Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 MIR4499-201ENST00000584834 69 ntBASIC-1.25□□□□□ -2.61
DDX39AO00148 Y_RNA.818-201ENST00000618813 71 ntBASIC-1.25□□□□□ -2.61
DDX39AO00148 RNU6-924P-201ENST00000362926 108 ntBASIC-1.26□□□□□ -2.61
DDX39AO00148 Y_RNA.190-201ENST00000363964 101 ntBASIC-1.26□□□□□ -2.61
DDX39AO00148 RNU6-209P-201ENST00000384118 107 ntBASIC-1.26□□□□□ -2.61
DDX39AO00148 Y_RNA.698-201ENST00000516798 118 ntBASIC-1.26□□□□□ -2.61
DDX39AO00148 RNU6-106P-201ENST00000384405 107 ntBASIC-1.27□□□□□ -2.61
DDX39AO00148 SCARNA18B-201ENST00000458806 135 ntBASIC-1.27□□□□□ -2.61
DDX39AO00148 snoU83B.1-201ENST00000517136 88 ntBASIC-1.27□□□□□ -2.61
DDX39AO00148 MIR6739-201ENST00000622461 75 ntBASIC-1.27□□□□□ -2.61
DDX39AO00148 RNU7-154P-201ENST00000516194 62 ntBASIC-1.28□□□□□ -2.61
DDX39AO00148 RNU6-774P-201ENST00000363238 107 ntBASIC-1.29□□□□□ -2.62
DDX39AO00148 RNU6-340P-201ENST00000364005 107 ntBASIC-1.29□□□□□ -2.62
DDX39AO00148 RNU6-959P-201ENST00000384671 107 ntBASIC-1.29□□□□□ -2.62
DDX39AO00148 RNU6-1064P-201ENST00000410626 104 ntBASIC-1.29□□□□□ -2.62
DDX39AO00148 AC008267.6-201ENST00000441664 139 ntBASIC-1.29□□□□□ -2.62
DDX39AO00148 RNA5SP461-201ENST00000516451 104 ntBASIC-1.29□□□□□ -2.62
DDX39AO00148 MIR378F-201ENST00000578143 78 ntBASIC-1.29□□□□□ -2.62
DDX39AO00148 RNU6-1216P-201ENST00000362590 107 ntBASIC-1.3□□□□□ -2.62
DDX39AO00148 RNA5SP192-201ENST00000364404 120 ntBASIC-1.3□□□□□ -2.62
DDX39AO00148 SNORD115-27-201ENST00000364430 82 ntBASIC-1.3□□□□□ -2.62
DDX39AO00148 SNORA19-201ENST00000384737 128 ntBASIC-1.3□□□□□ -2.62
DDX39AO00148 MIR519A2-201ENST00000384990 87 ntBASIC-1.3□□□□□ -2.62
DDX39AO00148 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC-1.3□□□□□ -2.62
DDX39AO00148 RNU6-681P-201ENST00000364012 104 ntBASIC-1.31□□□□□ -2.62
DDX39AO00148 RNU6-746P-201ENST00000384112 109 ntBASIC-1.31□□□□□ -2.62
DDX39AO00148 RNU6-518P-201ENST00000516056 96 ntBASIC-1.31□□□□□ -2.62
DDX39AO00148 MIR3115-201ENST00000577915 68 ntBASIC-1.31□□□□□ -2.62
DDX39AO00148 MIR519C-201ENST00000385053 87 ntBASIC-1.32□□□□□ -2.62
DDX39AO00148 AL078595.1-201ENST00000404458 226 ntBASIC-1.32□□□□□ -2.62
DDX39AO00148 SNORD77.2-201ENST00000391045 68 ntBASIC-1.33□□□□□ -2.62
DDX39AO00148 MIR6129-201ENST00000616087 109 ntBASIC-1.33□□□□□ -2.62
DDX39AO00148 MIR198-201ENST00000637333 62 ntBASIC-1.33□□□□□ -2.62
DDX39AO00148 RNU6-766P-201ENST00000362478 107 ntBASIC-1.34□□□□□ -2.62
DDX39AO00148 RNU6-24P-201ENST00000384440 107 ntBASIC-1.34□□□□□ -2.62
DDX39AO00148 SNORA26.4-201ENST00000391188 123 ntBASIC-1.34□□□□□ -2.62
DDX39AO00148 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC-1.34□□□□□ -2.62
DDX39AO00148 AL365222.1-201ENST00000614661 98 ntBASIC-1.34□□□□□ -2.62
DDX39AO00148 SNORD115-33-201ENST00000363723 82 ntBASIC-1.35□□□□□ -2.63
DDX39AO00148 Y_RNA.290-201ENST00000364879 114 ntBASIC-1.35□□□□□ -2.63
DDX39AO00148 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC-1.35□□□□□ -2.63
DDX39AO00148 AL035461.1-201ENST00000421490 332 ntBASIC-1.35□□□□□ -2.63
DDX39AO00148 AL021921.1-201ENST00000442774 93 ntBASIC-1.35□□□□□ -2.63
DDX39AO00148 SNORD63.1-201ENST00000516178 80 ntBASIC-1.35□□□□□ -2.63
DDX39AO00148 MIR3165-201ENST00000579874 75 ntBASIC-1.35□□□□□ -2.63
DDX39AO00148 RNU6-1233P-201ENST00000362922 102 ntBASIC-1.36□□□□□ -2.63
DDX39AO00148 Y_RNA.544-201ENST00000384650 113 ntBASIC-1.36□□□□□ -2.63
DDX39AO00148 Y_RNA.613-201ENST00000410726 97 ntBASIC-1.36□□□□□ -2.63
DDX39AO00148 MTATP8P2-201ENST00000435212 202 ntBASIC-1.36□□□□□ -2.63
DDX39AO00148 RNU6-158P-201ENST00000517104 100 ntBASIC-1.36□□□□□ -2.63
DDX39AO00148 MIR4723-201ENST00000585070 81 ntBASIC-1.36□□□□□ -2.63
DDX39AO00148 Y_RNA.264-201ENST00000364665 102 ntBASIC-1.37□□□□□ -2.63
DDX39AO00148 RNU6-81P-201ENST00000365608 104 ntBASIC-1.37□□□□□ -2.63
DDX39AO00148 RNU6-589P-201ENST00000516485 107 ntBASIC-1.37□□□□□ -2.63
DDX39AO00148 RNU6-1108P-201ENST00000516308 104 ntBASIC-1.38□□□□□ -2.63
DDX39AO00148 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC-1.38□□□□□ -2.63
DDX39AO00148 RNU6-633P-201ENST00000362612 103 ntBASIC-1.39□□□□□ -2.63
DDX39AO00148 SNORD115-37-201ENST00000363768 82 ntBASIC-1.39□□□□□ -2.63
DDX39AO00148 RNU6-1056P-201ENST00000383996 107 ntBASIC-1.39□□□□□ -2.63
DDX39AO00148 RNU6-1157P-201ENST00000384456 106 ntBASIC-1.39□□□□□ -2.63
DDX39AO00148 RNU6-656P-201ENST00000516785 107 ntBASIC-1.39□□□□□ -2.63
DDX39AO00148 FAS-AS1.1-201ENST00000615327 126 ntBASIC-1.39□□□□□ -2.63
DDX39AO00148 U4.2-201ENST00000618561 85 ntBASIC-1.39□□□□□ -2.63
DDX39AO00148 RNU6-834P-201ENST00000362367 110 ntBASIC-1.4□□□□□ -2.63
DDX39AO00148 MIR4668-201ENST00000582284 70 ntBASIC-1.41□□□□□ -2.64
DDX39AO00148 SNORD115-22-201ENST00000364456 82 ntBASIC-1.42□□□□□ -2.64
DDX39AO00148 MIR3671-201ENST00000580455 88 ntBASIC-1.42□□□□□ -2.64
DDX39AO00148 MIR3668-201ENST00000582138 75 ntBASIC-1.42□□□□□ -2.64
DDX39AO00148 MIR2052-201ENST00000636055 55 ntBASIC-1.42□□□□□ -2.64
DDX39AO00148 MIR29B1-201ENST00000385015 81 ntBASIC-1.43□□□□□ -2.64
DDX39AO00148 U2.7-201ENST00000619197 100 ntBASIC-1.43□□□□□ -2.64
DDX39AO00148 RNU6-624P-201ENST00000363411 107 ntBASIC-1.44□□□□□ -2.64
DDX39AO00148 Y_RNA.181-201ENST00000363872 101 ntBASIC-1.44□□□□□ -2.64
DDX39AO00148 AL353691.2-201ENST00000443795 59 ntBASIC-1.44□□□□□ -2.64
DDX39AO00148 TMSB4XP3-201ENST00000445144 114 ntBASIC-1.44□□□□□ -2.64
DDX39AO00148 AC093729.1-201ENST00000513074 128 ntBASIC-1.44□□□□□ -2.64
DDX39AO00148 RNU6-1238P-201ENST00000517215 102 ntBASIC-1.44□□□□□ -2.64
DDX39AO00148 MIR4306-201ENST00000583390 91 ntBASIC-1.44□□□□□ -2.64
DDX39AO00148 RNU6-1168P-201ENST00000390831 104 ntBASIC-1.45□□□□□ -2.64
DDX39AO00148 RNU6-732P-201ENST00000516033 103 ntBASIC-1.45□□□□□ -2.64
DDX39AO00148 RNU6-807P-201ENST00000516805 107 ntBASIC-1.45□□□□□ -2.64
DDX39AO00148 Y_RNA.709-201ENST00000516952 92 ntBASIC-1.45□□□□□ -2.64
DDX39AO00148 MIR548AG1-201ENST00000579932 66 ntBASIC-1.45□□□□□ -2.64
DDX39AO00148 RNU6-645P-201ENST00000364649 106 ntBASIC-1.46□□□□□ -2.64
DDX39AO00148 Y_RNA.413-201ENST00000384007 102 ntBASIC-1.46□□□□□ -2.64
DDX39AO00148 AL031737.1-201ENST00000450125 223 ntBASIC-1.46□□□□□ -2.64
DDX39AO00148 Y_RNA.754-201ENST00000476024 102 ntBASIC-1.46□□□□□ -2.64
DDX39AO00148 Y_RNA.790-201ENST00000614282 102 ntBASIC-1.46□□□□□ -2.64
DDX39AO00148 Y_RNA.782-201ENST00000614695 102 ntBASIC-1.46□□□□□ -2.64
DDX39AO00148 Y_RNA.620-201ENST00000411009 88 ntBASIC-1.47□□□□□ -2.64
DDX39AO00148 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC-1.47□□□□□ -2.64
DDX39AO00148 MIR6818-201ENST00000621576 65 ntBASIC-1.47□□□□□ -2.64
DDX39AO00148 MIR365A-201ENST00000362260 87 ntBASIC-1.48□□□□□ -2.65
DDX39AO00148 Y_RNA.348-201ENST00000365403 103 ntBASIC-1.48□□□□□ -2.65
DDX39AO00148 RNU6-22P-201ENST00000384355 107 ntBASIC-1.48□□□□□ -2.65
DDX39AO00148 RNU6-246P-201ENST00000384702 107 ntBASIC-1.48□□□□□ -2.65
DDX39AO00148 RNU4-61P-201ENST00000411243 107 ntBASIC-1.48□□□□□ -2.65
DDX39AO00148 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-1.48□□□□□ -2.65
DDX39AO00148 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-1.48□□□□□ -2.65
DDX39AO00148 AC132825.6-201ENST00000638861 357 ntBASIC-1.48□□□□□ -2.65
Retrieved 100 of 98,524 protein–RNA pairs in 180.6 ms