Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Col16a1Q8BLX7 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Col16a1Q8BLX7 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC20.82■□□□□ 0.92
Col16a1Q8BLX7 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Col16a1Q8BLX7 Mir449b-201ENSMUST00000104833 80 ntBASIC20.82■□□□□ 0.92
Col16a1Q8BLX7 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC20.82■□□□□ 0.92
Col16a1Q8BLX7 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC20.82■□□□□ 0.92
Col16a1Q8BLX7 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Col16a1Q8BLX7 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Col16a1Q8BLX7 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Col16a1Q8BLX7 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Col16a1Q8BLX7 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Col16a1Q8BLX7 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Col16a1Q8BLX7 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Col16a1Q8BLX7 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Col16a1Q8BLX7 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Col16a1Q8BLX7 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
Col16a1Q8BLX7 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Col16a1Q8BLX7 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
Col16a1Q8BLX7 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Col16a1Q8BLX7 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Col16a1Q8BLX7 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Col16a1Q8BLX7 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC20.81■□□□□ 0.92
Col16a1Q8BLX7 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Col16a1Q8BLX7 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Col16a1Q8BLX7 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC20.8■□□□□ 0.92
Col16a1Q8BLX7 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Col16a1Q8BLX7 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC20.8■□□□□ 0.92
Col16a1Q8BLX7 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC20.8■□□□□ 0.92
Col16a1Q8BLX7 Gm22175-201ENSMUST00000175007 78 ntBASIC20.8■□□□□ 0.92
Col16a1Q8BLX7 Gm27622-201ENSMUST00000183779 60 ntBASIC20.8■□□□□ 0.92
Col16a1Q8BLX7 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Col16a1Q8BLX7 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC20.8■□□□□ 0.92
Col16a1Q8BLX7 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Col16a1Q8BLX7 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC20.8■□□□□ 0.92
Col16a1Q8BLX7 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Col16a1Q8BLX7 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC20.8■□□□□ 0.92
Col16a1Q8BLX7 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Col16a1Q8BLX7 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Col16a1Q8BLX7 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Col16a1Q8BLX7 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
Col16a1Q8BLX7 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Col16a1Q8BLX7 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Col16a1Q8BLX7 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
Col16a1Q8BLX7 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Col16a1Q8BLX7 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC20.8■□□□□ 0.92
Col16a1Q8BLX7 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC20.8■□□□□ 0.92
Col16a1Q8BLX7 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC20.8■□□□□ 0.92
Col16a1Q8BLX7 Gpr146-202ENSMUST00000053120 1040 ntBASIC20.8■□□□□ 0.92
Col16a1Q8BLX7 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Col16a1Q8BLX7 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Col16a1Q8BLX7 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Col16a1Q8BLX7 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
Col16a1Q8BLX7 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Col16a1Q8BLX7 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Col16a1Q8BLX7 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Col16a1Q8BLX7 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Col16a1Q8BLX7 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC20.79■□□□□ 0.92
Col16a1Q8BLX7 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Col16a1Q8BLX7 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Col16a1Q8BLX7 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC20.79■□□□□ 0.92
Col16a1Q8BLX7 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC20.79■□□□□ 0.92
Col16a1Q8BLX7 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC20.79■□□□□ 0.92
Col16a1Q8BLX7 Nudt18-203ENSMUST00000228768 1578 ntBASIC20.79■□□□□ 0.92
Col16a1Q8BLX7 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC20.79■□□□□ 0.92
Col16a1Q8BLX7 Gm15635-204ENSMUST00000208024 2539 ntBASIC20.79■□□□□ 0.92
Col16a1Q8BLX7 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Col16a1Q8BLX7 AC154767.3-201ENSMUST00000225150 1342 ntBASIC20.78■□□□□ 0.92
Col16a1Q8BLX7 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Col16a1Q8BLX7 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Col16a1Q8BLX7 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Col16a1Q8BLX7 Gm7286-201ENSMUST00000182691 1007 ntBASIC20.78■□□□□ 0.92
Col16a1Q8BLX7 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Col16a1Q8BLX7 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC20.78■□□□□ 0.92
Col16a1Q8BLX7 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC20.78■□□□□ 0.92
Col16a1Q8BLX7 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC20.78■□□□□ 0.92
Col16a1Q8BLX7 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Col16a1Q8BLX7 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Col16a1Q8BLX7 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Col16a1Q8BLX7 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Col16a1Q8BLX7 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Col16a1Q8BLX7 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Col16a1Q8BLX7 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Col16a1Q8BLX7 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Col16a1Q8BLX7 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
Col16a1Q8BLX7 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Col16a1Q8BLX7 Gm23547-201ENSMUST00000158210 271 ntBASIC20.77■□□□□ 0.92
Col16a1Q8BLX7 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Col16a1Q8BLX7 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC20.77■□□□□ 0.92
Col16a1Q8BLX7 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Col16a1Q8BLX7 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC20.77■□□□□ 0.92
Col16a1Q8BLX7 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Col16a1Q8BLX7 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Col16a1Q8BLX7 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Col16a1Q8BLX7 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Col16a1Q8BLX7 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
Col16a1Q8BLX7 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Col16a1Q8BLX7 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.91
Col16a1Q8BLX7 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Col16a1Q8BLX7 Prkcz2-201ENSMUST00000206136 1756 ntBASIC20.77■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms