Protein–RNA interactions for Protein: Q9D995

Cntd1, Cyclin N-terminal domain-containing protein 1, mousemouse

Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntd1Q9D995 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Cntd1Q9D995 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Cntd1Q9D995 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC15.21■□□□□ 0.02
Cntd1Q9D995 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Cntd1Q9D995 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Cntd1Q9D995 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC15.21■□□□□ 0.02
Cntd1Q9D995 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC15.2■□□□□ 0.02
Cntd1Q9D995 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Cntd1Q9D995 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cntd1Q9D995 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Cntd1Q9D995 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cntd1Q9D995 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Cntd1Q9D995 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cntd1Q9D995 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Cntd1Q9D995 Gm44729-201ENSMUST00000206759 2052 ntBASIC15.2■□□□□ 0.02
Cntd1Q9D995 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cntd1Q9D995 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Cntd1Q9D995 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cntd1Q9D995 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Cntd1Q9D995 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
Cntd1Q9D995 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
Cntd1Q9D995 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC15.2■□□□□ 0.02
Cntd1Q9D995 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC15.2■□□□□ 0.02
Cntd1Q9D995 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC15.2■□□□□ 0.02
Cntd1Q9D995 Gm3272-201ENSMUST00000181181 1229 ntBASIC15.2■□□□□ 0.02
Cntd1Q9D995 Gm44450-201ENSMUST00000199528 114 ntBASIC15.2■□□□□ 0.02
Cntd1Q9D995 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cntd1Q9D995 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Cntd1Q9D995 Gm10566-201ENSMUST00000086739 996 ntBASIC15.2■□□□□ 0.02
Cntd1Q9D995 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Cntd1Q9D995 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cntd1Q9D995 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC15.2■□□□□ 0.02
Cntd1Q9D995 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cntd1Q9D995 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Cntd1Q9D995 AC154412.1-201ENSMUST00000226540 2786 ntBASIC15.2■□□□□ 0.02
Cntd1Q9D995 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Cntd1Q9D995 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC15.2■□□□□ 0.02
Cntd1Q9D995 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cntd1Q9D995 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cntd1Q9D995 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cntd1Q9D995 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cntd1Q9D995 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cntd1Q9D995 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC15.2■□□□□ 0.02
Cntd1Q9D995 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC15.2■□□□□ 0.02
Cntd1Q9D995 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cntd1Q9D995 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cntd1Q9D995 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cntd1Q9D995 Rbfox2-206ENSMUST00000227314 1810 ntBASIC15.2■□□□□ 0.02
Cntd1Q9D995 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Cntd1Q9D995 Zfp264-201ENSMUST00000208656 1563 ntBASIC15.19■□□□□ 0.02
Cntd1Q9D995 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC15.19■□□□□ 0.02
Cntd1Q9D995 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cntd1Q9D995 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cntd1Q9D995 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Cntd1Q9D995 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC15.19■□□□□ 0.02
Cntd1Q9D995 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cntd1Q9D995 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cntd1Q9D995 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cntd1Q9D995 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Cntd1Q9D995 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Cntd1Q9D995 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC15.19■□□□□ 0.02
Cntd1Q9D995 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cntd1Q9D995 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cntd1Q9D995 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cntd1Q9D995 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cntd1Q9D995 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cntd1Q9D995 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Cntd1Q9D995 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Cntd1Q9D995 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Cntd1Q9D995 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cntd1Q9D995 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cntd1Q9D995 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cntd1Q9D995 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Cntd1Q9D995 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC15.18■□□□□ 0.02
Cntd1Q9D995 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cntd1Q9D995 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cntd1Q9D995 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cntd1Q9D995 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC15.18■□□□□ 0.02
Cntd1Q9D995 AL672049.1-201ENSMUST00000197943 91 ntBASIC15.18■□□□□ 0.02
Cntd1Q9D995 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC15.18■□□□□ 0.02
Cntd1Q9D995 Gm18115-201ENSMUST00000221209 621 ntBASIC15.18■□□□□ 0.02
Cntd1Q9D995 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cntd1Q9D995 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Cntd1Q9D995 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cntd1Q9D995 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cntd1Q9D995 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Cntd1Q9D995 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cntd1Q9D995 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC15.18■□□□□ 0.02
Cntd1Q9D995 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cntd1Q9D995 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Cntd1Q9D995 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cntd1Q9D995 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Cntd1Q9D995 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cntd1Q9D995 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cntd1Q9D995 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Cntd1Q9D995 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cntd1Q9D995 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cntd1Q9D995 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC15.17■□□□□ 0.02
Cntd1Q9D995 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cntd1Q9D995 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms