Protein–RNA interactions for Protein: Q8BXJ2

Trerf1, Transcriptional-regulating factor 1, mousemouse

Predictions only

Length 1,205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trerf1Q8BXJ2 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trerf1Q8BXJ2 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Trerf1Q8BXJ2 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trerf1Q8BXJ2 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC16.87■□□□□ 0.29
Trerf1Q8BXJ2 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC16.87■□□□□ 0.29
Trerf1Q8BXJ2 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
Trerf1Q8BXJ2 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trerf1Q8BXJ2 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trerf1Q8BXJ2 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trerf1Q8BXJ2 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trerf1Q8BXJ2 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trerf1Q8BXJ2 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trerf1Q8BXJ2 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trerf1Q8BXJ2 Zfp264-201ENSMUST00000208656 1563 ntBASIC16.86■□□□□ 0.29
Trerf1Q8BXJ2 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trerf1Q8BXJ2 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Trerf1Q8BXJ2 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trerf1Q8BXJ2 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Trerf1Q8BXJ2 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Trerf1Q8BXJ2 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Trerf1Q8BXJ2 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trerf1Q8BXJ2 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Trerf1Q8BXJ2 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trerf1Q8BXJ2 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trerf1Q8BXJ2 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trerf1Q8BXJ2 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trerf1Q8BXJ2 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trerf1Q8BXJ2 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Trerf1Q8BXJ2 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trerf1Q8BXJ2 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trerf1Q8BXJ2 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Trerf1Q8BXJ2 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trerf1Q8BXJ2 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trerf1Q8BXJ2 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trerf1Q8BXJ2 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Trerf1Q8BXJ2 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trerf1Q8BXJ2 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trerf1Q8BXJ2 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trerf1Q8BXJ2 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Trerf1Q8BXJ2 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trerf1Q8BXJ2 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trerf1Q8BXJ2 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trerf1Q8BXJ2 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC16.85■□□□□ 0.29
Trerf1Q8BXJ2 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trerf1Q8BXJ2 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trerf1Q8BXJ2 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Trerf1Q8BXJ2 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC16.85■□□□□ 0.29
Trerf1Q8BXJ2 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trerf1Q8BXJ2 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Trerf1Q8BXJ2 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC16.85■□□□□ 0.29
Trerf1Q8BXJ2 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trerf1Q8BXJ2 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trerf1Q8BXJ2 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC16.85■□□□□ 0.29
Trerf1Q8BXJ2 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trerf1Q8BXJ2 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC16.84■□□□□ 0.29
Trerf1Q8BXJ2 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trerf1Q8BXJ2 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trerf1Q8BXJ2 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trerf1Q8BXJ2 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trerf1Q8BXJ2 Gm11860-201ENSMUST00000122346 1010 ntBASIC16.84■□□□□ 0.29
Trerf1Q8BXJ2 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC16.84■□□□□ 0.29
Trerf1Q8BXJ2 Gm29518-201ENSMUST00000190858 372 ntBASIC16.84■□□□□ 0.29
Trerf1Q8BXJ2 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trerf1Q8BXJ2 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trerf1Q8BXJ2 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC16.84■□□□□ 0.29
Trerf1Q8BXJ2 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
Trerf1Q8BXJ2 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trerf1Q8BXJ2 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trerf1Q8BXJ2 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trerf1Q8BXJ2 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trerf1Q8BXJ2 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trerf1Q8BXJ2 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trerf1Q8BXJ2 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trerf1Q8BXJ2 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trerf1Q8BXJ2 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trerf1Q8BXJ2 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trerf1Q8BXJ2 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trerf1Q8BXJ2 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Trerf1Q8BXJ2 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Trerf1Q8BXJ2 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trerf1Q8BXJ2 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trerf1Q8BXJ2 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Trerf1Q8BXJ2 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC16.84■□□□□ 0.29
Trerf1Q8BXJ2 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Trerf1Q8BXJ2 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC16.83■□□□□ 0.29
Trerf1Q8BXJ2 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Trerf1Q8BXJ2 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
Trerf1Q8BXJ2 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
Trerf1Q8BXJ2 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Trerf1Q8BXJ2 Mir770-201ENSMUST00000103252 94 ntBASIC16.83■□□□□ 0.28
Trerf1Q8BXJ2 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Trerf1Q8BXJ2 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC16.83■□□□□ 0.28
Trerf1Q8BXJ2 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trerf1Q8BXJ2 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trerf1Q8BXJ2 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trerf1Q8BXJ2 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trerf1Q8BXJ2 Gm8839-201ENSMUST00000121279 1645 ntBASIC16.83■□□□□ 0.28
Trerf1Q8BXJ2 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Trerf1Q8BXJ2 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trerf1Q8BXJ2 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms