Protein–RNA interactions for Protein: Q8K353

Cystm1, Cysteine-rich and transmembrane domain-containing protein 1, mousemouse

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cystm1Q8K353 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
Cystm1Q8K353 Gm37691-201ENSMUST00000192147 2573 ntBASIC10.07□□□□□ -0.8
Cystm1Q8K353 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Cystm1Q8K353 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
Cystm1Q8K353 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Cystm1Q8K353 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Cystm1Q8K353 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Cystm1Q8K353 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Cystm1Q8K353 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Cystm1Q8K353 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Cystm1Q8K353 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Cystm1Q8K353 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC10.06□□□□□ -0.8
Cystm1Q8K353 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Cystm1Q8K353 Ntrk2-208ENSMUST00000225583 2719 ntBASIC10.06□□□□□ -0.8
Cystm1Q8K353 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC10.06□□□□□ -0.8
Cystm1Q8K353 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Cystm1Q8K353 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Cystm1Q8K353 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Cystm1Q8K353 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Cystm1Q8K353 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Cystm1Q8K353 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
Cystm1Q8K353 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Cystm1Q8K353 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Cystm1Q8K353 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Cystm1Q8K353 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Cystm1Q8K353 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Cystm1Q8K353 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Cystm1Q8K353 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
Cystm1Q8K353 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC10.06□□□□□ -0.8
Cystm1Q8K353 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC10.06□□□□□ -0.8
Cystm1Q8K353 Gm37055-201ENSMUST00000191866 133 ntBASIC10.06□□□□□ -0.8
Cystm1Q8K353 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC10.06□□□□□ -0.8
Cystm1Q8K353 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Cystm1Q8K353 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC10.06□□□□□ -0.8
Cystm1Q8K353 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Cystm1Q8K353 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC10.06□□□□□ -0.8
Cystm1Q8K353 Gm18025-201ENSMUST00000221733 862 ntBASIC10.06□□□□□ -0.8
Cystm1Q8K353 Odf3b-204ENSMUST00000227834 930 ntBASIC10.06□□□□□ -0.8
Cystm1Q8K353 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Cystm1Q8K353 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
Cystm1Q8K353 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Cystm1Q8K353 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Cystm1Q8K353 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Cystm1Q8K353 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Cystm1Q8K353 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC10.06□□□□□ -0.8
Cystm1Q8K353 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Cystm1Q8K353 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Cystm1Q8K353 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Cystm1Q8K353 Ntrk2-209ENSMUST00000225950 2640 ntBASIC10.06□□□□□ -0.8
Cystm1Q8K353 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Cystm1Q8K353 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Cystm1Q8K353 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC10.06□□□□□ -0.8
Cystm1Q8K353 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
Cystm1Q8K353 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Cystm1Q8K353 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
Cystm1Q8K353 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Cystm1Q8K353 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Cystm1Q8K353 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Cystm1Q8K353 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC10.06□□□□□ -0.8
Cystm1Q8K353 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Cystm1Q8K353 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Cystm1Q8K353 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC10.06□□□□□ -0.8
Cystm1Q8K353 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Cystm1Q8K353 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Cystm1Q8K353 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Cystm1Q8K353 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Cystm1Q8K353 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Cystm1Q8K353 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Cystm1Q8K353 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Cystm1Q8K353 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Cystm1Q8K353 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Cystm1Q8K353 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Cystm1Q8K353 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Cystm1Q8K353 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Cystm1Q8K353 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Cystm1Q8K353 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Cystm1Q8K353 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Cystm1Q8K353 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC10.05□□□□□ -0.8
Cystm1Q8K353 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Cystm1Q8K353 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Cystm1Q8K353 Gm11643-201ENSMUST00000119578 864 ntBASIC10.05□□□□□ -0.8
Cystm1Q8K353 Gm13836-201ENSMUST00000121159 501 ntBASIC10.05□□□□□ -0.8
Cystm1Q8K353 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC10.05□□□□□ -0.8
Cystm1Q8K353 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Cystm1Q8K353 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Cystm1Q8K353 Mir5122-201ENSMUST00000175004 89 ntBASIC10.05□□□□□ -0.8
Cystm1Q8K353 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC10.05□□□□□ -0.8
Cystm1Q8K353 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC10.05□□□□□ -0.8
Cystm1Q8K353 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Cystm1Q8K353 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Cystm1Q8K353 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Cystm1Q8K353 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Cystm1Q8K353 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Cystm1Q8K353 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
Cystm1Q8K353 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Cystm1Q8K353 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Cystm1Q8K353 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Cystm1Q8K353 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Cystm1Q8K353 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Cystm1Q8K353 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC10.05□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms