Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
Pcdhb1Q91Y08 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhb1Q91Y08 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhb1Q91Y08 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhb1Q91Y08 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhb1Q91Y08 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhb1Q91Y08 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhb1Q91Y08 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Pcdhb1Q91Y08 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhb1Q91Y08 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC16.6■□□□□ 0.25
Pcdhb1Q91Y08 Olfr129-201ENSMUST00000122318 993 ntBASIC16.6■□□□□ 0.25
Pcdhb1Q91Y08 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
Pcdhb1Q91Y08 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhb1Q91Y08 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhb1Q91Y08 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhb1Q91Y08 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhb1Q91Y08 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhb1Q91Y08 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhb1Q91Y08 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhb1Q91Y08 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhb1Q91Y08 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhb1Q91Y08 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhb1Q91Y08 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhb1Q91Y08 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhb1Q91Y08 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
Pcdhb1Q91Y08 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhb1Q91Y08 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhb1Q91Y08 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Pcdhb1Q91Y08 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhb1Q91Y08 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhb1Q91Y08 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhb1Q91Y08 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhb1Q91Y08 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhb1Q91Y08 AC153794.1-201ENSMUST00000169148 126 ntBASIC16.59■□□□□ 0.25
Pcdhb1Q91Y08 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
Pcdhb1Q91Y08 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC16.59■□□□□ 0.25
Pcdhb1Q91Y08 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC16.59■□□□□ 0.25
Pcdhb1Q91Y08 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Pcdhb1Q91Y08 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC16.59■□□□□ 0.25
Pcdhb1Q91Y08 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhb1Q91Y08 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhb1Q91Y08 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Pcdhb1Q91Y08 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhb1Q91Y08 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhb1Q91Y08 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhb1Q91Y08 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
Pcdhb1Q91Y08 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhb1Q91Y08 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhb1Q91Y08 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Pcdhb1Q91Y08 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Pcdhb1Q91Y08 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Pcdhb1Q91Y08 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
Pcdhb1Q91Y08 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Pcdhb1Q91Y08 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC16.58■□□□□ 0.24
Pcdhb1Q91Y08 Gm1818-201ENSMUST00000169406 1184 ntBASIC16.58■□□□□ 0.24
Pcdhb1Q91Y08 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdhb1Q91Y08 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
Pcdhb1Q91Y08 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Pcdhb1Q91Y08 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdhb1Q91Y08 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdhb1Q91Y08 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC16.58■□□□□ 0.24
Pcdhb1Q91Y08 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdhb1Q91Y08 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdhb1Q91Y08 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC16.58■□□□□ 0.24
Pcdhb1Q91Y08 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdhb1Q91Y08 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdhb1Q91Y08 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdhb1Q91Y08 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdhb1Q91Y08 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdhb1Q91Y08 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdhb1Q91Y08 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdhb1Q91Y08 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdhb1Q91Y08 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC16.57■□□□□ 0.24
Pcdhb1Q91Y08 Zkscan3-208ENSMUST00000224820 5398 ntBASIC16.57■□□□□ 0.24
Pcdhb1Q91Y08 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhb1Q91Y08 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Pcdhb1Q91Y08 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC16.57■□□□□ 0.24
Pcdhb1Q91Y08 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC16.57■□□□□ 0.24
Pcdhb1Q91Y08 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhb1Q91Y08 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhb1Q91Y08 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhb1Q91Y08 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhb1Q91Y08 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhb1Q91Y08 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhb1Q91Y08 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhb1Q91Y08 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC16.57■□□□□ 0.24
Pcdhb1Q91Y08 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC16.57■□□□□ 0.24
Pcdhb1Q91Y08 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhb1Q91Y08 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhb1Q91Y08 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhb1Q91Y08 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC16.57■□□□□ 0.24
Pcdhb1Q91Y08 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC16.57■□□□□ 0.24
Pcdhb1Q91Y08 AC154471.1-201ENSMUST00000224418 436 ntBASIC16.57■□□□□ 0.24
Pcdhb1Q91Y08 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhb1Q91Y08 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhb1Q91Y08 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhb1Q91Y08 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhb1Q91Y08 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC16.57■□□□□ 0.24
Pcdhb1Q91Y08 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhb1Q91Y08 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms