Protein–RNA interactions for Protein: Q80ZF2

Ifne, Interferon epsilon, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IfneQ80ZF2 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
IfneQ80ZF2 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
IfneQ80ZF2 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
IfneQ80ZF2 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
IfneQ80ZF2 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC15.25■□□□□ 0.03
IfneQ80ZF2 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
IfneQ80ZF2 AC153881.2-201ENSMUST00000214877 204 ntBASIC15.25■□□□□ 0.03
IfneQ80ZF2 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC15.25■□□□□ 0.03
IfneQ80ZF2 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
IfneQ80ZF2 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
IfneQ80ZF2 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
IfneQ80ZF2 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
IfneQ80ZF2 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
IfneQ80ZF2 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
IfneQ80ZF2 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
IfneQ80ZF2 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
IfneQ80ZF2 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
IfneQ80ZF2 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC15.24■□□□□ 0.03
IfneQ80ZF2 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
IfneQ80ZF2 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
IfneQ80ZF2 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
IfneQ80ZF2 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
IfneQ80ZF2 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
IfneQ80ZF2 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
IfneQ80ZF2 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
IfneQ80ZF2 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC15.24■□□□□ 0.03
IfneQ80ZF2 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC15.24■□□□□ 0.03
IfneQ80ZF2 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
IfneQ80ZF2 Gm43352-201ENSMUST00000196419 3065 ntBASIC15.24■□□□□ 0.03
IfneQ80ZF2 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
IfneQ80ZF2 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
IfneQ80ZF2 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
IfneQ80ZF2 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
IfneQ80ZF2 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
IfneQ80ZF2 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
IfneQ80ZF2 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
IfneQ80ZF2 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
IfneQ80ZF2 Gm44729-201ENSMUST00000206759 2052 ntBASIC15.24■□□□□ 0.03
IfneQ80ZF2 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
IfneQ80ZF2 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC15.24■□□□□ 0.03
IfneQ80ZF2 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
IfneQ80ZF2 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
IfneQ80ZF2 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
IfneQ80ZF2 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
IfneQ80ZF2 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
IfneQ80ZF2 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
IfneQ80ZF2 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
IfneQ80ZF2 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
IfneQ80ZF2 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
IfneQ80ZF2 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
IfneQ80ZF2 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
IfneQ80ZF2 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC15.23■□□□□ 0.03
IfneQ80ZF2 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
IfneQ80ZF2 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
IfneQ80ZF2 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
IfneQ80ZF2 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
IfneQ80ZF2 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
IfneQ80ZF2 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
IfneQ80ZF2 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
IfneQ80ZF2 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
IfneQ80ZF2 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
IfneQ80ZF2 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
IfneQ80ZF2 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC15.23■□□□□ 0.03
IfneQ80ZF2 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
IfneQ80ZF2 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
IfneQ80ZF2 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
IfneQ80ZF2 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
IfneQ80ZF2 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
IfneQ80ZF2 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
IfneQ80ZF2 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
IfneQ80ZF2 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
IfneQ80ZF2 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
IfneQ80ZF2 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC15.23■□□□□ 0.03
IfneQ80ZF2 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
IfneQ80ZF2 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC15.23■□□□□ 0.03
IfneQ80ZF2 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
IfneQ80ZF2 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC15.23■□□□□ 0.03
IfneQ80ZF2 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
IfneQ80ZF2 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
IfneQ80ZF2 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
IfneQ80ZF2 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
IfneQ80ZF2 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
IfneQ80ZF2 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
IfneQ80ZF2 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC15.22■□□□□ 0.03
IfneQ80ZF2 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
IfneQ80ZF2 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
IfneQ80ZF2 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC15.22■□□□□ 0.03
IfneQ80ZF2 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
IfneQ80ZF2 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
IfneQ80ZF2 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
IfneQ80ZF2 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC15.22■□□□□ 0.03
IfneQ80ZF2 Gm11539-201ENSMUST00000119837 557 ntBASIC15.22■□□□□ 0.03
IfneQ80ZF2 Gm13436-201ENSMUST00000120418 567 ntBASIC15.22■□□□□ 0.03
IfneQ80ZF2 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
IfneQ80ZF2 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC15.22■□□□□ 0.03
IfneQ80ZF2 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
IfneQ80ZF2 Gm43799-201ENSMUST00000201845 579 ntBASIC15.22■□□□□ 0.03
IfneQ80ZF2 Gm9731-201ENSMUST00000209480 747 ntBASIC15.22■□□□□ 0.03
IfneQ80ZF2 AC159205.6-201ENSMUST00000224935 887 ntBASIC15.22■□□□□ 0.03
IfneQ80ZF2 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms