Protein–RNA interactions for Protein: Q8BVL3

Snx17, Sorting nexin-17, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snx17Q8BVL3 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Snx17Q8BVL3 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Snx17Q8BVL3 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC17.66■□□□□ 0.42
Snx17Q8BVL3 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC17.66■□□□□ 0.42
Snx17Q8BVL3 AC093926.2-201ENSMUST00000214468 1228 ntBASIC17.66■□□□□ 0.42
Snx17Q8BVL3 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Snx17Q8BVL3 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Snx17Q8BVL3 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC17.66■□□□□ 0.42
Snx17Q8BVL3 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Snx17Q8BVL3 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Snx17Q8BVL3 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Snx17Q8BVL3 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Snx17Q8BVL3 Gm13332-201ENSMUST00000120451 1398 ntBASIC17.66■□□□□ 0.42
Snx17Q8BVL3 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Snx17Q8BVL3 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Snx17Q8BVL3 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Snx17Q8BVL3 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC17.65■□□□□ 0.42
Snx17Q8BVL3 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Snx17Q8BVL3 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Snx17Q8BVL3 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Snx17Q8BVL3 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Snx17Q8BVL3 Gm15427-201ENSMUST00000117288 531 ntBASIC17.65■□□□□ 0.42
Snx17Q8BVL3 Gm8344-201ENSMUST00000119813 856 ntBASIC17.65■□□□□ 0.42
Snx17Q8BVL3 Gm13365-201ENSMUST00000121188 973 ntBASIC17.65■□□□□ 0.42
Snx17Q8BVL3 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC17.65■□□□□ 0.42
Snx17Q8BVL3 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Snx17Q8BVL3 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Snx17Q8BVL3 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Snx17Q8BVL3 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Snx17Q8BVL3 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC17.65■□□□□ 0.42
Snx17Q8BVL3 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Snx17Q8BVL3 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Snx17Q8BVL3 Gm44335-201ENSMUST00000196879 141 ntBASIC17.65■□□□□ 0.42
Snx17Q8BVL3 Gm44297-201ENSMUST00000198304 141 ntBASIC17.65■□□□□ 0.42
Snx17Q8BVL3 Gm44346-201ENSMUST00000198851 141 ntBASIC17.65■□□□□ 0.42
Snx17Q8BVL3 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Snx17Q8BVL3 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Snx17Q8BVL3 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Snx17Q8BVL3 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Snx17Q8BVL3 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Snx17Q8BVL3 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Snx17Q8BVL3 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Snx17Q8BVL3 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Snx17Q8BVL3 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Snx17Q8BVL3 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Snx17Q8BVL3 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Snx17Q8BVL3 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Snx17Q8BVL3 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Snx17Q8BVL3 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Snx17Q8BVL3 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC17.65■□□□□ 0.42
Snx17Q8BVL3 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Snx17Q8BVL3 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
Snx17Q8BVL3 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Snx17Q8BVL3 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Snx17Q8BVL3 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Snx17Q8BVL3 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC17.64■□□□□ 0.41
Snx17Q8BVL3 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Snx17Q8BVL3 Gm11185-201ENSMUST00000117732 1007 ntBASIC17.64■□□□□ 0.41
Snx17Q8BVL3 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
Snx17Q8BVL3 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Snx17Q8BVL3 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC17.64■□□□□ 0.41
Snx17Q8BVL3 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Snx17Q8BVL3 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC17.64■□□□□ 0.41
Snx17Q8BVL3 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Snx17Q8BVL3 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Snx17Q8BVL3 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Snx17Q8BVL3 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC17.64■□□□□ 0.41
Snx17Q8BVL3 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Snx17Q8BVL3 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Snx17Q8BVL3 Best4-ps-201ENSMUST00000129783 1380 ntBASIC17.64■□□□□ 0.41
Snx17Q8BVL3 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Snx17Q8BVL3 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Snx17Q8BVL3 AC157650.3-201ENSMUST00000225058 1476 ntBASIC17.63■□□□□ 0.41
Snx17Q8BVL3 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Snx17Q8BVL3 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Snx17Q8BVL3 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Snx17Q8BVL3 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Snx17Q8BVL3 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Snx17Q8BVL3 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC17.63■□□□□ 0.41
Snx17Q8BVL3 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Snx17Q8BVL3 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Snx17Q8BVL3 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Snx17Q8BVL3 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Snx17Q8BVL3 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Snx17Q8BVL3 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Snx17Q8BVL3 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Snx17Q8BVL3 Gm15358-201ENSMUST00000119249 520 ntBASIC17.63■□□□□ 0.41
Snx17Q8BVL3 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
Snx17Q8BVL3 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC17.63■□□□□ 0.41
Snx17Q8BVL3 Gm45747-201ENSMUST00000212203 999 ntBASIC17.63■□□□□ 0.41
Snx17Q8BVL3 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Snx17Q8BVL3 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Snx17Q8BVL3 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Snx17Q8BVL3 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Snx17Q8BVL3 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC17.63■□□□□ 0.41
Snx17Q8BVL3 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Snx17Q8BVL3 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC17.63■□□□□ 0.41
Snx17Q8BVL3 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Snx17Q8BVL3 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Snx17Q8BVL3 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms