Protein–RNA interactions for Protein: Q9CQE8

RTRAF, RNA transcription, translation and transport factor protein, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTRAFQ9CQE8 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
RTRAFQ9CQE8 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
RTRAFQ9CQE8 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
RTRAFQ9CQE8 App-207ENSMUST00000227737 2827 ntBASIC13.05□□□□□ -0.32
RTRAFQ9CQE8 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
RTRAFQ9CQE8 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC13.05□□□□□ -0.32
RTRAFQ9CQE8 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
RTRAFQ9CQE8 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
RTRAFQ9CQE8 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
RTRAFQ9CQE8 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC13.05□□□□□ -0.32
RTRAFQ9CQE8 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
RTRAFQ9CQE8 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
RTRAFQ9CQE8 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
RTRAFQ9CQE8 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
RTRAFQ9CQE8 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
RTRAFQ9CQE8 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
RTRAFQ9CQE8 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
RTRAFQ9CQE8 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
RTRAFQ9CQE8 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
RTRAFQ9CQE8 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
RTRAFQ9CQE8 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
RTRAFQ9CQE8 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
RTRAFQ9CQE8 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
RTRAFQ9CQE8 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
RTRAFQ9CQE8 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
RTRAFQ9CQE8 Gm15375-201ENSMUST00000119510 849 ntBASIC13.04□□□□□ -0.32
RTRAFQ9CQE8 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
RTRAFQ9CQE8 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
RTRAFQ9CQE8 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
RTRAFQ9CQE8 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
RTRAFQ9CQE8 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
RTRAFQ9CQE8 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RTRAFQ9CQE8 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
RTRAFQ9CQE8 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
RTRAFQ9CQE8 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
RTRAFQ9CQE8 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC13.03□□□□□ -0.32
RTRAFQ9CQE8 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RTRAFQ9CQE8 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
RTRAFQ9CQE8 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
RTRAFQ9CQE8 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC13.03□□□□□ -0.32
RTRAFQ9CQE8 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
RTRAFQ9CQE8 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
RTRAFQ9CQE8 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC13.03□□□□□ -0.32
RTRAFQ9CQE8 Gm42555-201ENSMUST00000199304 1039 ntBASIC13.03□□□□□ -0.32
RTRAFQ9CQE8 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
RTRAFQ9CQE8 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
RTRAFQ9CQE8 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
RTRAFQ9CQE8 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
RTRAFQ9CQE8 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
RTRAFQ9CQE8 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
RTRAFQ9CQE8 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC13.03□□□□□ -0.32
RTRAFQ9CQE8 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RTRAFQ9CQE8 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
RTRAFQ9CQE8 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
RTRAFQ9CQE8 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
RTRAFQ9CQE8 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RTRAFQ9CQE8 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
RTRAFQ9CQE8 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RTRAFQ9CQE8 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
RTRAFQ9CQE8 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RTRAFQ9CQE8 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC13.03□□□□□ -0.32
RTRAFQ9CQE8 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
RTRAFQ9CQE8 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC13.03□□□□□ -0.32
RTRAFQ9CQE8 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC13.02□□□□□ -0.32
RTRAFQ9CQE8 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
RTRAFQ9CQE8 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
RTRAFQ9CQE8 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
RTRAFQ9CQE8 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
RTRAFQ9CQE8 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
RTRAFQ9CQE8 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
RTRAFQ9CQE8 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
RTRAFQ9CQE8 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
RTRAFQ9CQE8 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC13.02□□□□□ -0.33
RTRAFQ9CQE8 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC13.02□□□□□ -0.33
RTRAFQ9CQE8 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
RTRAFQ9CQE8 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC13.02□□□□□ -0.33
RTRAFQ9CQE8 Rab3c-203ENSMUST00000224180 967 ntBASIC13.02□□□□□ -0.33
RTRAFQ9CQE8 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
RTRAFQ9CQE8 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
RTRAFQ9CQE8 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC13.02□□□□□ -0.33
RTRAFQ9CQE8 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
RTRAFQ9CQE8 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
RTRAFQ9CQE8 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
RTRAFQ9CQE8 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
RTRAFQ9CQE8 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC13.02□□□□□ -0.33
RTRAFQ9CQE8 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
RTRAFQ9CQE8 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
RTRAFQ9CQE8 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
RTRAFQ9CQE8 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
RTRAFQ9CQE8 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
RTRAFQ9CQE8 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
RTRAFQ9CQE8 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
RTRAFQ9CQE8 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
RTRAFQ9CQE8 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
RTRAFQ9CQE8 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
RTRAFQ9CQE8 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
RTRAFQ9CQE8 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
RTRAFQ9CQE8 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
RTRAFQ9CQE8 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
RTRAFQ9CQE8 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms