Protein–RNA interactions for Protein: Q9CQS8

Sec61b, Protein transport protein Sec61 subunit beta, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61bQ9CQS8 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Sec61bQ9CQS8 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Sec61bQ9CQS8 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC8.57□□□□□ -1.04
Sec61bQ9CQS8 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC8.57□□□□□ -1.04
Sec61bQ9CQS8 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Sec61bQ9CQS8 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC8.57□□□□□ -1.04
Sec61bQ9CQS8 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC8.57□□□□□ -1.04
Sec61bQ9CQS8 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC8.57□□□□□ -1.04
Sec61bQ9CQS8 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC8.57□□□□□ -1.04
Sec61bQ9CQS8 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC8.57□□□□□ -1.04
Sec61bQ9CQS8 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Sec61bQ9CQS8 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Sec61bQ9CQS8 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Sec61bQ9CQS8 Gm7222-201ENSMUST00000117512 906 ntBASIC8.57□□□□□ -1.04
Sec61bQ9CQS8 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC8.57□□□□□ -1.04
Sec61bQ9CQS8 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC8.57□□□□□ -1.04
Sec61bQ9CQS8 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC8.57□□□□□ -1.04
Sec61bQ9CQS8 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Sec61bQ9CQS8 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC8.57□□□□□ -1.04
Sec61bQ9CQS8 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Sec61bQ9CQS8 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Sec61bQ9CQS8 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC8.57□□□□□ -1.04
Sec61bQ9CQS8 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC8.57□□□□□ -1.04
Sec61bQ9CQS8 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC8.57□□□□□ -1.04
Sec61bQ9CQS8 Gm44357-201ENSMUST00000195897 142 ntBASIC8.57□□□□□ -1.04
Sec61bQ9CQS8 Gm19658-201ENSMUST00000196231 138 ntBASIC8.57□□□□□ -1.04
Sec61bQ9CQS8 Gm44367-201ENSMUST00000196836 138 ntBASIC8.57□□□□□ -1.04
Sec61bQ9CQS8 Gm44350-201ENSMUST00000197197 138 ntBASIC8.57□□□□□ -1.04
Sec61bQ9CQS8 Gm44390-201ENSMUST00000197533 144 ntBASIC8.57□□□□□ -1.04
Sec61bQ9CQS8 Gm44313-201ENSMUST00000198018 138 ntBASIC8.57□□□□□ -1.04
Sec61bQ9CQS8 Gm44486-201ENSMUST00000198508 138 ntBASIC8.57□□□□□ -1.04
Sec61bQ9CQS8 Gm44314-201ENSMUST00000199263 138 ntBASIC8.57□□□□□ -1.04
Sec61bQ9CQS8 Gm44394-201ENSMUST00000199558 138 ntBASIC8.57□□□□□ -1.04
Sec61bQ9CQS8 Gm44484-201ENSMUST00000199873 138 ntBASIC8.57□□□□□ -1.04
Sec61bQ9CQS8 Gm44466-201ENSMUST00000200264 138 ntBASIC8.57□□□□□ -1.04
Sec61bQ9CQS8 Gm44359-201ENSMUST00000200671 138 ntBASIC8.57□□□□□ -1.04
Sec61bQ9CQS8 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC8.57□□□□□ -1.04
Sec61bQ9CQS8 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC8.57□□□□□ -1.04
Sec61bQ9CQS8 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC8.57□□□□□ -1.04
Sec61bQ9CQS8 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Sec61bQ9CQS8 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Sec61bQ9CQS8 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Sec61bQ9CQS8 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Sec61bQ9CQS8 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC8.57□□□□□ -1.04
Sec61bQ9CQS8 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC8.57□□□□□ -1.04
Sec61bQ9CQS8 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC8.57□□□□□ -1.04
Sec61bQ9CQS8 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC8.57□□□□□ -1.04
Sec61bQ9CQS8 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC8.57□□□□□ -1.04
Sec61bQ9CQS8 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Sec61bQ9CQS8 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC8.57□□□□□ -1.04
Sec61bQ9CQS8 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC8.57□□□□□ -1.04
Sec61bQ9CQS8 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Sec61bQ9CQS8 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Sec61bQ9CQS8 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Sec61bQ9CQS8 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Sec61bQ9CQS8 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC8.57□□□□□ -1.04
Sec61bQ9CQS8 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC8.57□□□□□ -1.04
Sec61bQ9CQS8 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Sec61bQ9CQS8 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC8.57□□□□□ -1.04
Sec61bQ9CQS8 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC8.57□□□□□ -1.04
Sec61bQ9CQS8 Gm9889-202ENSMUST00000206983 1577 ntBASIC8.56□□□□□ -1.04
Sec61bQ9CQS8 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC8.56□□□□□ -1.04
Sec61bQ9CQS8 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC8.56□□□□□ -1.04
Sec61bQ9CQS8 Lmo3-206ENSMUST00000163024 1331 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Sec61bQ9CQS8 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC8.56□□□□□ -1.04
Sec61bQ9CQS8 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC8.56□□□□□ -1.04
Sec61bQ9CQS8 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC8.56□□□□□ -1.04
Sec61bQ9CQS8 Sgcz-201ENSMUST00000118896 2389 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Sec61bQ9CQS8 Gm37500-201ENSMUST00000192059 1443 ntBASIC8.56□□□□□ -1.04
Sec61bQ9CQS8 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Sec61bQ9CQS8 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC8.56□□□□□ -1.04
Sec61bQ9CQS8 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Sec61bQ9CQS8 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Sec61bQ9CQS8 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Sec61bQ9CQS8 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Sec61bQ9CQS8 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC8.56□□□□□ -1.04
Sec61bQ9CQS8 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Sec61bQ9CQS8 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC8.56□□□□□ -1.04
Sec61bQ9CQS8 Gm15968-201ENSMUST00000119342 1168 ntBASIC8.56□□□□□ -1.04
Sec61bQ9CQS8 Gm12350-201ENSMUST00000121208 462 ntBASIC8.56□□□□□ -1.04
Sec61bQ9CQS8 Gm13546-201ENSMUST00000135735 401 ntTSL 5 BASIC8.56□□□□□ -1.04
Sec61bQ9CQS8 Gm23958-201ENSMUST00000157207 105 ntBASIC8.56□□□□□ -1.04
Sec61bQ9CQS8 Gm23757-201ENSMUST00000158353 100 ntBASIC8.56□□□□□ -1.04
Sec61bQ9CQS8 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Sec61bQ9CQS8 Gm36967-201ENSMUST00000193814 266 ntBASIC8.56□□□□□ -1.04
Sec61bQ9CQS8 Gm7506-201ENSMUST00000207758 815 ntBASIC8.56□□□□□ -1.04
Sec61bQ9CQS8 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC8.56□□□□□ -1.04
Sec61bQ9CQS8 AV026068-213ENSMUST00000223675 1171 ntBASIC8.56□□□□□ -1.04
Sec61bQ9CQS8 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Sec61bQ9CQS8 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Sec61bQ9CQS8 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC8.56□□□□□ -1.04
Sec61bQ9CQS8 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC8.56□□□□□ -1.04
Sec61bQ9CQS8 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC8.56□□□□□ -1.04
Sec61bQ9CQS8 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Sec61bQ9CQS8 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC8.56□□□□□ -1.04
Sec61bQ9CQS8 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Sec61bQ9CQS8 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC8.56□□□□□ -1.04
Sec61bQ9CQS8 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC8.56□□□□□ -1.04
Sec61bQ9CQS8 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Sec61bQ9CQS8 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC8.56□□□□□ -1.04
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms