Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Lsm1Q8VC85 Gm7729-201ENSMUST00000050143 801 ntBASIC15.34■□□□□ 0.05
Lsm1Q8VC85 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Lsm1Q8VC85 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Lsm1Q8VC85 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Lsm1Q8VC85 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Lsm1Q8VC85 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Lsm1Q8VC85 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
Lsm1Q8VC85 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Lsm1Q8VC85 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Lsm1Q8VC85 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Lsm1Q8VC85 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Lsm1Q8VC85 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Lsm1Q8VC85 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Lsm1Q8VC85 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC15.33■□□□□ 0.05
Lsm1Q8VC85 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Lsm1Q8VC85 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Lsm1Q8VC85 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Lsm1Q8VC85 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Lsm1Q8VC85 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Lsm1Q8VC85 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Lsm1Q8VC85 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Lsm1Q8VC85 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Lsm1Q8VC85 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Lsm1Q8VC85 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Lsm1Q8VC85 Gm11860-201ENSMUST00000122346 1010 ntBASIC15.33■□□□□ 0.04
Lsm1Q8VC85 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Lsm1Q8VC85 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Lsm1Q8VC85 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Lsm1Q8VC85 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Lsm1Q8VC85 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC15.33■□□□□ 0.04
Lsm1Q8VC85 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Lsm1Q8VC85 Gm18032-201ENSMUST00000222541 538 ntBASIC15.33■□□□□ 0.04
Lsm1Q8VC85 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Lsm1Q8VC85 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Lsm1Q8VC85 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Lsm1Q8VC85 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Lsm1Q8VC85 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Lsm1Q8VC85 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC15.33■□□□□ 0.04
Lsm1Q8VC85 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Lsm1Q8VC85 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Lsm1Q8VC85 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Lsm1Q8VC85 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Lsm1Q8VC85 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Lsm1Q8VC85 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Lsm1Q8VC85 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Lsm1Q8VC85 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Lsm1Q8VC85 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Lsm1Q8VC85 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC15.32■□□□□ 0.04
Lsm1Q8VC85 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Lsm1Q8VC85 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Lsm1Q8VC85 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Lsm1Q8VC85 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Lsm1Q8VC85 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Lsm1Q8VC85 Asic1-205ENSMUST00000228185 1818 ntBASIC15.32■□□□□ 0.04
Lsm1Q8VC85 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC15.32■□□□□ 0.04
Lsm1Q8VC85 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Lsm1Q8VC85 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC15.32■□□□□ 0.04
Lsm1Q8VC85 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Lsm1Q8VC85 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Lsm1Q8VC85 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Lsm1Q8VC85 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC15.32■□□□□ 0.04
Lsm1Q8VC85 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Lsm1Q8VC85 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC15.32■□□□□ 0.04
Lsm1Q8VC85 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC15.32■□□□□ 0.04
Lsm1Q8VC85 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC15.32■□□□□ 0.04
Lsm1Q8VC85 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Lsm1Q8VC85 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC15.32■□□□□ 0.04
Lsm1Q8VC85 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Lsm1Q8VC85 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Lsm1Q8VC85 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Lsm1Q8VC85 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Lsm1Q8VC85 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Lsm1Q8VC85 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Lsm1Q8VC85 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Lsm1Q8VC85 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Lsm1Q8VC85 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Lsm1Q8VC85 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC15.31■□□□□ 0.04
Lsm1Q8VC85 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Lsm1Q8VC85 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC15.31■□□□□ 0.04
Lsm1Q8VC85 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Lsm1Q8VC85 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Lsm1Q8VC85 Gm10252-201ENSMUST00000209541 832 ntBASIC15.31■□□□□ 0.04
Lsm1Q8VC85 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Lsm1Q8VC85 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
Lsm1Q8VC85 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Lsm1Q8VC85 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Lsm1Q8VC85 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Lsm1Q8VC85 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Lsm1Q8VC85 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Lsm1Q8VC85 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC15.31■□□□□ 0.04
Lsm1Q8VC85 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Lsm1Q8VC85 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Lsm1Q8VC85 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC15.31■□□□□ 0.04
Lsm1Q8VC85 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Lsm1Q8VC85 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC15.31■□□□□ 0.04
Lsm1Q8VC85 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Lsm1Q8VC85 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Lsm1Q8VC85 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Lsm1Q8VC85 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms