Protein–RNA interactions for Protein: Q8K4E0

Alms1, Alstrom syndrome protein 1 homolog, mousemouse

Predictions only

Length 3,251 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alms1Q8K4E0 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Alms1Q8K4E0 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Alms1Q8K4E0 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC15.57■□□□□ 0.08
Alms1Q8K4E0 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Alms1Q8K4E0 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC15.57■□□□□ 0.08
Alms1Q8K4E0 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Alms1Q8K4E0 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC15.57■□□□□ 0.08
Alms1Q8K4E0 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Alms1Q8K4E0 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC15.57■□□□□ 0.08
Alms1Q8K4E0 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC15.57■□□□□ 0.08
Alms1Q8K4E0 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Alms1Q8K4E0 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Alms1Q8K4E0 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Alms1Q8K4E0 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Alms1Q8K4E0 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Alms1Q8K4E0 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Alms1Q8K4E0 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Alms1Q8K4E0 AC139382.1-201ENSMUST00000221402 498 ntBASIC15.57■□□□□ 0.08
Alms1Q8K4E0 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Alms1Q8K4E0 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Alms1Q8K4E0 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Alms1Q8K4E0 Gm11873-201ENSMUST00000117877 1304 ntBASIC15.57■□□□□ 0.08
Alms1Q8K4E0 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC15.56■□□□□ 0.08
Alms1Q8K4E0 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Alms1Q8K4E0 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC15.56■□□□□ 0.08
Alms1Q8K4E0 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Alms1Q8K4E0 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Alms1Q8K4E0 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC15.56■□□□□ 0.08
Alms1Q8K4E0 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Alms1Q8K4E0 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Alms1Q8K4E0 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC15.56■□□□□ 0.08
Alms1Q8K4E0 AC147366.1-201ENSMUST00000227671 852 ntBASIC15.56■□□□□ 0.08
Alms1Q8K4E0 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Alms1Q8K4E0 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Alms1Q8K4E0 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Alms1Q8K4E0 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Alms1Q8K4E0 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Alms1Q8K4E0 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Alms1Q8K4E0 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Alms1Q8K4E0 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Alms1Q8K4E0 Gm2308-201ENSMUST00000166539 1004 ntBASIC15.56■□□□□ 0.08
Alms1Q8K4E0 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC15.56■□□□□ 0.08
Alms1Q8K4E0 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Alms1Q8K4E0 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Alms1Q8K4E0 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Alms1Q8K4E0 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Alms1Q8K4E0 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Alms1Q8K4E0 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Alms1Q8K4E0 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Alms1Q8K4E0 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Alms1Q8K4E0 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC15.55■□□□□ 0.08
Alms1Q8K4E0 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Alms1Q8K4E0 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC15.55■□□□□ 0.08
Alms1Q8K4E0 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Alms1Q8K4E0 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Alms1Q8K4E0 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC15.55■□□□□ 0.08
Alms1Q8K4E0 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Alms1Q8K4E0 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Alms1Q8K4E0 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Alms1Q8K4E0 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Alms1Q8K4E0 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Alms1Q8K4E0 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Alms1Q8K4E0 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC15.55■□□□□ 0.08
Alms1Q8K4E0 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC15.55■□□□□ 0.08
Alms1Q8K4E0 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Alms1Q8K4E0 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Alms1Q8K4E0 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Alms1Q8K4E0 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Alms1Q8K4E0 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Alms1Q8K4E0 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Alms1Q8K4E0 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Alms1Q8K4E0 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
Alms1Q8K4E0 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Alms1Q8K4E0 Gm20949-201ENSMUST00000206478 952 ntBASIC15.55■□□□□ 0.08
Alms1Q8K4E0 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Alms1Q8K4E0 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Alms1Q8K4E0 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Alms1Q8K4E0 Gm43548-201ENSMUST00000197139 2353 ntBASIC15.54■□□□□ 0.08
Alms1Q8K4E0 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Alms1Q8K4E0 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC15.54■□□□□ 0.08
Alms1Q8K4E0 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Alms1Q8K4E0 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Alms1Q8K4E0 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Alms1Q8K4E0 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Alms1Q8K4E0 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Alms1Q8K4E0 AC154572.2-201ENSMUST00000225105 997 ntBASIC15.54■□□□□ 0.08
Alms1Q8K4E0 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Alms1Q8K4E0 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC15.54■□□□□ 0.08
Alms1Q8K4E0 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Alms1Q8K4E0 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Alms1Q8K4E0 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Alms1Q8K4E0 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC15.54■□□□□ 0.08
Alms1Q8K4E0 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Alms1Q8K4E0 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Alms1Q8K4E0 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC15.54■□□□□ 0.08
Alms1Q8K4E0 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Alms1Q8K4E0 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Alms1Q8K4E0 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Alms1Q8K4E0 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Alms1Q8K4E0 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms