Protein–RNA interactions for Protein: Q8C2S0

Usp44, Ubiquitin carboxyl-terminal hydrolase 44, mousemouse

Predictions only

Length 711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp44Q8C2S0 Gm4575-201ENSMUST00000182991 1002 ntBASIC18.68■□□□□ 0.58
Usp44Q8C2S0 Gm8709-201ENSMUST00000183230 1012 ntBASIC18.68■□□□□ 0.58
Usp44Q8C2S0 Gm34391-201ENSMUST00000203706 907 ntBASIC18.68■□□□□ 0.58
Usp44Q8C2S0 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC18.68■□□□□ 0.58
Usp44Q8C2S0 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Usp44Q8C2S0 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Usp44Q8C2S0 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Usp44Q8C2S0 Gm10293-201ENSMUST00000076317 1002 ntBASIC18.68■□□□□ 0.58
Usp44Q8C2S0 Gm6316-201ENSMUST00000082064 1020 ntBASIC18.68■□□□□ 0.58
Usp44Q8C2S0 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC18.68■□□□□ 0.58
Usp44Q8C2S0 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Usp44Q8C2S0 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Usp44Q8C2S0 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Usp44Q8C2S0 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Usp44Q8C2S0 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC18.68■□□□□ 0.58
Usp44Q8C2S0 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Usp44Q8C2S0 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Usp44Q8C2S0 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Usp44Q8C2S0 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Usp44Q8C2S0 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
Usp44Q8C2S0 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Usp44Q8C2S0 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Usp44Q8C2S0 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Usp44Q8C2S0 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Usp44Q8C2S0 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC18.67■□□□□ 0.58
Usp44Q8C2S0 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Usp44Q8C2S0 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Usp44Q8C2S0 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC18.67■□□□□ 0.58
Usp44Q8C2S0 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Usp44Q8C2S0 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Usp44Q8C2S0 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Usp44Q8C2S0 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC18.67■□□□□ 0.58
Usp44Q8C2S0 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC18.67■□□□□ 0.58
Usp44Q8C2S0 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC18.67■□□□□ 0.58
Usp44Q8C2S0 Ccdc166-201ENSMUST00000182172 2584 ntBASIC18.67■□□□□ 0.58
Usp44Q8C2S0 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Usp44Q8C2S0 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Usp44Q8C2S0 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Usp44Q8C2S0 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Usp44Q8C2S0 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Usp44Q8C2S0 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Usp44Q8C2S0 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Usp44Q8C2S0 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC18.66■□□□□ 0.58
Usp44Q8C2S0 App-207ENSMUST00000227737 2827 ntBASIC18.66■□□□□ 0.58
Usp44Q8C2S0 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Usp44Q8C2S0 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Usp44Q8C2S0 Gm4459-201ENSMUST00000118750 468 ntBASIC18.66■□□□□ 0.58
Usp44Q8C2S0 Gm12644-201ENSMUST00000119935 606 ntBASIC18.66■□□□□ 0.58
Usp44Q8C2S0 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Usp44Q8C2S0 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Usp44Q8C2S0 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Usp44Q8C2S0 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Usp44Q8C2S0 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Usp44Q8C2S0 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Usp44Q8C2S0 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Usp44Q8C2S0 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Usp44Q8C2S0 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC18.66■□□□□ 0.58
Usp44Q8C2S0 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Usp44Q8C2S0 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Usp44Q8C2S0 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Usp44Q8C2S0 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Usp44Q8C2S0 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Usp44Q8C2S0 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Usp44Q8C2S0 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Usp44Q8C2S0 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Usp44Q8C2S0 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Usp44Q8C2S0 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
Usp44Q8C2S0 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC18.65■□□□□ 0.58
Usp44Q8C2S0 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Usp44Q8C2S0 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Usp44Q8C2S0 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Usp44Q8C2S0 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC18.65■□□□□ 0.58
Usp44Q8C2S0 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC18.65■□□□□ 0.58
Usp44Q8C2S0 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC18.65■□□□□ 0.58
Usp44Q8C2S0 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Usp44Q8C2S0 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC18.65■□□□□ 0.58
Usp44Q8C2S0 AC160338.1-201ENSMUST00000214232 705 ntBASIC18.65■□□□□ 0.58
Usp44Q8C2S0 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Usp44Q8C2S0 Birc2-201ENSMUST00000054878 378 ntBASIC18.65■□□□□ 0.58
Usp44Q8C2S0 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Usp44Q8C2S0 Spr-ps1-201ENSMUST00000089584 605 ntBASIC18.65■□□□□ 0.58
Usp44Q8C2S0 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Usp44Q8C2S0 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Usp44Q8C2S0 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Usp44Q8C2S0 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Usp44Q8C2S0 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Usp44Q8C2S0 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.58
Usp44Q8C2S0 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Usp44Q8C2S0 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Usp44Q8C2S0 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Usp44Q8C2S0 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Usp44Q8C2S0 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Usp44Q8C2S0 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Usp44Q8C2S0 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Usp44Q8C2S0 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Usp44Q8C2S0 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Usp44Q8C2S0 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC18.64■□□□□ 0.57
Usp44Q8C2S0 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
Usp44Q8C2S0 Cmtm5-203ENSMUST00000227441 610 ntBASIC18.64■□□□□ 0.57
Usp44Q8C2S0 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms