Protein–RNA interactions for Protein: Q80YF6

Upk3b, Uroplakin-3b, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3bQ80YF6 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Upk3bQ80YF6 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Upk3bQ80YF6 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Upk3bQ80YF6 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC13.53□□□□□ -0.24
Upk3bQ80YF6 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Upk3bQ80YF6 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Upk3bQ80YF6 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Upk3bQ80YF6 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Upk3bQ80YF6 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC13.53□□□□□ -0.24
Upk3bQ80YF6 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Upk3bQ80YF6 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Upk3bQ80YF6 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Upk3bQ80YF6 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Upk3bQ80YF6 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Upk3bQ80YF6 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Upk3bQ80YF6 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Upk3bQ80YF6 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Upk3bQ80YF6 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Upk3bQ80YF6 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Upk3bQ80YF6 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Upk3bQ80YF6 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Upk3bQ80YF6 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Upk3bQ80YF6 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Upk3bQ80YF6 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Upk3bQ80YF6 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Upk3bQ80YF6 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Upk3bQ80YF6 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Upk3bQ80YF6 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Upk3bQ80YF6 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC13.52□□□□□ -0.24
Upk3bQ80YF6 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
Upk3bQ80YF6 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Upk3bQ80YF6 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
Upk3bQ80YF6 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Upk3bQ80YF6 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC13.52□□□□□ -0.25
Upk3bQ80YF6 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC13.52□□□□□ -0.25
Upk3bQ80YF6 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC13.52□□□□□ -0.25
Upk3bQ80YF6 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC13.52□□□□□ -0.25
Upk3bQ80YF6 Gm4217-201ENSMUST00000182243 1002 ntBASIC13.52□□□□□ -0.25
Upk3bQ80YF6 Gm21814-202ENSMUST00000203277 873 ntBASIC13.52□□□□□ -0.25
Upk3bQ80YF6 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC13.52□□□□□ -0.25
Upk3bQ80YF6 Slc35b2-207ENSMUST00000226086 850 ntBASIC13.52□□□□□ -0.25
Upk3bQ80YF6 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Upk3bQ80YF6 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC13.52□□□□□ -0.25
Upk3bQ80YF6 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Upk3bQ80YF6 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Upk3bQ80YF6 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Upk3bQ80YF6 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC13.52□□□□□ -0.25
Upk3bQ80YF6 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Upk3bQ80YF6 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Upk3bQ80YF6 Gm27528-202ENSMUST00000222916 2012 ntBASIC13.52□□□□□ -0.25
Upk3bQ80YF6 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Upk3bQ80YF6 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Upk3bQ80YF6 Gm37812-201ENSMUST00000195216 2475 ntBASIC13.52□□□□□ -0.25
Upk3bQ80YF6 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Upk3bQ80YF6 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Upk3bQ80YF6 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Upk3bQ80YF6 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Upk3bQ80YF6 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC13.52□□□□□ -0.25
Upk3bQ80YF6 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Upk3bQ80YF6 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Upk3bQ80YF6 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Upk3bQ80YF6 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Upk3bQ80YF6 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Upk3bQ80YF6 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Upk3bQ80YF6 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Upk3bQ80YF6 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Upk3bQ80YF6 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Upk3bQ80YF6 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Upk3bQ80YF6 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Upk3bQ80YF6 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC13.51□□□□□ -0.25
Upk3bQ80YF6 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Upk3bQ80YF6 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Upk3bQ80YF6 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Upk3bQ80YF6 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Upk3bQ80YF6 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC13.51□□□□□ -0.25
Upk3bQ80YF6 Gm11336-201ENSMUST00000118168 334 ntBASIC13.51□□□□□ -0.25
Upk3bQ80YF6 Gm13474-201ENSMUST00000122466 815 ntBASIC13.51□□□□□ -0.25
Upk3bQ80YF6 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC13.51□□□□□ -0.25
Upk3bQ80YF6 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC13.51□□□□□ -0.25
Upk3bQ80YF6 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Upk3bQ80YF6 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC13.51□□□□□ -0.25
Upk3bQ80YF6 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Upk3bQ80YF6 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Upk3bQ80YF6 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Upk3bQ80YF6 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Upk3bQ80YF6 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Upk3bQ80YF6 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Upk3bQ80YF6 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC13.5□□□□□ -0.25
Upk3bQ80YF6 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Upk3bQ80YF6 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC13.5□□□□□ -0.25
Upk3bQ80YF6 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Upk3bQ80YF6 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Upk3bQ80YF6 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Upk3bQ80YF6 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC13.5□□□□□ -0.25
Upk3bQ80YF6 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Upk3bQ80YF6 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Upk3bQ80YF6 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC13.5□□□□□ -0.25
Upk3bQ80YF6 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC13.5□□□□□ -0.25
Upk3bQ80YF6 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Upk3bQ80YF6 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms