Protein–RNA interactions for Protein: Q8C2A2

Tsen54, tRNA-splicing endonuclease subunit Sen54, mousemouse

Predictions only

Length 525 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tsen54Q8C2A2 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Tsen54Q8C2A2 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Tsen54Q8C2A2 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Tsen54Q8C2A2 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Tsen54Q8C2A2 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Tsen54Q8C2A2 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC13.4□□□□□ -0.26
Tsen54Q8C2A2 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Tsen54Q8C2A2 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Tsen54Q8C2A2 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC13.4□□□□□ -0.26
Tsen54Q8C2A2 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC13.4□□□□□ -0.26
Tsen54Q8C2A2 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC13.4□□□□□ -0.26
Tsen54Q8C2A2 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC13.4□□□□□ -0.26
Tsen54Q8C2A2 Gm10252-201ENSMUST00000209541 832 ntBASIC13.4□□□□□ -0.26
Tsen54Q8C2A2 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Tsen54Q8C2A2 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Tsen54Q8C2A2 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Tsen54Q8C2A2 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Tsen54Q8C2A2 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Tsen54Q8C2A2 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Tsen54Q8C2A2 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Tsen54Q8C2A2 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Tsen54Q8C2A2 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Tsen54Q8C2A2 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Tsen54Q8C2A2 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tsen54Q8C2A2 Gm45605-201ENSMUST00000210265 4269 ntBASIC13.39□□□□□ -0.27
Tsen54Q8C2A2 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tsen54Q8C2A2 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tsen54Q8C2A2 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tsen54Q8C2A2 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tsen54Q8C2A2 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tsen54Q8C2A2 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tsen54Q8C2A2 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tsen54Q8C2A2 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC13.39□□□□□ -0.27
Tsen54Q8C2A2 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tsen54Q8C2A2 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tsen54Q8C2A2 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tsen54Q8C2A2 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tsen54Q8C2A2 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC13.39□□□□□ -0.27
Tsen54Q8C2A2 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC13.39□□□□□ -0.27
Tsen54Q8C2A2 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Tsen54Q8C2A2 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Tsen54Q8C2A2 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Tsen54Q8C2A2 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC13.39□□□□□ -0.27
Tsen54Q8C2A2 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC13.39□□□□□ -0.27
Tsen54Q8C2A2 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tsen54Q8C2A2 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC13.39□□□□□ -0.27
Tsen54Q8C2A2 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tsen54Q8C2A2 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Tsen54Q8C2A2 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Tsen54Q8C2A2 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tsen54Q8C2A2 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Tsen54Q8C2A2 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tsen54Q8C2A2 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tsen54Q8C2A2 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Tsen54Q8C2A2 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tsen54Q8C2A2 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tsen54Q8C2A2 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Tsen54Q8C2A2 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC13.38□□□□□ -0.27
Tsen54Q8C2A2 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Tsen54Q8C2A2 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Tsen54Q8C2A2 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC13.38□□□□□ -0.27
Tsen54Q8C2A2 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC13.38□□□□□ -0.27
Tsen54Q8C2A2 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Tsen54Q8C2A2 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Tsen54Q8C2A2 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Tsen54Q8C2A2 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Tsen54Q8C2A2 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC13.38□□□□□ -0.27
Tsen54Q8C2A2 Gm10517-202ENSMUST00000192970 758 ntBASIC13.38□□□□□ -0.27
Tsen54Q8C2A2 Gm4974-201ENSMUST00000209974 875 ntBASIC13.38□□□□□ -0.27
Tsen54Q8C2A2 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC13.38□□□□□ -0.27
Tsen54Q8C2A2 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC13.38□□□□□ -0.27
Tsen54Q8C2A2 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Tsen54Q8C2A2 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Tsen54Q8C2A2 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Tsen54Q8C2A2 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
Tsen54Q8C2A2 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Tsen54Q8C2A2 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Tsen54Q8C2A2 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC13.38□□□□□ -0.27
Tsen54Q8C2A2 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Tsen54Q8C2A2 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Tsen54Q8C2A2 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Tsen54Q8C2A2 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Tsen54Q8C2A2 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Tsen54Q8C2A2 Gm7712-202ENSMUST00000222331 1510 ntBASIC13.38□□□□□ -0.27
Tsen54Q8C2A2 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Tsen54Q8C2A2 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
Tsen54Q8C2A2 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC13.38□□□□□ -0.27
Tsen54Q8C2A2 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Tsen54Q8C2A2 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Tsen54Q8C2A2 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Tsen54Q8C2A2 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC13.38□□□□□ -0.27
Tsen54Q8C2A2 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Tsen54Q8C2A2 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Tsen54Q8C2A2 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Tsen54Q8C2A2 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Tsen54Q8C2A2 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Tsen54Q8C2A2 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Tsen54Q8C2A2 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Tsen54Q8C2A2 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Tsen54Q8C2A2 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms