Protein–RNA interactions for Protein: Q9Z0S4

Cldn13, Claudin-13, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn13Q9Z0S4 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Cldn13Q9Z0S4 Gm17807-201ENSMUST00000186869 298 ntBASIC14.26□□□□□ -0.13
Cldn13Q9Z0S4 Ighv6-1-201ENSMUST00000193612 343 ntBASIC14.26□□□□□ -0.13
Cldn13Q9Z0S4 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC14.26□□□□□ -0.13
Cldn13Q9Z0S4 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cldn13Q9Z0S4 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Cldn13Q9Z0S4 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cldn13Q9Z0S4 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cldn13Q9Z0S4 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cldn13Q9Z0S4 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Cldn13Q9Z0S4 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cldn13Q9Z0S4 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cldn13Q9Z0S4 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cldn13Q9Z0S4 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Cldn13Q9Z0S4 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cldn13Q9Z0S4 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC14.25□□□□□ -0.13
Cldn13Q9Z0S4 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cldn13Q9Z0S4 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC14.25□□□□□ -0.13
Cldn13Q9Z0S4 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cldn13Q9Z0S4 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cldn13Q9Z0S4 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cldn13Q9Z0S4 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC14.25□□□□□ -0.13
Cldn13Q9Z0S4 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Cldn13Q9Z0S4 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cldn13Q9Z0S4 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Cldn13Q9Z0S4 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cldn13Q9Z0S4 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
Cldn13Q9Z0S4 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cldn13Q9Z0S4 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cldn13Q9Z0S4 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cldn13Q9Z0S4 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC14.25□□□□□ -0.13
Cldn13Q9Z0S4 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cldn13Q9Z0S4 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
Cldn13Q9Z0S4 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cldn13Q9Z0S4 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cldn13Q9Z0S4 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cldn13Q9Z0S4 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cldn13Q9Z0S4 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cldn13Q9Z0S4 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cldn13Q9Z0S4 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cldn13Q9Z0S4 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cldn13Q9Z0S4 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cldn13Q9Z0S4 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cldn13Q9Z0S4 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cldn13Q9Z0S4 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Cldn13Q9Z0S4 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cldn13Q9Z0S4 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cldn13Q9Z0S4 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cldn13Q9Z0S4 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC14.25□□□□□ -0.13
Cldn13Q9Z0S4 Gm42473-201ENSMUST00000201056 2291 ntBASIC14.25□□□□□ -0.13
Cldn13Q9Z0S4 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Cldn13Q9Z0S4 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
Cldn13Q9Z0S4 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cldn13Q9Z0S4 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cldn13Q9Z0S4 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Cldn13Q9Z0S4 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cldn13Q9Z0S4 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC14.24□□□□□ -0.13
Cldn13Q9Z0S4 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC14.24□□□□□ -0.13
Cldn13Q9Z0S4 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cldn13Q9Z0S4 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC14.24□□□□□ -0.13
Cldn13Q9Z0S4 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cldn13Q9Z0S4 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
Cldn13Q9Z0S4 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Cldn13Q9Z0S4 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Cldn13Q9Z0S4 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cldn13Q9Z0S4 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cldn13Q9Z0S4 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC14.24□□□□□ -0.13
Cldn13Q9Z0S4 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
Cldn13Q9Z0S4 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cldn13Q9Z0S4 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC14.24□□□□□ -0.13
Cldn13Q9Z0S4 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC14.24□□□□□ -0.13
Cldn13Q9Z0S4 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Cldn13Q9Z0S4 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
Cldn13Q9Z0S4 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Cldn13Q9Z0S4 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC14.24□□□□□ -0.13
Cldn13Q9Z0S4 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Cldn13Q9Z0S4 AC125350.1-201ENSMUST00000225115 903 ntBASIC14.24□□□□□ -0.13
Cldn13Q9Z0S4 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cldn13Q9Z0S4 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
Cldn13Q9Z0S4 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cldn13Q9Z0S4 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cldn13Q9Z0S4 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cldn13Q9Z0S4 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Cldn13Q9Z0S4 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cldn13Q9Z0S4 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
Cldn13Q9Z0S4 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cldn13Q9Z0S4 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cldn13Q9Z0S4 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
Cldn13Q9Z0S4 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cldn13Q9Z0S4 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC14.24□□□□□ -0.13
Cldn13Q9Z0S4 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cldn13Q9Z0S4 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Cldn13Q9Z0S4 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cldn13Q9Z0S4 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cldn13Q9Z0S4 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cldn13Q9Z0S4 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Cldn13Q9Z0S4 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cldn13Q9Z0S4 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cldn13Q9Z0S4 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC14.23□□□□□ -0.13
Cldn13Q9Z0S4 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms