Protein–RNA interactions for Protein: Q8R422

Cd109, CD109 antigen, mousemouse

Predictions only

Length 1,442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd109Q8R422 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Cd109Q8R422 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Cd109Q8R422 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC22.5■■□□□ 1.19
Cd109Q8R422 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Cd109Q8R422 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Cd109Q8R422 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC22.5■■□□□ 1.19
Cd109Q8R422 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Cd109Q8R422 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Cd109Q8R422 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Cd109Q8R422 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Cd109Q8R422 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Cd109Q8R422 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC22.49■■□□□ 1.19
Cd109Q8R422 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC22.49■■□□□ 1.19
Cd109Q8R422 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC22.49■■□□□ 1.19
Cd109Q8R422 Gm17271-201ENSMUST00000165535 355 ntBASIC22.49■■□□□ 1.19
Cd109Q8R422 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Cd109Q8R422 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC22.49■■□□□ 1.19
Cd109Q8R422 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
Cd109Q8R422 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Cd109Q8R422 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC22.49■■□□□ 1.19
Cd109Q8R422 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
Cd109Q8R422 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Cd109Q8R422 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Cd109Q8R422 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC22.49■■□□□ 1.19
Cd109Q8R422 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC22.49■■□□□ 1.19
Cd109Q8R422 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Cd109Q8R422 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Cd109Q8R422 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Cd109Q8R422 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
Cd109Q8R422 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC22.48■■□□□ 1.19
Cd109Q8R422 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC22.48■■□□□ 1.19
Cd109Q8R422 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC22.48■■□□□ 1.19
Cd109Q8R422 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Cd109Q8R422 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC22.48■■□□□ 1.19
Cd109Q8R422 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Cd109Q8R422 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Cd109Q8R422 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Cd109Q8R422 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC22.48■■□□□ 1.19
Cd109Q8R422 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC22.48■■□□□ 1.19
Cd109Q8R422 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC22.48■■□□□ 1.19
Cd109Q8R422 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC22.48■■□□□ 1.19
Cd109Q8R422 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Cd109Q8R422 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
Cd109Q8R422 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Cd109Q8R422 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC22.48■■□□□ 1.19
Cd109Q8R422 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Cd109Q8R422 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Cd109Q8R422 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Cd109Q8R422 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC22.48■■□□□ 1.19
Cd109Q8R422 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Cd109Q8R422 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC22.48■■□□□ 1.19
Cd109Q8R422 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Cd109Q8R422 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC22.47■■□□□ 1.19
Cd109Q8R422 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC22.47■■□□□ 1.19
Cd109Q8R422 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Cd109Q8R422 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Cd109Q8R422 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Cd109Q8R422 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC22.47■■□□□ 1.19
Cd109Q8R422 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Cd109Q8R422 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC22.47■■□□□ 1.19
Cd109Q8R422 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Cd109Q8R422 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Cd109Q8R422 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Cd109Q8R422 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Cd109Q8R422 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Cd109Q8R422 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Cd109Q8R422 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Cd109Q8R422 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC22.46■■□□□ 1.19
Cd109Q8R422 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Cd109Q8R422 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Cd109Q8R422 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC22.46■■□□□ 1.19
Cd109Q8R422 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Cd109Q8R422 Gm12892-201ENSMUST00000117367 1146 ntBASIC22.46■■□□□ 1.19
Cd109Q8R422 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC22.46■■□□□ 1.19
Cd109Q8R422 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC22.46■■□□□ 1.19
Cd109Q8R422 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Cd109Q8R422 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Cd109Q8R422 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Cd109Q8R422 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Cd109Q8R422 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC22.45■■□□□ 1.18
Cd109Q8R422 Gm15427-201ENSMUST00000117288 531 ntBASIC22.45■■□□□ 1.18
Cd109Q8R422 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC22.45■■□□□ 1.18
Cd109Q8R422 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC22.45■■□□□ 1.18
Cd109Q8R422 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC22.45■■□□□ 1.18
Cd109Q8R422 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC22.45■■□□□ 1.18
Cd109Q8R422 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Cd109Q8R422 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Cd109Q8R422 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Cd109Q8R422 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC22.44■■□□□ 1.18
Cd109Q8R422 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Cd109Q8R422 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC22.44■■□□□ 1.18
Cd109Q8R422 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Cd109Q8R422 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Cd109Q8R422 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Cd109Q8R422 Gm7286-201ENSMUST00000182691 1007 ntBASIC22.44■■□□□ 1.18
Cd109Q8R422 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Cd109Q8R422 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Cd109Q8R422 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Cd109Q8R422 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Cd109Q8R422 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC22.44■■□□□ 1.18
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms