Protein–RNA interactions for Protein: Q99J95

Cdk9, Cyclin-dependent kinase 9, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk9Q99J95 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC16.12■□□□□ 0.17
Cdk9Q99J95 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC16.12■□□□□ 0.17
Cdk9Q99J95 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC16.12■□□□□ 0.17
Cdk9Q99J95 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cdk9Q99J95 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cdk9Q99J95 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cdk9Q99J95 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC16.12■□□□□ 0.17
Cdk9Q99J95 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC16.12■□□□□ 0.17
Cdk9Q99J95 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cdk9Q99J95 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC16.12■□□□□ 0.17
Cdk9Q99J95 Il3ra-202ENSMUST00000223589 738 ntBASIC16.12■□□□□ 0.17
Cdk9Q99J95 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC16.12■□□□□ 0.17
Cdk9Q99J95 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Cdk9Q99J95 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cdk9Q99J95 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cdk9Q99J95 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cdk9Q99J95 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cdk9Q99J95 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Cdk9Q99J95 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cdk9Q99J95 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cdk9Q99J95 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cdk9Q99J95 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Cdk9Q99J95 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cdk9Q99J95 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cdk9Q99J95 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cdk9Q99J95 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cdk9Q99J95 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Cdk9Q99J95 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Cdk9Q99J95 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cdk9Q99J95 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cdk9Q99J95 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cdk9Q99J95 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Cdk9Q99J95 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Cdk9Q99J95 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cdk9Q99J95 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cdk9Q99J95 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
Cdk9Q99J95 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cdk9Q99J95 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC16.11■□□□□ 0.17
Cdk9Q99J95 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cdk9Q99J95 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC16.11■□□□□ 0.17
Cdk9Q99J95 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC16.11■□□□□ 0.17
Cdk9Q99J95 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Cdk9Q99J95 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cdk9Q99J95 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Cdk9Q99J95 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cdk9Q99J95 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cdk9Q99J95 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Cdk9Q99J95 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cdk9Q99J95 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cdk9Q99J95 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cdk9Q99J95 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Cdk9Q99J95 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC16.11■□□□□ 0.17
Cdk9Q99J95 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Cdk9Q99J95 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cdk9Q99J95 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cdk9Q99J95 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Cdk9Q99J95 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cdk9Q99J95 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cdk9Q99J95 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Cdk9Q99J95 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cdk9Q99J95 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cdk9Q99J95 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cdk9Q99J95 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cdk9Q99J95 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cdk9Q99J95 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cdk9Q99J95 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cdk9Q99J95 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cdk9Q99J95 Gm44443-201ENSMUST00000204396 5633 ntBASIC16.1■□□□□ 0.17
Cdk9Q99J95 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
Cdk9Q99J95 AC174678.1-201ENSMUST00000228007 2749 ntBASIC16.1■□□□□ 0.17
Cdk9Q99J95 Gm12085-201ENSMUST00000119263 940 ntBASIC16.1■□□□□ 0.17
Cdk9Q99J95 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Cdk9Q99J95 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC16.1■□□□□ 0.17
Cdk9Q99J95 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC16.1■□□□□ 0.17
Cdk9Q99J95 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC16.1■□□□□ 0.17
Cdk9Q99J95 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cdk9Q99J95 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cdk9Q99J95 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC16.1■□□□□ 0.17
Cdk9Q99J95 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC16.1■□□□□ 0.17
Cdk9Q99J95 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cdk9Q99J95 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cdk9Q99J95 Gm10676-201ENSMUST00000098778 3221 ntBASIC16.1■□□□□ 0.17
Cdk9Q99J95 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cdk9Q99J95 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC16.1■□□□□ 0.17
Cdk9Q99J95 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cdk9Q99J95 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Cdk9Q99J95 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC16.1■□□□□ 0.17
Cdk9Q99J95 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cdk9Q99J95 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cdk9Q99J95 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cdk9Q99J95 Mir1199-201ENSMUST00000117015 119 ntBASIC16.09■□□□□ 0.17
Cdk9Q99J95 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC16.09■□□□□ 0.17
Cdk9Q99J95 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cdk9Q99J95 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cdk9Q99J95 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Cdk9Q99J95 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Cdk9Q99J95 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cdk9Q99J95 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cdk9Q99J95 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Cdk9Q99J95 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms