Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Scrt1Q99M85 Gm7230-201ENSMUST00000173026 815 ntBASIC13.99□□□□□ -0.17
Scrt1Q99M85 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC13.99□□□□□ -0.17
Scrt1Q99M85 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC13.99□□□□□ -0.17
Scrt1Q99M85 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC13.99□□□□□ -0.17
Scrt1Q99M85 AC090659.1-201ENSMUST00000224334 768 ntBASIC13.99□□□□□ -0.17
Scrt1Q99M85 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Scrt1Q99M85 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC13.99□□□□□ -0.17
Scrt1Q99M85 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Scrt1Q99M85 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Scrt1Q99M85 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Scrt1Q99M85 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Scrt1Q99M85 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Scrt1Q99M85 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Scrt1Q99M85 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Scrt1Q99M85 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Scrt1Q99M85 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Scrt1Q99M85 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Scrt1Q99M85 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Scrt1Q99M85 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Scrt1Q99M85 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC13.99□□□□□ -0.17
Scrt1Q99M85 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Scrt1Q99M85 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC13.98□□□□□ -0.17
Scrt1Q99M85 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC13.98□□□□□ -0.17
Scrt1Q99M85 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Scrt1Q99M85 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Scrt1Q99M85 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Scrt1Q99M85 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Scrt1Q99M85 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Scrt1Q99M85 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Scrt1Q99M85 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Scrt1Q99M85 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Scrt1Q99M85 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Scrt1Q99M85 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC13.98□□□□□ -0.17
Scrt1Q99M85 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC13.98□□□□□ -0.17
Scrt1Q99M85 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC13.98□□□□□ -0.17
Scrt1Q99M85 Gm44430-201ENSMUST00000203376 995 ntBASIC13.98□□□□□ -0.17
Scrt1Q99M85 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Scrt1Q99M85 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Scrt1Q99M85 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Scrt1Q99M85 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Scrt1Q99M85 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Scrt1Q99M85 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Scrt1Q99M85 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC13.98□□□□□ -0.17
Scrt1Q99M85 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Scrt1Q99M85 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Scrt1Q99M85 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Scrt1Q99M85 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Scrt1Q99M85 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Scrt1Q99M85 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Scrt1Q99M85 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Scrt1Q99M85 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Scrt1Q99M85 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Scrt1Q99M85 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Scrt1Q99M85 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Scrt1Q99M85 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Scrt1Q99M85 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC13.97□□□□□ -0.17
Scrt1Q99M85 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC13.97□□□□□ -0.17
Scrt1Q99M85 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Scrt1Q99M85 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC13.97□□□□□ -0.17
Scrt1Q99M85 Gm6089-201ENSMUST00000197666 938 ntBASIC13.97□□□□□ -0.17
Scrt1Q99M85 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Scrt1Q99M85 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC13.97□□□□□ -0.17
Scrt1Q99M85 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Scrt1Q99M85 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Scrt1Q99M85 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Scrt1Q99M85 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Scrt1Q99M85 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Scrt1Q99M85 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Scrt1Q99M85 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Scrt1Q99M85 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Scrt1Q99M85 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Scrt1Q99M85 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Scrt1Q99M85 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Scrt1Q99M85 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Scrt1Q99M85 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Scrt1Q99M85 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Scrt1Q99M85 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Scrt1Q99M85 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Scrt1Q99M85 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Scrt1Q99M85 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Scrt1Q99M85 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Scrt1Q99M85 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Scrt1Q99M85 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Scrt1Q99M85 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
Scrt1Q99M85 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC13.96□□□□□ -0.17
Scrt1Q99M85 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC13.96□□□□□ -0.17
Scrt1Q99M85 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC13.96□□□□□ -0.17
Scrt1Q99M85 Auts2-212ENSMUST00000178555 309 ntBASIC13.96□□□□□ -0.17
Scrt1Q99M85 Gm4535-201ENSMUST00000182274 558 ntBASIC13.96□□□□□ -0.17
Scrt1Q99M85 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC13.96□□□□□ -0.17
Scrt1Q99M85 Gm27628-201ENSMUST00000184911 107 ntBASIC13.96□□□□□ -0.17
Scrt1Q99M85 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC13.96□□□□□ -0.17
Scrt1Q99M85 Gm43935-201ENSMUST00000203569 1050 ntBASIC13.96□□□□□ -0.17
Scrt1Q99M85 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Scrt1Q99M85 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Scrt1Q99M85 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Scrt1Q99M85 Gm10355-201ENSMUST00000097146 517 ntBASIC13.96□□□□□ -0.17
Scrt1Q99M85 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Scrt1Q99M85 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms