
FOXN3O00409 AC005520.4-201ENST00000604337 90 ntBASIC-0.04□□□□□ -2.42
FOXN3O00409 SNORD114-12-201ENST00000365400 75 ntBASIC-0.05□□□□□ -2.42
FOXN3O00409 RNU6-900P-201ENST00000384498 102 ntBASIC-0.05□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 183 ms