Protein–RNA interactions for Protein: Q8K0S5

Rtn4rl1, Reticulon-4 receptor-like 1, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4rl1Q8K0S5 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rtn4rl1Q8K0S5 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rtn4rl1Q8K0S5 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC16.07■□□□□ 0.16
Rtn4rl1Q8K0S5 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC16.07■□□□□ 0.16
Rtn4rl1Q8K0S5 Gm27494-201ENSMUST00000184735 189 ntBASIC16.07■□□□□ 0.16
Rtn4rl1Q8K0S5 Gm44872-201ENSMUST00000207864 420 ntBASIC16.07■□□□□ 0.16
Rtn4rl1Q8K0S5 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rtn4rl1Q8K0S5 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rtn4rl1Q8K0S5 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Rtn4rl1Q8K0S5 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Rtn4rl1Q8K0S5 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Rtn4rl1Q8K0S5 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Rtn4rl1Q8K0S5 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rtn4rl1Q8K0S5 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Rtn4rl1Q8K0S5 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rtn4rl1Q8K0S5 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rtn4rl1Q8K0S5 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Rtn4rl1Q8K0S5 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rtn4rl1Q8K0S5 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rtn4rl1Q8K0S5 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Rtn4rl1Q8K0S5 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rtn4rl1Q8K0S5 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rtn4rl1Q8K0S5 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rtn4rl1Q8K0S5 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rtn4rl1Q8K0S5 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC16.06■□□□□ 0.16
Rtn4rl1Q8K0S5 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC16.06■□□□□ 0.16
Rtn4rl1Q8K0S5 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC16.06■□□□□ 0.16
Rtn4rl1Q8K0S5 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rtn4rl1Q8K0S5 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rtn4rl1Q8K0S5 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Rtn4rl1Q8K0S5 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rtn4rl1Q8K0S5 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rtn4rl1Q8K0S5 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rtn4rl1Q8K0S5 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rtn4rl1Q8K0S5 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rtn4rl1Q8K0S5 Gm6598-201ENSMUST00000202719 2615 ntBASIC16.06■□□□□ 0.16
Rtn4rl1Q8K0S5 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rtn4rl1Q8K0S5 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rtn4rl1Q8K0S5 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rtn4rl1Q8K0S5 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rtn4rl1Q8K0S5 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rtn4rl1Q8K0S5 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rtn4rl1Q8K0S5 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rtn4rl1Q8K0S5 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rtn4rl1Q8K0S5 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Rtn4rl1Q8K0S5 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rtn4rl1Q8K0S5 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rtn4rl1Q8K0S5 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC16.05■□□□□ 0.16
Rtn4rl1Q8K0S5 Mir1895-201ENSMUST00000122615 79 ntBASIC16.05■□□□□ 0.16
Rtn4rl1Q8K0S5 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC16.05■□□□□ 0.16
Rtn4rl1Q8K0S5 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
Rtn4rl1Q8K0S5 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Rtn4rl1Q8K0S5 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rtn4rl1Q8K0S5 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Rtn4rl1Q8K0S5 Gm5177-201ENSMUST00000183092 997 ntBASIC16.05■□□□□ 0.16
Rtn4rl1Q8K0S5 Mir7036b-201ENSMUST00000184791 63 ntBASIC16.05■□□□□ 0.16
Rtn4rl1Q8K0S5 Gm37171-201ENSMUST00000192636 1185 ntBASIC16.05■□□□□ 0.16
Rtn4rl1Q8K0S5 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC16.05■□□□□ 0.16
Rtn4rl1Q8K0S5 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rtn4rl1Q8K0S5 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rtn4rl1Q8K0S5 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rtn4rl1Q8K0S5 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rtn4rl1Q8K0S5 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Rtn4rl1Q8K0S5 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rtn4rl1Q8K0S5 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Rtn4rl1Q8K0S5 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rtn4rl1Q8K0S5 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Rtn4rl1Q8K0S5 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC16.05■□□□□ 0.16
Rtn4rl1Q8K0S5 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rtn4rl1Q8K0S5 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rtn4rl1Q8K0S5 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rtn4rl1Q8K0S5 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rtn4rl1Q8K0S5 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rtn4rl1Q8K0S5 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Rtn4rl1Q8K0S5 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
Rtn4rl1Q8K0S5 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Rtn4rl1Q8K0S5 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rtn4rl1Q8K0S5 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Rtn4rl1Q8K0S5 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC16.04■□□□□ 0.16
Rtn4rl1Q8K0S5 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rtn4rl1Q8K0S5 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC16.04■□□□□ 0.16
Rtn4rl1Q8K0S5 Gm13365-201ENSMUST00000121188 973 ntBASIC16.04■□□□□ 0.16
Rtn4rl1Q8K0S5 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Rtn4rl1Q8K0S5 Mir6956-201ENSMUST00000183598 62 ntBASIC16.04■□□□□ 0.16
Rtn4rl1Q8K0S5 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC16.04■□□□□ 0.16
Rtn4rl1Q8K0S5 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Rtn4rl1Q8K0S5 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rtn4rl1Q8K0S5 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rtn4rl1Q8K0S5 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rtn4rl1Q8K0S5 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rtn4rl1Q8K0S5 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC16.04■□□□□ 0.16
Rtn4rl1Q8K0S5 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rtn4rl1Q8K0S5 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Rtn4rl1Q8K0S5 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rtn4rl1Q8K0S5 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rtn4rl1Q8K0S5 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rtn4rl1Q8K0S5 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Rtn4rl1Q8K0S5 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC16.03■□□□□ 0.16
Rtn4rl1Q8K0S5 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rtn4rl1Q8K0S5 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 46 ms