Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 AC093043.3-201ENSMUST00000226531 2273 ntBASIC16.03■□□□□ 0.16
Vps39Q8R5L3 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC16.03■□□□□ 0.16
Vps39Q8R5L3 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Vps39Q8R5L3 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Vps39Q8R5L3 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Vps39Q8R5L3 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC16.03■□□□□ 0.16
Vps39Q8R5L3 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Vps39Q8R5L3 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Vps39Q8R5L3 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Vps39Q8R5L3 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Vps39Q8R5L3 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Vps39Q8R5L3 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
Vps39Q8R5L3 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Vps39Q8R5L3 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Vps39Q8R5L3 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Vps39Q8R5L3 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
Vps39Q8R5L3 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Vps39Q8R5L3 Gm10013-201ENSMUST00000106074 672 ntBASIC16.02■□□□□ 0.16
Vps39Q8R5L3 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC16.02■□□□□ 0.16
Vps39Q8R5L3 Gm44430-201ENSMUST00000203376 995 ntBASIC16.02■□□□□ 0.16
Vps39Q8R5L3 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Vps39Q8R5L3 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Vps39Q8R5L3 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC16.02■□□□□ 0.16
Vps39Q8R5L3 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC16.02■□□□□ 0.16
Vps39Q8R5L3 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
Vps39Q8R5L3 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Vps39Q8R5L3 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Vps39Q8R5L3 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC16.02■□□□□ 0.15
Vps39Q8R5L3 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Vps39Q8R5L3 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Vps39Q8R5L3 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Vps39Q8R5L3 AC153526.5-201ENSMUST00000218661 2147 ntBASIC16.01■□□□□ 0.15
Vps39Q8R5L3 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Vps39Q8R5L3 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Vps39Q8R5L3 Gm42473-201ENSMUST00000201056 2291 ntBASIC16.01■□□□□ 0.15
Vps39Q8R5L3 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Vps39Q8R5L3 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Vps39Q8R5L3 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Vps39Q8R5L3 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Vps39Q8R5L3 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Vps39Q8R5L3 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Vps39Q8R5L3 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC16.01■□□□□ 0.15
Vps39Q8R5L3 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Vps39Q8R5L3 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC16.01■□□□□ 0.15
Vps39Q8R5L3 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
Vps39Q8R5L3 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC16.01■□□□□ 0.15
Vps39Q8R5L3 Krtap5-1-202ENSMUST00000188274 742 ntBASIC16.01■□□□□ 0.15
Vps39Q8R5L3 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Vps39Q8R5L3 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Vps39Q8R5L3 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Vps39Q8R5L3 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC16.01■□□□□ 0.15
Vps39Q8R5L3 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Vps39Q8R5L3 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Vps39Q8R5L3 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Vps39Q8R5L3 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Vps39Q8R5L3 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Vps39Q8R5L3 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Vps39Q8R5L3 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Vps39Q8R5L3 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC16.01■□□□□ 0.15
Vps39Q8R5L3 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Vps39Q8R5L3 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Vps39Q8R5L3 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC16.01■□□□□ 0.15
Vps39Q8R5L3 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Vps39Q8R5L3 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Vps39Q8R5L3 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Vps39Q8R5L3 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
Vps39Q8R5L3 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Vps39Q8R5L3 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Vps39Q8R5L3 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Vps39Q8R5L3 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Vps39Q8R5L3 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Vps39Q8R5L3 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Vps39Q8R5L3 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC16■□□□□ 0.15
Vps39Q8R5L3 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC16■□□□□ 0.15
Vps39Q8R5L3 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Vps39Q8R5L3 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
Vps39Q8R5L3 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC16■□□□□ 0.15
Vps39Q8R5L3 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC16■□□□□ 0.15
Vps39Q8R5L3 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC16■□□□□ 0.15
Vps39Q8R5L3 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC16■□□□□ 0.15
Vps39Q8R5L3 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC16■□□□□ 0.15
Vps39Q8R5L3 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Vps39Q8R5L3 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Vps39Q8R5L3 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Vps39Q8R5L3 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC16■□□□□ 0.15
Vps39Q8R5L3 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Vps39Q8R5L3 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Vps39Q8R5L3 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Vps39Q8R5L3 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Vps39Q8R5L3 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Vps39Q8R5L3 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
Vps39Q8R5L3 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC15.99■□□□□ 0.15
Vps39Q8R5L3 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Vps39Q8R5L3 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Vps39Q8R5L3 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
Vps39Q8R5L3 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Vps39Q8R5L3 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Vps39Q8R5L3 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Vps39Q8R5L3 Gm11860-201ENSMUST00000122346 1010 ntBASIC15.99■□□□□ 0.15
Vps39Q8R5L3 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms