Protein–RNA interactions for Protein: Q9R061

Nubp2, Cytosolic Fe-S cluster assembly factor NUBP2, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nubp2Q9R061 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nubp2Q9R061 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Nubp2Q9R061 Gm6190-201ENSMUST00000220683 1374 ntBASIC14.19□□□□□ -0.14
Nubp2Q9R061 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nubp2Q9R061 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Nubp2Q9R061 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nubp2Q9R061 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nubp2Q9R061 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC14.18□□□□□ -0.14
Nubp2Q9R061 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nubp2Q9R061 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Nubp2Q9R061 Phf7-203ENSMUST00000226565 1971 ntBASIC14.18□□□□□ -0.14
Nubp2Q9R061 Wnt10b-206ENSMUST00000228546 2709 ntBASIC14.18□□□□□ -0.14
Nubp2Q9R061 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Nubp2Q9R061 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nubp2Q9R061 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC14.18□□□□□ -0.14
Nubp2Q9R061 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nubp2Q9R061 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC14.18□□□□□ -0.14
Nubp2Q9R061 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC14.18□□□□□ -0.14
Nubp2Q9R061 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Nubp2Q9R061 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC14.18□□□□□ -0.14
Nubp2Q9R061 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Nubp2Q9R061 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nubp2Q9R061 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nubp2Q9R061 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nubp2Q9R061 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Nubp2Q9R061 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Nubp2Q9R061 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nubp2Q9R061 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nubp2Q9R061 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nubp2Q9R061 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nubp2Q9R061 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nubp2Q9R061 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nubp2Q9R061 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nubp2Q9R061 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nubp2Q9R061 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nubp2Q9R061 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nubp2Q9R061 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Nubp2Q9R061 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nubp2Q9R061 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nubp2Q9R061 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nubp2Q9R061 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Nubp2Q9R061 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nubp2Q9R061 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nubp2Q9R061 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC14.17□□□□□ -0.14
Nubp2Q9R061 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Nubp2Q9R061 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Nubp2Q9R061 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Nubp2Q9R061 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC14.17□□□□□ -0.14
Nubp2Q9R061 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC14.17□□□□□ -0.14
Nubp2Q9R061 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Nubp2Q9R061 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nubp2Q9R061 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nubp2Q9R061 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nubp2Q9R061 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC14.17□□□□□ -0.14
Nubp2Q9R061 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Nubp2Q9R061 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nubp2Q9R061 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nubp2Q9R061 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Nubp2Q9R061 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nubp2Q9R061 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Nubp2Q9R061 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nubp2Q9R061 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nubp2Q9R061 Gm45203-201ENSMUST00000206384 1831 ntBASIC14.16□□□□□ -0.14
Nubp2Q9R061 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC14.16□□□□□ -0.14
Nubp2Q9R061 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nubp2Q9R061 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nubp2Q9R061 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Nubp2Q9R061 Gm17807-201ENSMUST00000186869 298 ntBASIC14.16□□□□□ -0.14
Nubp2Q9R061 Ighv6-1-201ENSMUST00000193612 343 ntBASIC14.16□□□□□ -0.14
Nubp2Q9R061 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nubp2Q9R061 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Nubp2Q9R061 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Nubp2Q9R061 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nubp2Q9R061 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Nubp2Q9R061 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nubp2Q9R061 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Nubp2Q9R061 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC14.16□□□□□ -0.14
Nubp2Q9R061 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nubp2Q9R061 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Nubp2Q9R061 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nubp2Q9R061 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC14.16□□□□□ -0.14
Nubp2Q9R061 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nubp2Q9R061 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nubp2Q9R061 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nubp2Q9R061 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Nubp2Q9R061 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Nubp2Q9R061 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nubp2Q9R061 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nubp2Q9R061 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Nubp2Q9R061 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nubp2Q9R061 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nubp2Q9R061 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nubp2Q9R061 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC14.15□□□□□ -0.14
Nubp2Q9R061 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nubp2Q9R061 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nubp2Q9R061 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Nubp2Q9R061 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Nubp2Q9R061 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Nubp2Q9R061 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Nubp2Q9R061 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 54.1 ms