Protein–RNA interactions for Protein: Q8C196

Cps1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, mousemouse

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cps1Q8C196 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Cps1Q8C196 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Cps1Q8C196 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Cps1Q8C196 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Cps1Q8C196 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC21.36■■□□□ 1.01
Cps1Q8C196 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
Cps1Q8C196 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
Cps1Q8C196 Gm7336-201ENSMUST00000107041 1232 ntBASIC21.35■■□□□ 1.01
Cps1Q8C196 Gm11453-201ENSMUST00000117318 1007 ntBASIC21.35■■□□□ 1.01
Cps1Q8C196 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Cps1Q8C196 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Cps1Q8C196 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Cps1Q8C196 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC21.35■■□□□ 1.01
Cps1Q8C196 AC166341.4-201ENSMUST00000220625 123 ntBASIC21.35■■□□□ 1.01
Cps1Q8C196 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Cps1Q8C196 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Cps1Q8C196 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Cps1Q8C196 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC21.35■■□□□ 1.01
Cps1Q8C196 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC21.35■■□□□ 1.01
Cps1Q8C196 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Cps1Q8C196 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
Cps1Q8C196 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC21.35■■□□□ 1.01
Cps1Q8C196 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Cps1Q8C196 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Cps1Q8C196 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Cps1Q8C196 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Cps1Q8C196 Gm13410-201ENSMUST00000117058 1415 ntBASIC21.34■■□□□ 1.01
Cps1Q8C196 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Cps1Q8C196 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Cps1Q8C196 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Cps1Q8C196 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Cps1Q8C196 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
Cps1Q8C196 Gm12428-201ENSMUST00000119844 727 ntBASIC21.34■■□□□ 1.01
Cps1Q8C196 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC21.34■■□□□ 1.01
Cps1Q8C196 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC21.34■■□□□ 1.01
Cps1Q8C196 Gm23547-201ENSMUST00000158210 271 ntBASIC21.34■■□□□ 1.01
Cps1Q8C196 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC21.34■■□□□ 1.01
Cps1Q8C196 AC131710.1-201ENSMUST00000228336 990 ntBASIC21.34■■□□□ 1.01
Cps1Q8C196 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Cps1Q8C196 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Cps1Q8C196 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Cps1Q8C196 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
Cps1Q8C196 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Cps1Q8C196 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Cps1Q8C196 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC21.33■■□□□ 1
Cps1Q8C196 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC21.33■■□□□ 1
Cps1Q8C196 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Cps1Q8C196 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC21.33■■□□□ 1
Cps1Q8C196 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Cps1Q8C196 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC21.32■■□□□ 1
Cps1Q8C196 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC21.32■■□□□ 1
Cps1Q8C196 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Cps1Q8C196 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC21.32■■□□□ 1
Cps1Q8C196 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC21.32■■□□□ 1
Cps1Q8C196 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC21.32■■□□□ 1
Cps1Q8C196 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Cps1Q8C196 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Cps1Q8C196 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC21.32■■□□□ 1
Cps1Q8C196 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC21.32■■□□□ 1
Cps1Q8C196 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Cps1Q8C196 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC21.32■■□□□ 1
Cps1Q8C196 AC025913.2-201ENSMUST00000220136 1766 ntBASIC21.32■■□□□ 1
Cps1Q8C196 Rarb-207ENSMUST00000225921 2756 ntBASIC21.32■■□□□ 1
Cps1Q8C196 CT030684.1-201ENSMUST00000227292 914 ntBASIC21.32■■□□□ 1
Cps1Q8C196 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Cps1Q8C196 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Cps1Q8C196 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Cps1Q8C196 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Cps1Q8C196 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Cps1Q8C196 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Cps1Q8C196 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Cps1Q8C196 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
Cps1Q8C196 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC21.32■■□□□ 1
Cps1Q8C196 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC21.32■■□□□ 1
Cps1Q8C196 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC21.31■■□□□ 1
Cps1Q8C196 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC21.31■■□□□ 1
Cps1Q8C196 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
Cps1Q8C196 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC21.31■■□□□ 1
Cps1Q8C196 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC21.31■■□□□ 1
Cps1Q8C196 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC21.31■■□□□ 1
Cps1Q8C196 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
Cps1Q8C196 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC21.31■■□□□ 1
Cps1Q8C196 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
Cps1Q8C196 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Cps1Q8C196 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Cps1Q8C196 Gm5898-201ENSMUST00000121016 2071 ntBASIC21.31■■□□□ 1
Cps1Q8C196 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC21.31■■□□□ 1
Cps1Q8C196 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC21.31■■□□□ 1
Cps1Q8C196 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC21.31■■□□□ 1
Cps1Q8C196 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
Cps1Q8C196 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
Cps1Q8C196 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Cps1Q8C196 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC21.31■■□□□ 1
Cps1Q8C196 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC21.31■■□□□ 1
Cps1Q8C196 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Cps1Q8C196 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Cps1Q8C196 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC21.3■■□□□ 1
Cps1Q8C196 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC21.3■■□□□ 1
Cps1Q8C196 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
Cps1Q8C196 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC21.3■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms