Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Ccdc38Q8CDN8 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ccdc38Q8CDN8 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Ccdc38Q8CDN8 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC17.77■□□□□ 0.44
Ccdc38Q8CDN8 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Ccdc38Q8CDN8 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Ccdc38Q8CDN8 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Ccdc38Q8CDN8 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ccdc38Q8CDN8 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ccdc38Q8CDN8 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ccdc38Q8CDN8 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ccdc38Q8CDN8 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ccdc38Q8CDN8 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ccdc38Q8CDN8 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Ccdc38Q8CDN8 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Ccdc38Q8CDN8 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Ccdc38Q8CDN8 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Ccdc38Q8CDN8 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ccdc38Q8CDN8 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ccdc38Q8CDN8 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ccdc38Q8CDN8 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ccdc38Q8CDN8 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ccdc38Q8CDN8 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ccdc38Q8CDN8 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ccdc38Q8CDN8 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC17.76■□□□□ 0.43
Ccdc38Q8CDN8 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ccdc38Q8CDN8 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ccdc38Q8CDN8 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ccdc38Q8CDN8 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC17.76■□□□□ 0.43
Ccdc38Q8CDN8 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC17.76■□□□□ 0.43
Ccdc38Q8CDN8 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC17.76■□□□□ 0.43
Ccdc38Q8CDN8 CT009713.7-201ENSMUST00000224689 571 ntBASIC17.76■□□□□ 0.43
Ccdc38Q8CDN8 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Ccdc38Q8CDN8 Gm16011-201ENSMUST00000121567 2662 ntBASIC17.76■□□□□ 0.43
Ccdc38Q8CDN8 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ccdc38Q8CDN8 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ccdc38Q8CDN8 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Ccdc38Q8CDN8 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ccdc38Q8CDN8 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ccdc38Q8CDN8 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ccdc38Q8CDN8 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC17.76■□□□□ 0.43
Ccdc38Q8CDN8 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Ccdc38Q8CDN8 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Ccdc38Q8CDN8 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ccdc38Q8CDN8 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
Ccdc38Q8CDN8 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Ccdc38Q8CDN8 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ccdc38Q8CDN8 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC17.75■□□□□ 0.43
Ccdc38Q8CDN8 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC17.75■□□□□ 0.43
Ccdc38Q8CDN8 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Ccdc38Q8CDN8 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC17.75■□□□□ 0.43
Ccdc38Q8CDN8 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ccdc38Q8CDN8 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ccdc38Q8CDN8 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Ccdc38Q8CDN8 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Ccdc38Q8CDN8 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Ccdc38Q8CDN8 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Ccdc38Q8CDN8 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Ccdc38Q8CDN8 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC17.75■□□□□ 0.43
Ccdc38Q8CDN8 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ccdc38Q8CDN8 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Ccdc38Q8CDN8 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Ccdc38Q8CDN8 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Ccdc38Q8CDN8 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Ccdc38Q8CDN8 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ccdc38Q8CDN8 Gm44616-201ENSMUST00000206417 1732 ntBASIC17.75■□□□□ 0.43
Ccdc38Q8CDN8 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ccdc38Q8CDN8 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC17.75■□□□□ 0.43
Ccdc38Q8CDN8 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ccdc38Q8CDN8 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Ccdc38Q8CDN8 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ccdc38Q8CDN8 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ccdc38Q8CDN8 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ccdc38Q8CDN8 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC17.74■□□□□ 0.43
Ccdc38Q8CDN8 Gm38327-201ENSMUST00000195852 1755 ntBASIC17.74■□□□□ 0.43
Ccdc38Q8CDN8 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ccdc38Q8CDN8 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ccdc38Q8CDN8 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC17.74■□□□□ 0.43
Ccdc38Q8CDN8 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ccdc38Q8CDN8 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Ccdc38Q8CDN8 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Ccdc38Q8CDN8 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Ccdc38Q8CDN8 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Ccdc38Q8CDN8 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ccdc38Q8CDN8 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Ccdc38Q8CDN8 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ccdc38Q8CDN8 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ccdc38Q8CDN8 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ccdc38Q8CDN8 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ccdc38Q8CDN8 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Ccdc38Q8CDN8 Ccdc166-201ENSMUST00000182172 2584 ntBASIC17.74■□□□□ 0.43
Ccdc38Q8CDN8 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Ccdc38Q8CDN8 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ccdc38Q8CDN8 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Ccdc38Q8CDN8 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Ccdc38Q8CDN8 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ccdc38Q8CDN8 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ccdc38Q8CDN8 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Ccdc38Q8CDN8 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ccdc38Q8CDN8 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms