Protein–RNA interactions for Protein: A0A096LPE2

SAA2-SAA4, SAA2-SAA4 readthrough, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SAA2-SAA4A0A096LPE2 RNU6-1241P-201ENST00000384536 107 ntBASIC-0.04□□□□□ -2.42
SAA2-SAA4A0A096LPE2 MIR9-2-201ENST00000384838 87 ntBASIC-0.04□□□□□ -2.42
SAA2-SAA4A0A096LPE2 MIRLET7B-201ENST00000385140 83 ntBASIC-0.04□□□□□ -2.42
SAA2-SAA4A0A096LPE2 RNU6-523P-201ENST00000516304 54 ntBASIC-0.04□□□□□ -2.42
SAA2-SAA4A0A096LPE2 RNU6-881P-201ENST00000516813 102 ntBASIC-0.04□□□□□ -2.42
SAA2-SAA4A0A096LPE2 FAS-AS1.1-201ENST00000615327 126 ntBASIC-0.04□□□□□ -2.42
SAA2-SAA4A0A096LPE2 RNU6-645P-201ENST00000364649 106 ntBASIC-0.05□□□□□ -2.42
SAA2-SAA4A0A096LPE2 RNU6-687P-201ENST00000516443 89 ntBASIC-0.05□□□□□ -2.42
SAA2-SAA4A0A096LPE2 U6.96-201ENST00000636425 70 ntBASIC-0.05□□□□□ -2.42
SAA2-SAA4A0A096LPE2 MIR330-201ENST00000362196 94 ntBASIC-0.06□□□□□ -2.42
SAA2-SAA4A0A096LPE2 Y_RNA.244-201ENST00000364484 109 ntBASIC-0.06□□□□□ -2.42
SAA2-SAA4A0A096LPE2 SNORD45A-201ENST00000384512 84 ntBASIC-0.06□□□□□ -2.42
SAA2-SAA4A0A096LPE2 MIR889-201ENST00000401280 79 ntBASIC-0.06□□□□□ -2.42
SAA2-SAA4A0A096LPE2 Y_RNA.681-201ENST00000516445 113 ntBASIC-0.06□□□□□ -2.42
SAA2-SAA4A0A096LPE2 MIR8087-201ENST00000612745 78 ntBASIC-0.06□□□□□ -2.42
SAA2-SAA4A0A096LPE2 RNU6-1162P-201ENST00000384443 104 ntBASIC-0.07□□□□□ -2.42
SAA2-SAA4A0A096LPE2 MIR4768-201ENST00000585270 74 ntBASIC-0.07□□□□□ -2.42
SAA2-SAA4A0A096LPE2 SNORD113.1-201ENST00000363280 73 ntBASIC-0.08□□□□□ -2.42
SAA2-SAA4A0A096LPE2 SNORD115-31-201ENST00000365318 82 ntBASIC-0.08□□□□□ -2.42
SAA2-SAA4A0A096LPE2 RNU6-46P-201ENST00000383860 107 ntBASIC-0.08□□□□□ -2.42
SAA2-SAA4A0A096LPE2 RNU6-455P-201ENST00000384681 107 ntBASIC-0.08□□□□□ -2.42
SAA2-SAA4A0A096LPE2 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.08□□□□□ -2.42
SAA2-SAA4A0A096LPE2 RNA5SP63-201ENST00000391225 112 ntBASIC-0.08□□□□□ -2.42
SAA2-SAA4A0A096LPE2 RNU6-587P-201ENST00000391282 106 ntBASIC-0.08□□□□□ -2.42
SAA2-SAA4A0A096LPE2 MIR1197-201ENST00000408818 88 ntBASIC-0.08□□□□□ -2.42
SAA2-SAA4A0A096LPE2 RNU7-55P-201ENST00000459426 62 ntBASIC-0.08□□□□□ -2.42
SAA2-SAA4A0A096LPE2 RNU6-1015P-201ENST00000517121 99 ntBASIC-0.08□□□□□ -2.42
SAA2-SAA4A0A096LPE2 CYP3A54P-201ENST00000566950 75 ntBASIC-0.08□□□□□ -2.42
SAA2-SAA4A0A096LPE2 MIR8053-201ENST00000613344 75 ntBASIC-0.09□□□□□ -2.42
SAA2-SAA4A0A096LPE2 SNORD115-23-201ENST00000364461 82 ntBASIC-0.1□□□□□ -2.43
SAA2-SAA4A0A096LPE2 RNU6-411P-201ENST00000384451 107 ntBASIC-0.1□□□□□ -2.43
SAA2-SAA4A0A096LPE2 RNU6-900P-201ENST00000384498 102 ntBASIC-0.1□□□□□ -2.43
SAA2-SAA4A0A096LPE2 RNA5SP480-201ENST00000516840 109 ntBASIC-0.1□□□□□ -2.43
SAA2-SAA4A0A096LPE2 MIR5190-201ENST00000581537 80 ntBASIC-0.1□□□□□ -2.43
SAA2-SAA4A0A096LPE2 MIR7111-201ENST00000619751 72 ntBASIC-0.1□□□□□ -2.43
SAA2-SAA4A0A096LPE2 SNORD49B-201ENST00000365172 72 ntBASIC-0.11□□□□□ -2.43
SAA2-SAA4A0A096LPE2 U2.7-201ENST00000619197 100 ntBASIC-0.11□□□□□ -2.43
SAA2-SAA4A0A096LPE2 MIR371B-201ENST00000638082 66 ntBASIC-0.11□□□□□ -2.43
SAA2-SAA4A0A096LPE2 MIR154-201ENST00000385243 84 ntBASIC-0.12□□□□□ -2.43
SAA2-SAA4A0A096LPE2 MIR1255B2-201ENST00000408618 67 ntBASIC-0.12□□□□□ -2.43
SAA2-SAA4A0A096LPE2 AC104692.1-201ENST00000472406 90 ntBASIC-0.12□□□□□ -2.43
SAA2-SAA4A0A096LPE2 RNA5SP330-201ENST00000517096 96 ntBASIC-0.12□□□□□ -2.43
SAA2-SAA4A0A096LPE2 uc_338.36-201ENST00000622331 158 ntBASIC-0.12□□□□□ -2.43
SAA2-SAA4A0A096LPE2 Y_RNA.205-201ENST00000364128 113 ntBASIC-0.13□□□□□ -2.43
SAA2-SAA4A0A096LPE2 RNU6-776P-201ENST00000364403 104 ntBASIC-0.13□□□□□ -2.43
SAA2-SAA4A0A096LPE2 RNU6-1022P-201ENST00000365049 104 ntBASIC-0.13□□□□□ -2.43
SAA2-SAA4A0A096LPE2 SNORD116-24-201ENST00000384549 92 ntBASIC-0.13□□□□□ -2.43
SAA2-SAA4A0A096LPE2 SNORD56B-201ENST00000384713 71 ntBASIC-0.13□□□□□ -2.43
SAA2-SAA4A0A096LPE2 RNU6-634P-201ENST00000459134 106 ntBASIC-0.14□□□□□ -2.43
SAA2-SAA4A0A096LPE2 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-0.14□□□□□ -2.43
SAA2-SAA4A0A096LPE2 AL391099.1-201ENST00000624635 187 ntBASIC-0.14□□□□□ -2.43
SAA2-SAA4A0A096LPE2 RNU6-973P-201ENST00000364690 107 ntBASIC-0.15□□□□□ -2.43
SAA2-SAA4A0A096LPE2 RNU6-638P-201ENST00000516582 104 ntBASIC-0.15□□□□□ -2.43
SAA2-SAA4A0A096LPE2 AL590491.3-201ENST00000610731 82 ntBASIC-0.15□□□□□ -2.43
SAA2-SAA4A0A096LPE2 SNORA18.1-201ENST00000363418 128 ntBASIC-0.16□□□□□ -2.44
SAA2-SAA4A0A096LPE2 SNORD114-12-201ENST00000365400 75 ntBASIC-0.16□□□□□ -2.44
SAA2-SAA4A0A096LPE2 Y_RNA.545-201ENST00000384652 105 ntBASIC-0.16□□□□□ -2.44
SAA2-SAA4A0A096LPE2 AC096531.1-201ENST00000419107 107 ntBASIC-0.16□□□□□ -2.44
SAA2-SAA4A0A096LPE2 RNU6-1089P-201ENST00000516473 104 ntBASIC-0.16□□□□□ -2.44
SAA2-SAA4A0A096LPE2 MIR1295B-201ENST00000636144 60 ntBASIC-0.16□□□□□ -2.44
SAA2-SAA4A0A096LPE2 RNU6-540P-201ENST00000384622 101 ntBASIC-0.17□□□□□ -2.44
SAA2-SAA4A0A096LPE2 MIR519A2-201ENST00000384990 87 ntBASIC-0.17□□□□□ -2.44
SAA2-SAA4A0A096LPE2 MIR5704-201ENST00000584029 77 ntBASIC-0.17□□□□□ -2.44
SAA2-SAA4A0A096LPE2 MIR4662A-201ENST00000637499 67 ntBASIC-0.17□□□□□ -2.44
SAA2-SAA4A0A096LPE2 Y_RNA.115-201ENST00000363272 98 ntBASIC-0.18□□□□□ -2.44
SAA2-SAA4A0A096LPE2 Y_RNA.565-201ENST00000384719 101 ntBASIC-0.18□□□□□ -2.44
SAA2-SAA4A0A096LPE2 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-0.18□□□□□ -2.44
SAA2-SAA4A0A096LPE2 SNORD4A-201ENST00000459174 72 ntBASIC-0.18□□□□□ -2.44
SAA2-SAA4A0A096LPE2 RNU7-174P-201ENST00000516248 59 ntBASIC-0.18□□□□□ -2.44
SAA2-SAA4A0A096LPE2 MIR4432-201ENST00000581823 84 ntBASIC-0.18□□□□□ -2.44
SAA2-SAA4A0A096LPE2 MIR4280-201ENST00000582178 76 ntBASIC-0.18□□□□□ -2.44
SAA2-SAA4A0A096LPE2 RNU6-1216P-201ENST00000362590 107 ntBASIC-0.19□□□□□ -2.44
SAA2-SAA4A0A096LPE2 Y_RNA.540-201ENST00000384638 111 ntBASIC-0.19□□□□□ -2.44
SAA2-SAA4A0A096LPE2 MTND4LP1-201ENST00000446263 157 ntBASIC-0.19□□□□□ -2.44
SAA2-SAA4A0A096LPE2 RNU6-518P-201ENST00000516056 96 ntBASIC-0.19□□□□□ -2.44
SAA2-SAA4A0A096LPE2 MIR548AG1-201ENST00000579932 66 ntBASIC-0.19□□□□□ -2.44
SAA2-SAA4A0A096LPE2 MIR8068-201ENST00000618032 68 ntBASIC-0.19□□□□□ -2.44
SAA2-SAA4A0A096LPE2 AL109933.3-201ENST00000619095 188 ntBASIC-0.19□□□□□ -2.44
SAA2-SAA4A0A096LPE2 RNU6-668P-201ENST00000364180 107 ntBASIC-0.2□□□□□ -2.44
SAA2-SAA4A0A096LPE2 MIR4464-201ENST00000580818 92 ntBASIC-0.2□□□□□ -2.44
SAA2-SAA4A0A096LPE2 AL353803.5-201ENST00000599815 141 ntBASIC-0.2□□□□□ -2.44
SAA2-SAA4A0A096LPE2 MIR3666-201ENST00000607845 111 ntBASIC-0.2□□□□□ -2.44
SAA2-SAA4A0A096LPE2 MIR2909-201ENST00000617113 69 ntBASIC-0.2□□□□□ -2.44
SAA2-SAA4A0A096LPE2 MIR6779-201ENST00000617283 64 ntBASIC-0.2□□□□□ -2.44
SAA2-SAA4A0A096LPE2 SNORA32.1-201ENST00000364514 115 ntBASIC-0.21□□□□□ -2.44
SAA2-SAA4A0A096LPE2 RNU6-895P-201ENST00000384125 103 ntBASIC-0.21□□□□□ -2.44
SAA2-SAA4A0A096LPE2 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.21□□□□□ -2.44
SAA2-SAA4A0A096LPE2 RNU6-1133P-201ENST00000410963 100 ntBASIC-0.21□□□□□ -2.44
SAA2-SAA4A0A096LPE2 AC114755.3-201ENST00000481111 251 ntBASIC-0.21□□□□□ -2.44
SAA2-SAA4A0A096LPE2 RNU7-154P-201ENST00000516194 62 ntBASIC-0.21□□□□□ -2.44
SAA2-SAA4A0A096LPE2 RNA5SP470-201ENST00000516463 106 ntBASIC-0.21□□□□□ -2.44
SAA2-SAA4A0A096LPE2 snoR1.1-201ENST00000628177 80 ntBASIC-0.21□□□□□ -2.44
SAA2-SAA4A0A096LPE2 RNU6-901P-201ENST00000384593 106 ntBASIC-0.22□□□□□ -2.44
SAA2-SAA4A0A096LPE2 MIR548C-201ENST00000384815 97 ntBASIC-0.22□□□□□ -2.44
SAA2-SAA4A0A096LPE2 AL445193.1-201ENST00000441183 141 ntBASIC-0.22□□□□□ -2.44
SAA2-SAA4A0A096LPE2 AL021921.1-201ENST00000442774 93 ntBASIC-0.22□□□□□ -2.44
SAA2-SAA4A0A096LPE2 RNA5SP300-201ENST00000391197 107 ntBASIC-0.23□□□□□ -2.45
SAA2-SAA4A0A096LPE2 U4.4-201ENST00000620626 117 ntBASIC-0.23□□□□□ -2.45
SAA2-SAA4A0A096LPE2 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.23□□□□□ -2.45
SAA2-SAA4A0A096LPE2 RNU6-302P-201ENST00000365249 107 ntBASIC-0.24□□□□□ -2.45
Retrieved 100 of 98,524 protein–RNA pairs in 177.6 ms