Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Gm25349-201ENSMUST00000177728 110 ntBASIC20.85■□□□□ 0.93
Ddx54Q8K4L0 Gm23616-201ENSMUST00000177797 110 ntBASIC20.85■□□□□ 0.93
Ddx54Q8K4L0 Gm25871-201ENSMUST00000177816 110 ntBASIC20.85■□□□□ 0.93
Ddx54Q8K4L0 Gm24752-201ENSMUST00000178240 110 ntBASIC20.85■□□□□ 0.93
Ddx54Q8K4L0 Gm24496-201ENSMUST00000178287 110 ntBASIC20.85■□□□□ 0.93
Ddx54Q8K4L0 Gm25649-201ENSMUST00000178476 110 ntBASIC20.85■□□□□ 0.93
Ddx54Q8K4L0 Gm25548-201ENSMUST00000178681 110 ntBASIC20.85■□□□□ 0.93
Ddx54Q8K4L0 Gm23147-201ENSMUST00000178841 110 ntBASIC20.85■□□□□ 0.93
Ddx54Q8K4L0 Gm26095-201ENSMUST00000179270 110 ntBASIC20.85■□□□□ 0.93
Ddx54Q8K4L0 Gm22171-201ENSMUST00000179283 110 ntBASIC20.85■□□□□ 0.93
Ddx54Q8K4L0 Gm23936-201ENSMUST00000179354 110 ntBASIC20.85■□□□□ 0.93
Ddx54Q8K4L0 Gm22619-201ENSMUST00000179516 110 ntBASIC20.85■□□□□ 0.93
Ddx54Q8K4L0 Gm25255-201ENSMUST00000179579 110 ntBASIC20.85■□□□□ 0.93
Ddx54Q8K4L0 Gm24755-201ENSMUST00000179691 110 ntBASIC20.85■□□□□ 0.93
Ddx54Q8K4L0 Gm26506-201ENSMUST00000179692 110 ntBASIC20.85■□□□□ 0.93
Ddx54Q8K4L0 Gm25086-201ENSMUST00000179931 110 ntBASIC20.85■□□□□ 0.93
Ddx54Q8K4L0 Gm23243-201ENSMUST00000180047 110 ntBASIC20.85■□□□□ 0.93
Ddx54Q8K4L0 Gm24659-201ENSMUST00000180212 110 ntBASIC20.85■□□□□ 0.93
Ddx54Q8K4L0 Gm24169-201ENSMUST00000180244 110 ntBASIC20.85■□□□□ 0.93
Ddx54Q8K4L0 Gm23689-201ENSMUST00000180354 110 ntBASIC20.85■□□□□ 0.93
Ddx54Q8K4L0 Gm27359-201ENSMUST00000184153 110 ntBASIC20.85■□□□□ 0.93
Ddx54Q8K4L0 Gm27785-201ENSMUST00000184268 110 ntBASIC20.85■□□□□ 0.93
Ddx54Q8K4L0 Gm27466-201ENSMUST00000184396 110 ntBASIC20.85■□□□□ 0.93
Ddx54Q8K4L0 Gm27703-201ENSMUST00000184836 110 ntBASIC20.85■□□□□ 0.93
Ddx54Q8K4L0 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC20.85■□□□□ 0.93
Ddx54Q8K4L0 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC20.85■□□□□ 0.93
Ddx54Q8K4L0 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ddx54Q8K4L0 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Ddx54Q8K4L0 AC122024.2-201ENSMUST00000220086 871 ntBASIC20.85■□□□□ 0.93
Ddx54Q8K4L0 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ddx54Q8K4L0 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Ddx54Q8K4L0 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ddx54Q8K4L0 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC20.85■□□□□ 0.93
Ddx54Q8K4L0 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ddx54Q8K4L0 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
Ddx54Q8K4L0 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ddx54Q8K4L0 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ddx54Q8K4L0 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ddx54Q8K4L0 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ddx54Q8K4L0 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ddx54Q8K4L0 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Ddx54Q8K4L0 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ddx54Q8K4L0 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ddx54Q8K4L0 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ddx54Q8K4L0 Gm7336-201ENSMUST00000107041 1232 ntBASIC20.84■□□□□ 0.93
Ddx54Q8K4L0 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ddx54Q8K4L0 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Ddx54Q8K4L0 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
Ddx54Q8K4L0 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC20.84■□□□□ 0.93
Ddx54Q8K4L0 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC20.84■□□□□ 0.93
Ddx54Q8K4L0 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ddx54Q8K4L0 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ddx54Q8K4L0 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC20.84■□□□□ 0.93
Ddx54Q8K4L0 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Ddx54Q8K4L0 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Ddx54Q8K4L0 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ddx54Q8K4L0 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ddx54Q8K4L0 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Ddx54Q8K4L0 Gm9385-201ENSMUST00000117563 472 ntBASIC20.83■□□□□ 0.93
Ddx54Q8K4L0 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
Ddx54Q8K4L0 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC20.83■□□□□ 0.93
Ddx54Q8K4L0 Gtpbp10-211ENSMUST00000198799 648 ntBASIC20.83■□□□□ 0.93
Ddx54Q8K4L0 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC20.83■□□□□ 0.93
Ddx54Q8K4L0 Gm5779-201ENSMUST00000218467 910 ntBASIC20.83■□□□□ 0.93
Ddx54Q8K4L0 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ddx54Q8K4L0 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Ddx54Q8K4L0 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Ddx54Q8K4L0 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Ddx54Q8K4L0 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Ddx54Q8K4L0 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
Ddx54Q8K4L0 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Ddx54Q8K4L0 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ddx54Q8K4L0 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ddx54Q8K4L0 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Ddx54Q8K4L0 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Ddx54Q8K4L0 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ddx54Q8K4L0 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ddx54Q8K4L0 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Ddx54Q8K4L0 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Ddx54Q8K4L0 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC20.82■□□□□ 0.92
Ddx54Q8K4L0 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Ddx54Q8K4L0 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ddx54Q8K4L0 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC20.82■□□□□ 0.92
Ddx54Q8K4L0 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ddx54Q8K4L0 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ddx54Q8K4L0 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC20.82■□□□□ 0.92
Ddx54Q8K4L0 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ddx54Q8K4L0 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ddx54Q8K4L0 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC20.81■□□□□ 0.92
Ddx54Q8K4L0 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Ddx54Q8K4L0 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Ddx54Q8K4L0 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ddx54Q8K4L0 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ddx54Q8K4L0 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ddx54Q8K4L0 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ddx54Q8K4L0 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ddx54Q8K4L0 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Ddx54Q8K4L0 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ddx54Q8K4L0 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
Ddx54Q8K4L0 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms