Protein–RNA interactions for Protein: Q91XB0

Trex1, Three-prime repair exonuclease 1, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trex1Q91XB0 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC18.26■□□□□ 0.51
Trex1Q91XB0 AC131709.1-201ENSMUST00000224731 1180 ntBASIC18.26■□□□□ 0.51
Trex1Q91XB0 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trex1Q91XB0 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trex1Q91XB0 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trex1Q91XB0 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trex1Q91XB0 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trex1Q91XB0 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trex1Q91XB0 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trex1Q91XB0 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trex1Q91XB0 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trex1Q91XB0 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trex1Q91XB0 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trex1Q91XB0 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trex1Q91XB0 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trex1Q91XB0 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trex1Q91XB0 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trex1Q91XB0 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Trex1Q91XB0 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trex1Q91XB0 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trex1Q91XB0 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trex1Q91XB0 Gm26596-201ENSMUST00000180464 2655 ntBASIC18.25■□□□□ 0.51
Trex1Q91XB0 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Trex1Q91XB0 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Trex1Q91XB0 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trex1Q91XB0 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC18.25■□□□□ 0.51
Trex1Q91XB0 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC18.25■□□□□ 0.51
Trex1Q91XB0 Gm6257-201ENSMUST00000163864 910 ntBASIC18.25■□□□□ 0.51
Trex1Q91XB0 Mir3113-201ENSMUST00000175478 76 ntBASIC18.25■□□□□ 0.51
Trex1Q91XB0 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC18.25■□□□□ 0.51
Trex1Q91XB0 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trex1Q91XB0 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Trex1Q91XB0 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trex1Q91XB0 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trex1Q91XB0 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Trex1Q91XB0 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trex1Q91XB0 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Trex1Q91XB0 AC121598.2-201ENSMUST00000228376 2325 ntBASIC18.24■□□□□ 0.51
Trex1Q91XB0 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trex1Q91XB0 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC18.24■□□□□ 0.51
Trex1Q91XB0 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Trex1Q91XB0 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trex1Q91XB0 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Trex1Q91XB0 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trex1Q91XB0 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Trex1Q91XB0 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC18.24■□□□□ 0.51
Trex1Q91XB0 Gm11185-201ENSMUST00000117732 1007 ntBASIC18.24■□□□□ 0.51
Trex1Q91XB0 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC18.24■□□□□ 0.51
Trex1Q91XB0 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Trex1Q91XB0 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trex1Q91XB0 Gm27300-201ENSMUST00000184085 97 ntBASIC18.24■□□□□ 0.51
Trex1Q91XB0 Gm27335-201ENSMUST00000184758 97 ntBASIC18.24■□□□□ 0.51
Trex1Q91XB0 AC147366.1-201ENSMUST00000227671 852 ntBASIC18.24■□□□□ 0.51
Trex1Q91XB0 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trex1Q91XB0 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trex1Q91XB0 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Trex1Q91XB0 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Trex1Q91XB0 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trex1Q91XB0 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trex1Q91XB0 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trex1Q91XB0 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Trex1Q91XB0 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trex1Q91XB0 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trex1Q91XB0 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Trex1Q91XB0 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trex1Q91XB0 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trex1Q91XB0 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trex1Q91XB0 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Trex1Q91XB0 AC174742.1-201ENSMUST00000218272 304 ntBASIC18.23■□□□□ 0.51
Trex1Q91XB0 Bloc1s5-203ENSMUST00000224902 612 ntBASIC18.23■□□□□ 0.51
Trex1Q91XB0 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trex1Q91XB0 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Trex1Q91XB0 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Trex1Q91XB0 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trex1Q91XB0 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC18.23■□□□□ 0.51
Trex1Q91XB0 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trex1Q91XB0 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Trex1Q91XB0 Grk6-207ENSMUST00000225925 2769 ntBASIC18.23■□□□□ 0.51
Trex1Q91XB0 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Trex1Q91XB0 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC18.23■□□□□ 0.51
Trex1Q91XB0 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trex1Q91XB0 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trex1Q91XB0 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trex1Q91XB0 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC18.22■□□□□ 0.51
Trex1Q91XB0 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC18.22■□□□□ 0.51
Trex1Q91XB0 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC18.22■□□□□ 0.51
Trex1Q91XB0 Mir8117-201ENSMUST00000184773 107 ntBASIC18.22■□□□□ 0.51
Trex1Q91XB0 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Trex1Q91XB0 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Trex1Q91XB0 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trex1Q91XB0 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trex1Q91XB0 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trex1Q91XB0 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trex1Q91XB0 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trex1Q91XB0 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trex1Q91XB0 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trex1Q91XB0 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Trex1Q91XB0 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Trex1Q91XB0 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trex1Q91XB0 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC18.22■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms