Protein–RNA interactions for Protein: Q9EQM3

Nkx2-4, Homeobox protein Nkx-2.4, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-4Q9EQM3 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC16.34■□□□□ 0.21
Nkx2-4Q9EQM3 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Nkx2-4Q9EQM3 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Nkx2-4Q9EQM3 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC16.33■□□□□ 0.21
Nkx2-4Q9EQM3 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Nkx2-4Q9EQM3 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Nkx2-4Q9EQM3 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Nkx2-4Q9EQM3 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC16.33■□□□□ 0.21
Nkx2-4Q9EQM3 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Nkx2-4Q9EQM3 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC16.33■□□□□ 0.2
Nkx2-4Q9EQM3 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC16.33■□□□□ 0.2
Nkx2-4Q9EQM3 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC16.33■□□□□ 0.2
Nkx2-4Q9EQM3 Gm27622-201ENSMUST00000183779 60 ntBASIC16.33■□□□□ 0.2
Nkx2-4Q9EQM3 Gm5628-201ENSMUST00000222318 1049 ntBASIC16.33■□□□□ 0.2
Nkx2-4Q9EQM3 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
Nkx2-4Q9EQM3 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Nkx2-4Q9EQM3 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Nkx2-4Q9EQM3 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Nkx2-4Q9EQM3 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Nkx2-4Q9EQM3 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Nkx2-4Q9EQM3 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Nkx2-4Q9EQM3 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Nkx2-4Q9EQM3 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Nkx2-4Q9EQM3 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Nkx2-4Q9EQM3 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Nkx2-4Q9EQM3 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Nkx2-4Q9EQM3 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Nkx2-4Q9EQM3 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC16.33■□□□□ 0.2
Nkx2-4Q9EQM3 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nkx2-4Q9EQM3 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nkx2-4Q9EQM3 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nkx2-4Q9EQM3 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nkx2-4Q9EQM3 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nkx2-4Q9EQM3 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nkx2-4Q9EQM3 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nkx2-4Q9EQM3 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Nkx2-4Q9EQM3 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC16.32■□□□□ 0.2
Nkx2-4Q9EQM3 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Nkx2-4Q9EQM3 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC16.32■□□□□ 0.2
Nkx2-4Q9EQM3 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nkx2-4Q9EQM3 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC16.32■□□□□ 0.2
Nkx2-4Q9EQM3 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nkx2-4Q9EQM3 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Nkx2-4Q9EQM3 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nkx2-4Q9EQM3 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Nkx2-4Q9EQM3 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC16.32■□□□□ 0.2
Nkx2-4Q9EQM3 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nkx2-4Q9EQM3 Gm8969-201ENSMUST00000199694 526 ntBASIC16.32■□□□□ 0.2
Nkx2-4Q9EQM3 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC16.32■□□□□ 0.2
Nkx2-4Q9EQM3 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nkx2-4Q9EQM3 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Nkx2-4Q9EQM3 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Nkx2-4Q9EQM3 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Nkx2-4Q9EQM3 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nkx2-4Q9EQM3 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Nkx2-4Q9EQM3 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC16.32■□□□□ 0.2
Nkx2-4Q9EQM3 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC16.32■□□□□ 0.2
Nkx2-4Q9EQM3 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nkx2-4Q9EQM3 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nkx2-4Q9EQM3 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC16.32■□□□□ 0.2
Nkx2-4Q9EQM3 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nkx2-4Q9EQM3 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nkx2-4Q9EQM3 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nkx2-4Q9EQM3 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
Nkx2-4Q9EQM3 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nkx2-4Q9EQM3 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nkx2-4Q9EQM3 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Nkx2-4Q9EQM3 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nkx2-4Q9EQM3 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Nkx2-4Q9EQM3 Gm13294-201ENSMUST00000121757 1330 ntBASIC16.31■□□□□ 0.2
Nkx2-4Q9EQM3 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Nkx2-4Q9EQM3 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Nkx2-4Q9EQM3 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC16.31■□□□□ 0.2
Nkx2-4Q9EQM3 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC16.31■□□□□ 0.2
Nkx2-4Q9EQM3 Gm7774-201ENSMUST00000200064 533 ntBASIC16.31■□□□□ 0.2
Nkx2-4Q9EQM3 Gm20553-201ENSMUST00000204205 844 ntBASIC16.31■□□□□ 0.2
Nkx2-4Q9EQM3 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC16.31■□□□□ 0.2
Nkx2-4Q9EQM3 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nkx2-4Q9EQM3 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nkx2-4Q9EQM3 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nkx2-4Q9EQM3 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC16.31■□□□□ 0.2
Nkx2-4Q9EQM3 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nkx2-4Q9EQM3 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nkx2-4Q9EQM3 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nkx2-4Q9EQM3 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nkx2-4Q9EQM3 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nkx2-4Q9EQM3 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nkx2-4Q9EQM3 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nkx2-4Q9EQM3 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
Nkx2-4Q9EQM3 Zcchc6-207ENSMUST00000225576 2499 ntBASIC16.3■□□□□ 0.2
Nkx2-4Q9EQM3 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nkx2-4Q9EQM3 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nkx2-4Q9EQM3 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC16.3■□□□□ 0.2
Nkx2-4Q9EQM3 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Nkx2-4Q9EQM3 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Nkx2-4Q9EQM3 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nkx2-4Q9EQM3 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Nkx2-4Q9EQM3 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nkx2-4Q9EQM3 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Nkx2-4Q9EQM3 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms