Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trub1Q8C0D0 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trub1Q8C0D0 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trub1Q8C0D0 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trub1Q8C0D0 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trub1Q8C0D0 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trub1Q8C0D0 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC16.48■□□□□ 0.23
Trub1Q8C0D0 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
Trub1Q8C0D0 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
Trub1Q8C0D0 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Trub1Q8C0D0 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trub1Q8C0D0 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trub1Q8C0D0 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trub1Q8C0D0 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Trub1Q8C0D0 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trub1Q8C0D0 Prob1-201ENSMUST00000097619 3021 ntBASIC16.48■□□□□ 0.23
Trub1Q8C0D0 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trub1Q8C0D0 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
Trub1Q8C0D0 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trub1Q8C0D0 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC16.47■□□□□ 0.23
Trub1Q8C0D0 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC16.47■□□□□ 0.23
Trub1Q8C0D0 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Trub1Q8C0D0 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Trub1Q8C0D0 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Trub1Q8C0D0 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Trub1Q8C0D0 Gm27704-201ENSMUST00000185094 107 ntBASIC16.47■□□□□ 0.23
Trub1Q8C0D0 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Trub1Q8C0D0 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC16.47■□□□□ 0.23
Trub1Q8C0D0 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trub1Q8C0D0 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trub1Q8C0D0 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trub1Q8C0D0 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Trub1Q8C0D0 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trub1Q8C0D0 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Trub1Q8C0D0 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trub1Q8C0D0 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trub1Q8C0D0 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Trub1Q8C0D0 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trub1Q8C0D0 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trub1Q8C0D0 Wnt10b-206ENSMUST00000228546 2709 ntBASIC16.46■□□□□ 0.23
Trub1Q8C0D0 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Trub1Q8C0D0 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trub1Q8C0D0 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trub1Q8C0D0 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC16.46■□□□□ 0.23
Trub1Q8C0D0 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC16.46■□□□□ 0.23
Trub1Q8C0D0 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Trub1Q8C0D0 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trub1Q8C0D0 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trub1Q8C0D0 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trub1Q8C0D0 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Trub1Q8C0D0 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trub1Q8C0D0 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trub1Q8C0D0 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trub1Q8C0D0 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Trub1Q8C0D0 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Trub1Q8C0D0 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Trub1Q8C0D0 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Trub1Q8C0D0 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Trub1Q8C0D0 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trub1Q8C0D0 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Trub1Q8C0D0 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Trub1Q8C0D0 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Trub1Q8C0D0 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trub1Q8C0D0 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trub1Q8C0D0 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trub1Q8C0D0 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trub1Q8C0D0 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trub1Q8C0D0 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC16.45■□□□□ 0.22
Trub1Q8C0D0 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC16.45■□□□□ 0.22
Trub1Q8C0D0 Gm1818-201ENSMUST00000169406 1184 ntBASIC16.45■□□□□ 0.22
Trub1Q8C0D0 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Trub1Q8C0D0 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Trub1Q8C0D0 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC16.45■□□□□ 0.22
Trub1Q8C0D0 Gm33142-201ENSMUST00000193913 867 ntBASIC16.45■□□□□ 0.22
Trub1Q8C0D0 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trub1Q8C0D0 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trub1Q8C0D0 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trub1Q8C0D0 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Trub1Q8C0D0 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trub1Q8C0D0 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trub1Q8C0D0 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Trub1Q8C0D0 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trub1Q8C0D0 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Trub1Q8C0D0 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Trub1Q8C0D0 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Trub1Q8C0D0 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trub1Q8C0D0 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Trub1Q8C0D0 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC16.45■□□□□ 0.22
Trub1Q8C0D0 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trub1Q8C0D0 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trub1Q8C0D0 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trub1Q8C0D0 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trub1Q8C0D0 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Trub1Q8C0D0 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trub1Q8C0D0 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC16.44■□□□□ 0.22
Trub1Q8C0D0 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trub1Q8C0D0 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC16.44■□□□□ 0.22
Trub1Q8C0D0 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trub1Q8C0D0 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trub1Q8C0D0 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms