Protein–RNA interactions for Protein: Q9CQV4

Retreg3, Reticulophagy regulator 3, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg3Q9CQV4 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Retreg3Q9CQV4 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Retreg3Q9CQV4 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Retreg3Q9CQV4 Gemin6-201ENSMUST00000069486 1134 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Retreg3Q9CQV4 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Retreg3Q9CQV4 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Retreg3Q9CQV4 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Retreg3Q9CQV4 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Retreg3Q9CQV4 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Retreg3Q9CQV4 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Retreg3Q9CQV4 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Retreg3Q9CQV4 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Retreg3Q9CQV4 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Retreg3Q9CQV4 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Retreg3Q9CQV4 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Retreg3Q9CQV4 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Retreg3Q9CQV4 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
Retreg3Q9CQV4 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Retreg3Q9CQV4 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC16.05■□□□□ 0.16
Retreg3Q9CQV4 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Retreg3Q9CQV4 AC154248.2-201ENSMUST00000221964 659 ntTSL 5 BASIC16.05■□□□□ 0.16
Retreg3Q9CQV4 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Retreg3Q9CQV4 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Retreg3Q9CQV4 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Retreg3Q9CQV4 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Retreg3Q9CQV4 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Retreg3Q9CQV4 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC16.05■□□□□ 0.16
Retreg3Q9CQV4 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Retreg3Q9CQV4 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
Retreg3Q9CQV4 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Retreg3Q9CQV4 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Retreg3Q9CQV4 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Retreg3Q9CQV4 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Retreg3Q9CQV4 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Retreg3Q9CQV4 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Retreg3Q9CQV4 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Retreg3Q9CQV4 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Retreg3Q9CQV4 Gm1818-201ENSMUST00000169406 1184 ntBASIC16.04■□□□□ 0.16
Retreg3Q9CQV4 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC16.04■□□□□ 0.16
Retreg3Q9CQV4 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Retreg3Q9CQV4 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Retreg3Q9CQV4 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Retreg3Q9CQV4 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Retreg3Q9CQV4 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Retreg3Q9CQV4 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Retreg3Q9CQV4 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Retreg3Q9CQV4 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Retreg3Q9CQV4 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Retreg3Q9CQV4 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Retreg3Q9CQV4 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Retreg3Q9CQV4 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Retreg3Q9CQV4 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Retreg3Q9CQV4 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Retreg3Q9CQV4 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Retreg3Q9CQV4 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC16.03■□□□□ 0.16
Retreg3Q9CQV4 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Retreg3Q9CQV4 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Retreg3Q9CQV4 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
Retreg3Q9CQV4 Gm12849-201ENSMUST00000120013 739 ntBASIC16.03■□□□□ 0.16
Retreg3Q9CQV4 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Retreg3Q9CQV4 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC16.03■□□□□ 0.16
Retreg3Q9CQV4 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC16.03■□□□□ 0.16
Retreg3Q9CQV4 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC16.03■□□□□ 0.16
Retreg3Q9CQV4 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC16.03■□□□□ 0.16
Retreg3Q9CQV4 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC16.03■□□□□ 0.16
Retreg3Q9CQV4 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Retreg3Q9CQV4 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Retreg3Q9CQV4 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Retreg3Q9CQV4 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Retreg3Q9CQV4 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Retreg3Q9CQV4 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Retreg3Q9CQV4 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Retreg3Q9CQV4 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC16.02■□□□□ 0.16
Retreg3Q9CQV4 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
Retreg3Q9CQV4 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Retreg3Q9CQV4 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Retreg3Q9CQV4 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Retreg3Q9CQV4 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
Retreg3Q9CQV4 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Retreg3Q9CQV4 Gm26540-201ENSMUST00000181858 1310 ntTSL 5 BASIC16.02■□□□□ 0.16
Retreg3Q9CQV4 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Retreg3Q9CQV4 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Retreg3Q9CQV4 Rprl3-201ENSMUST00000157400 290 ntBASIC16.02■□□□□ 0.16
Retreg3Q9CQV4 Gm27867-201ENSMUST00000184778 125 ntBASIC16.02■□□□□ 0.16
Retreg3Q9CQV4 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Retreg3Q9CQV4 Gm44454-201ENSMUST00000198541 138 ntBASIC16.02■□□□□ 0.16
Retreg3Q9CQV4 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC16.02■□□□□ 0.16
Retreg3Q9CQV4 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC16.02■□□□□ 0.16
Retreg3Q9CQV4 AC153526.5-201ENSMUST00000218661 2147 ntBASIC16.02■□□□□ 0.16
Retreg3Q9CQV4 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
Retreg3Q9CQV4 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC16.02■□□□□ 0.16
Retreg3Q9CQV4 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Retreg3Q9CQV4 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Retreg3Q9CQV4 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Retreg3Q9CQV4 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Retreg3Q9CQV4 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
Retreg3Q9CQV4 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
Retreg3Q9CQV4 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Retreg3Q9CQV4 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Retreg3Q9CQV4 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms