Protein–RNA interactions for Protein: Q8VDF2

Uhrf1, E3 ubiquitin-protein ligase UHRF1, mousemouse

Known RBP Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uhrf1Q8VDF2 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Uhrf1Q8VDF2 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Uhrf1Q8VDF2 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC16.42■□□□□ 0.22
Uhrf1Q8VDF2 AC122335.2-201ENSMUST00000213901 6181 ntBASIC16.42■□□□□ 0.22
Uhrf1Q8VDF2 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Uhrf1Q8VDF2 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Uhrf1Q8VDF2 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Uhrf1Q8VDF2 Gm14057-201ENSMUST00000120631 482 ntBASIC16.42■□□□□ 0.22
Uhrf1Q8VDF2 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC16.42■□□□□ 0.22
Uhrf1Q8VDF2 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC16.42■□□□□ 0.22
Uhrf1Q8VDF2 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC16.42■□□□□ 0.22
Uhrf1Q8VDF2 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Uhrf1Q8VDF2 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Uhrf1Q8VDF2 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Uhrf1Q8VDF2 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Uhrf1Q8VDF2 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Uhrf1Q8VDF2 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Uhrf1Q8VDF2 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Uhrf1Q8VDF2 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Uhrf1Q8VDF2 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Uhrf1Q8VDF2 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Uhrf1Q8VDF2 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Uhrf1Q8VDF2 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
Uhrf1Q8VDF2 Gm16401-202ENSMUST00000197463 2074 ntBASIC16.41■□□□□ 0.22
Uhrf1Q8VDF2 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Uhrf1Q8VDF2 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Uhrf1Q8VDF2 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Uhrf1Q8VDF2 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Uhrf1Q8VDF2 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Uhrf1Q8VDF2 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Uhrf1Q8VDF2 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Uhrf1Q8VDF2 AC151836.1-202ENSMUST00000226259 753 ntBASIC16.41■□□□□ 0.22
Uhrf1Q8VDF2 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Uhrf1Q8VDF2 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Uhrf1Q8VDF2 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Uhrf1Q8VDF2 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Uhrf1Q8VDF2 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Uhrf1Q8VDF2 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Uhrf1Q8VDF2 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Uhrf1Q8VDF2 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Uhrf1Q8VDF2 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Uhrf1Q8VDF2 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC16.4■□□□□ 0.22
Uhrf1Q8VDF2 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Uhrf1Q8VDF2 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Uhrf1Q8VDF2 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Uhrf1Q8VDF2 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Uhrf1Q8VDF2 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Uhrf1Q8VDF2 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
Uhrf1Q8VDF2 Mir1895-201ENSMUST00000122615 79 ntBASIC16.4■□□□□ 0.22
Uhrf1Q8VDF2 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Uhrf1Q8VDF2 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Uhrf1Q8VDF2 Gm27494-201ENSMUST00000184735 189 ntBASIC16.4■□□□□ 0.22
Uhrf1Q8VDF2 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC16.4■□□□□ 0.22
Uhrf1Q8VDF2 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC16.4■□□□□ 0.22
Uhrf1Q8VDF2 AC159114.1-201ENSMUST00000220349 266 ntBASIC16.4■□□□□ 0.22
Uhrf1Q8VDF2 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC16.4■□□□□ 0.22
Uhrf1Q8VDF2 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Uhrf1Q8VDF2 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Uhrf1Q8VDF2 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Uhrf1Q8VDF2 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
Uhrf1Q8VDF2 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Uhrf1Q8VDF2 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Uhrf1Q8VDF2 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Uhrf1Q8VDF2 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Uhrf1Q8VDF2 Gm36858-201ENSMUST00000194501 2391 ntBASIC16.4■□□□□ 0.22
Uhrf1Q8VDF2 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Uhrf1Q8VDF2 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Uhrf1Q8VDF2 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC16.39■□□□□ 0.22
Uhrf1Q8VDF2 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Uhrf1Q8VDF2 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Uhrf1Q8VDF2 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Uhrf1Q8VDF2 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC16.39■□□□□ 0.21
Uhrf1Q8VDF2 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Uhrf1Q8VDF2 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC16.39■□□□□ 0.21
Uhrf1Q8VDF2 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Uhrf1Q8VDF2 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Uhrf1Q8VDF2 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Uhrf1Q8VDF2 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
Uhrf1Q8VDF2 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Uhrf1Q8VDF2 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC16.39■□□□□ 0.21
Uhrf1Q8VDF2 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC16.39■□□□□ 0.21
Uhrf1Q8VDF2 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC16.39■□□□□ 0.21
Uhrf1Q8VDF2 Gm37171-201ENSMUST00000192636 1185 ntBASIC16.39■□□□□ 0.21
Uhrf1Q8VDF2 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC16.39■□□□□ 0.21
Uhrf1Q8VDF2 Gm19164-201ENSMUST00000210667 640 ntBASIC16.39■□□□□ 0.21
Uhrf1Q8VDF2 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Uhrf1Q8VDF2 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Uhrf1Q8VDF2 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Uhrf1Q8VDF2 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Uhrf1Q8VDF2 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Uhrf1Q8VDF2 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Uhrf1Q8VDF2 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Uhrf1Q8VDF2 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC16.39■□□□□ 0.21
Uhrf1Q8VDF2 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Uhrf1Q8VDF2 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Uhrf1Q8VDF2 Gm5366-201ENSMUST00000215494 1338 ntBASIC16.39■□□□□ 0.21
Uhrf1Q8VDF2 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC16.39■□□□□ 0.21
Uhrf1Q8VDF2 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Uhrf1Q8VDF2 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Uhrf1Q8VDF2 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms